Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00439 ATGGAAAGTGATGAACTGAGAGCGGCAAGTGCACGCATAGGGAGCTCCAGCGTGTGGAGAAGCAGTGGTGTTGATGTGTTTTCAGGGTCTTCAAGAAGAGATGATGATGAGGAAGAGCTTAAGTGGGCTGCTATTGAGAAACTCCCCACGTATCTACGCATGACTCGGGGCATTCTCACAGAGGCTGAAGGCCAACCTCCTACAGAGATTGATATAAACAAACTTTGTCCACTTCAGAGGAAGAACTTGGTGGAGAGGCTCGTCAAGATTGCGGAACAAGATAATGAGAAGTTCTTGTTCAAGTTAAGGGACCGCATTGATCGCGTTGGACTTGAAATTCCCACTATTGAAGTCCGTTTTGAGCACTTGAACGTTGAGGCAGAAGCTCATGTAGGAAGCAGAGCACTACCCACAATCTTTAACTTCTGCATTAATTTGTTGGAGGGGTTCCTCAGTTCTCTTCACCTTATTCCCAGTCGAAAGAAACCATTCACAGTTCTTGATGGTGTCAGTGGAATCATCAAGCCTAGAAGAATGACACTTCTTTTAGGCCCTCCAAGCTCTGGAAAGACCACATTATTGTTGGCACTGGCTGGAAGACTTGGGAAAGATCTAAAATTTTCGGGACGAGTTTCGTATAATGGTCGTGGGATGGAAGAATTTGTGCCTCAGAGAACATCAGCTTACATAAGTCAAACTGATCTACACATAGGAGAAATGACAGTGAGAGAAACATTGGCCTTTTCAGCAAGGTGTCAAGGGATTGGAACCCGTTATGAGATGCTGGCAGAACTGTCAAGAAGAGAGAAGGCTGAAAACATTAAGCCAGATCCTGATCTTGATATTTATATGAAGGCAGCAGCACTAGAAGGCCAAGAAACCAATGTGGTTACAGATTATATAATGAAGATTTTGGGACTAGAAGTTTGTGCGGATACCATGGTTGGGGATGACATGATTCGGGGTATTTCTGGCGGACAGAAGAAGAGAGTCACAACTGGTGAGATGCTAGTTGGACCGACAAGAGCACTTTTCATGGATGAAATTTCAACTGGTTTAGACAGTTCTACCACATTCCAAATGGTTAATTCTCTAAGACAATCTATCCACATTCTGAATGGAACAGCTGTGATCTCTCTTCTCCAGCCAGCACCAGAAACTTACGAGTTATTTGATGATATTATTCTCCTCTCAGATGGGCAAATTGTGTATCAGGGTCCAAGGGAAAATGTGCTTGAGTTCTTTGAATACATGGGGTTCAAATGTCCAGAGAGGAAAGGAGTAGCAGATTTTTTACAAGAAGTAACATCAAGAAAAGACCAAGAACAATATTGGGCAAATAAAGATGAGCCATACATCTTCATCACTGTTAGAGAGTTTGCTGAGGCATTTCAGTCATTTCACATTGGACGAAAACTTGGTGATGAACTTGCCACCCCATTTGACATGTCAAAAGGCCACCCTGCTGTGTTAACAAAGAACAAGTACGGTGTTAGCAAGAAGGAGCTCTTGAAAGCTTGCGTGTCCAGAGAATTCTTACTTATGAAAAGGAATTCGTTTGTCTATATTTTCAAGATGTGGCAATTGATTTTAACGGGGTTCATAACAATGACATTGTTCCTGAGAACTGAGATGCACCGGGATACAGAAACTGATGGTGGTATCTTTATGGGTGCATTGTTCTTCGTACTAATTGTGATTATGTTCAATGGATTCTCCGAGCTATCCATGTCCATCATGAAACTCCCCGTTTTCTATAAGCAAAGAGACCTTCTCTTTTTTCCTTCTTGGGCATATTCTCTGCCTACATGGATCCTTAAGATTCCTATAACCTTAGTGGAAGTTGGTATTTGGGTTGTGATGACTTACTATGTTATAGGATTTGATCCTAGTATTGAAAGGTTCATCAAGCAGTACTTTTTGCTTGTTTGTATCAATCAAATGGCATCAGGACTTTTTCGATTTATGGGGGCAGTTGGGAGGAACATCATTGTTGCAAACACAGTTGGATCATTTGCTCTACTTGCAGTTATGGTCATGGGTGGATTTATCCTATCTAGAGTTGATGTGAAGAAGTGGTGGCTGTGGGGTTACTGGTTCTCACCCATGATGTATGCACAGAATGCTCTAGCTGTGAATGAATTTCTCGGGAAGAGTTGGTTACATGTTCCACCTAATTCAACAGAACCATTAGGAGTAAAGGTGTTGAAGTCACGTGGGATTTTCCCTGAAGCATACTGGTATTGGATTGGTGTTGGAGCTTCCATTGGATACATGGCACTGTTCAACTTCCTTTTCCCCTTGGCCTTACATTATCTTGACCCATTTGGTAAACCACAAGCTTTAATATCTGAAGAAGCCTTAGCTGAGAGAAATGCAGGCAGAAACGAACACATCGTTGAATTATCGTCTAGACACAATGGCTCTTCTGATAAAGGGAATGAAGATCGTAGAAGTGTGTGCTCAAGAACACTGTCAGCAAGAGTGGGAAGCATTGGTGCAAGCGAGCACAACACGAAGCGAGGGATGGTTCTTCCTTTCACACCCTTTTCTATTACTTTTGATGACATCAGATATGCGGTGGAGATGCCACAGGAAATGAAGAACCAAGGCATTCTTGAAGATCGACTTGAACTGTTGAAGGGTGTTAATGGAGCTTTTAGACCAGGAGTTCTGACAGCTCTAATGGGTGTAAGTGGGGCTGGTAAAACAACTTTAATGGACGTGTTATCTGGAAGGAAATCAGCAGGTTATATTCAAGGGCAAATCACTATATCAGGTTACCCTAAAAAGCAAGAAACGTTTGCCCGCATAGCAGGATACTGTGAGCAGACCGATATACACTCTCCCCATGTTACAGTCTATGAGTCTTTGGTTTATTCTGCATGGCTTCGGTTACCACCTGAGGTTGATTCTGCAACTAAACAGATGTTCATTGAGGAAGTTATGGAGCTGGTAGAGCTGACTTCATTAAGAGAAGCCTTGGTGGGATTGCCAGGAGTGAATGGCCTGTCCACGGAGCAGCGCAAGAGGTTAACAATAGCAGTTGAACTTGTTGCCAATCCATCTATTATATTCATGGATGAACCTACCTCTGGCCTTGATGCCAGAGCTGCTGCTATAGTTATGAGAACAGTGAGGAATACAGTGGACACCGGGCGAACAGTGGTCTGCACAATCCACCAGCCAAGCATTGATATATTTGATGCTTTTGATGAGCTACTTCTGTTGAAGCGTGGAGGTGAGGAAATATATGTCGGGCCTTTAGGCCAGCATTGTTCTCAACTGATCAGTTACTTTGAGGGAATTAATGGGGTGCCAAAAATTAAGAATGGTTATAATCCTGCCACTTGGATGTTGGAGGTTACTTCAGAAGCACAAGAAGCGGTTCTTGGAGTTAACTTCACTGAAATTTACAAGAATTCTGACCTATATGGGAGAAACAAGGCCTTGATAAGGGAACTTAGCACACCTCCAGCAGGTTCCAAAGACTTGTACTTCCCCACAAAGTACTCTCAGACTTTCTTCACTCAATGCATGGCATGCCTTTGGAAACAACACCTATCATACTGGAGAAATCCACCATACAGTGCGGTGAGACTTTTATTCACAACAATCATAGCCTTACTGTTTGGGACCATATTTTGGGATATCGGCTCTAGAAGACAAAGAAGACAAGATATATTTAATGCAATGGGGTCCATGTATGCTGCAGTACTATTTATCGGGATACAAAACGCTACATCTGTGCAACCTGTTGTAGCCATTGAGAGAACAGTCTTCTATAGAGAAAGAGCTGCTGGAATGTACTCAGCTTTACCATACGCATTTGGACAGGTTGCCATTGAGATCCCATACATACTCATACAGACCCTGGTATACGGGGTCATAGTGTATGCTATGATTGGGTTTGATTGGACGCTCAGCAAGTTCTTTTGGTATCTCTTCTTCATGTTCTTTACCTTTTTATACTTCACCTTCTATGGCATGATGGCTGTGGGTCTTACCCCGGATCACAACATTGCTGCAATAGTTTCCTTTGGGTTCTACATGATATGGAACCTCTTCTCAGGATTTGTGATTCCAAGAACAGTAAGTTCATCTGTCCCTTTAACTTTATTTTAA 4125 0.4264 MESDELRAASARIGSSSVWRSSGVDVFSGSSRRDDDEEELKWAAIEKLPTYLRMTRGILTEAEGQPPTEIDINKLCPLQRKNLVERLVKIAEQDNEKFLFKLRDRIDRVGLEIPTIEVRFEHLNVEAEAHVGSRALPTIFNFCINLLEGFLSSLHLIPSRKKPFTVLDGVSGIIKPRRMTLLLGPPSSGKTTLLLALAGRLGKDLKFSGRVSYNGRGMEEFVPQRTSAYISQTDLHIGEMTVRETLAFSARCQGIGTRYEMLAELSRREKAENIKPDPDLDIYMKAAALEGQETNVVTDYIMKILGLEVCADTMVGDDMIRGISGGQKKRVTTGEMLVGPTRALFMDEISTGLDSSTTFQMVNSLRQSIHILNGTAVISLLQPAPETYELFDDIILLSDGQIVYQGPRENVLEFFEYMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYIFITVREFAEAFQSFHIGRKLGDELATPFDMSKGHPAVLTKNKYGVSKKELLKACVSREFLLMKRNSFVYIFKMWQLILTGFITMTLFLRTEMHRDTETDGGIFMGALFFVLIVIMFNGFSELSMSIMKLPVFYKQRDLLFFPSWAYSLPTWILKIPITLVEVGIWVVMTYYVIGFDPSIERFIKQYFLLVCINQMASGLFRFMGAVGRNIIVANTVGSFALLAVMVMGGFILSRVDVKKWWLWGYWFSPMMYAQNALAVNEFLGKSWLHVPPNSTEPLGVKVLKSRGIFPEAYWYWIGVGASIGYMALFNFLFPLALHYLDPFGKPQALISEEALAERNAGRNEHIVELSSRHNGSSDKGNEDRRSVCSRTLSARVGSIGASEHNTKRGMVLPFTPFSITFDDIRYAVEMPQEMKNQGILEDRLELLKGVNGAFRPGVLTALMGVSGAGKTTLMDVLSGRKSAGYIQGQITISGYPKKQETFARIAGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSATKQMFIEEVMELVELTSLREALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYVGPLGQHCSQLISYFEGINGVPKIKNGYNPATWMLEVTSEAQEAVLGVNFTEIYKNSDLYGRNKALIRELSTPPAGSKDLYFPTKYSQTFFTQCMACLWKQHLSYWRNPPYSAVRLLFTTIIALLFGTIFWDIGSRRQRRQDIFNAMGSMYAAVLFIGIQNATSVQPVVAIERTVFYRERAAGMYSALPYAFGQVAIEIPYILIQTLVYGVIVYAMIGFDWTLSKFFWYLFFMFFTFLYFTFYGMMAVGLTPDHNIAAIVSFGFYMIWNLFSGFVIPRTVSSSVPLTLF* 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00439 1374 Gene3D - 153 461 IPR027417 -
Phac9g00439 1374 Pfam ABC-2 type transporter 1177 1364 IPR013525 GO:0016020|GO:0140359
Phac9g00439 1374 Pfam ABC-2 type transporter 503 715 IPR013525 GO:0016020|GO:0140359
Phac9g00439 1374 Gene3D - 866 1099 IPR027417 -
Phac9g00439 1374 MobiDBLite consensus disorder prediction 1 32 - -
Phac9g00439 1374 Pfam ABC transporter 167 349 IPR003439 GO:0005524
Phac9g00439 1374 SMART AAA_5 889 1081 IPR003593 GO:0016887
Phac9g00439 1374 SMART AAA_5 176 408 IPR003593 GO:0016887
Phac9g00439 1374 Pfam ABC-transporter N-terminal 91 142 IPR029481 -
Phac9g00439 1374 Pfam ABC transporter 880 1032 IPR003439 GO:0005524
Phac9g00439 1374 MobiDBLite consensus disorder prediction 14 28 - -
Phac9g00439 1374 CDD ABCG_PDR_domain2 849 1087 IPR034003 -
Phac9g00439 1374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 424 IPR027417 -
Phac9g00439 1374 Pfam ABC-2 type transporter 382 434 IPR043926 GO:0140359
Phac9g00439 1374 FunFam ABC transporter G family member 34 154 458 - -
Phac9g00439 1374 Pfam Plant PDR ABC transporter associated 720 783 IPR013581 -
Phac9g00439 1374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 872 1091 IPR027417 -
Phac9g00439 1374 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 151 424 IPR003439 GO:0005524
Phac9g00439 1374 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 7 1364 - -
Phac9g00439 1374 FunFam ABC transporter G family member 40 866 1096 - -
Phac9g00439 1374 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 852 1104 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00439 Phac-Chr9 2732867 2740883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00439 890 1106 Calmodulin-binding Proteins AT2G36910 25.893 2.50e-06 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00439 9 2732867 2740883 Phac1g00729 1 5893089 5917314 PCT