Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00452 ATGGCTGTGCTGCTGAGAATGGCTCAGCCTCACAATGGCAACACTAGCAACACTGTCAACCAGGCTTTGGTGCTTCATGACTTTCTGGGCATGAAGCCAACCACTGATTCTCCCAAAACCACCGATGTAAGGTTGTCGGAACCGTCAGCCTCCGCCTCCTCCGCAGGTGGGCGTGGCCCTTTCTCTGCCACCTCTGACATCGCCTCTGAGAAGCAGGTAGGAAACCATCTTGAGGGAGTTCCTTTCTATGGCCCAAGGAGTGATCTTTCTGGTACTGAGATCAGTAACAGATTAGTGGGAAGCAAGAGAAGTAATTCTGATTCCGCTTTTACGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGATTCCTATCAAAATTCACATTTGATGAAGGTCCTCCGGAATGCAGCTGGAGGAGATAGGTCTAGAAGGCCCAGTGAGGATGAAGTGTTACTTGGTATGCAGTCAATGAAACAATCTTCTCAGATATTTCAGCCTCCCTCCAGCTCTAAGATTGATGCCAATAAGTGGGAACGATCTATTCTCATGAACGTTGGCCCTTTGCAGCATCCACCCCGTGGAGGGCAATTGACACCTTTTGTCCACCAAATGGCCTCAAGCAAGATAAGGGATACCAATGCTGGTCCTTCGTTCATCTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATCAAGGGCCCTGGAATTTTAAGTTCTATAAACGCAGCTGCTATGGGCACTGAGAAAACTCCATCTGCTGTGATGCTTGGTGGCAGCAGGCCAAAGGCTGGAAGTAATATCATAGAATCATCCACACCTCCAAGCAGTCAGCCTGCCCTAACTTCTGCCAGCCGTCAGATGACTATTTTTTATGGTGGCCAAGCTCATGTTTTTGATGATGTCCATCCTCATAAGGCAGATGTTATAATGGCTTTGGCCGGGTCAAATGGTGGATCTTGGTCCACTGCGTTCTCACCTAAATCTGCTGTAAAAATGGTTAATGATGGGAACTTGCACAGTGGAGAAAATGAAACAGGTGTAGTGAATAATGCAGCATTCCCTCAGGAGCTTCATGGGAAATTGTCTATTACTGGAAGTTCTAGCCATGCCATGGGGCCTGGTGATCGAGTAACTACTCCTGCAGGGGCACACCAAGGTAGCGTTTTTGCTAAAGATACCAGAAATCCACAACCATCAGATCCAAGTTCTGAAGACAAAAGAGGACAGTGA 1236 0.479 MAVLLRMAQPHNGNTSNTVNQALVLHDFLGMKPTTDSPKTTDVRLSEPSASASSAGGRGPFSATSDIASEKQVGNHLEGVPFYGPRSDLSGTEISNRLVGSKRSNSDSAFTGSSRDAFQMVPDSYQNSHLMKVLRNAAGGDRSRRPSEDEVLLGMQSMKQSSQIFQPPSSSKIDANKWERSILMNVGPLQHPPRGGQLTPFVHQMASSKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSINAAAMGTEKTPSAVMLGGSRPKAGSNIIESSTPPSSQPALTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSAVKMVNDGNLHSGENETGVVNNAAFPQELHGKLSITGSSSHAMGPGDRVTTPAGAHQGSVFAKDTRNPQPSDPSSEDKRGQ* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00452 411 SMART tify_2 282 317 IPR010399 -
Phac9g00452 411 MobiDBLite consensus disorder prediction 35 64 - -
Phac9g00452 411 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 90 356 IPR040390 -
Phac9g00452 411 MobiDBLite consensus disorder prediction 364 411 - -
Phac9g00452 411 Pfam tify domain 284 316 IPR010399 -
Phac9g00452 411 ProSiteProfiles Tify domain profile. 282 317 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00452 Phac-Chr9 2875331 2884695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00452 18 315 Tify Gene Family AT4G32570 41.905 1.10e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac9g00452 tify 2.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00452 - - gmx:100807222 700.279