Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00423 ATGGATAAATTAACAGCGAAGCATGTGAAGGAGATGTTTGCAATGTTATGGGTACGGAAACACGATAGACGCATGCAGATTGATCCATGGTCCCAAGATGGAAGACAGAGCATCCTCAGCGGCGTTCCGCTTCCTTCTCTAGGCGCCGCAGCCGGCAGCACCGGGCCGAACCGCAGGATACGGCCATTCATCGTCTCGCCCTACAACCCTTATTACAGATTTTGGGATGCGTTGCTGGTGATCTTAGTTTTCTACACTGCATTTGTTAGTCCCTTTGAGTTTGGGTTTCTTAATGAACCAACGGATTCCCTTTCTATCACGGACAACGTGGTGAACGGTCTTTTTGCCATTGACATTGTTCTCACCTTCTTTGTTGCCTACCTGGACAAGGAGACATATTTGCTCGAGGACCGCCCATTGCTCATTTGCTACAAATACGTCACAACATGGTTTGCCTTCGATGTCATCTCCACGATCCCTTCTGAATTTGCCGGCACTGTGTTGCCCGATCCTCTTCAGACATATGGCTATTTCAATATGCTACGTCTTTGGCGTCTCCGAAGAGTTAGTGCCATGTTTGCAAGATTAGAAAAGGACAGAAATTATAACTATTTTTGGATACGCTCTTGCAAGCTTGTAACTCTATTTTCAATGCATTTTGCTGCCTGCCTTTTCTATTTTATAGCTCTAAATCGTGATCCAAAATCAACATGGCTAAGCATGGTCTCTGAGAACACTCAAAAGAGTATTTACAGTCGCTACGTAACATCAATCTACTGGTCAATAGTGACTCTTACAACAGTTGGTTATGGTGACCTGCATCCTGTAAATACCAAGGAGATGGTGTTTGACATATTTTATATGATGTTTAACTTGGGACTAACGGCTTATCTAATAGGAAACATGACAAACTTAATTGTTCAAGGGACAAGCAGAACTAGAACATATAGAGACAACCTGCAAGCTGTCACAGATTTTGCCCACCGGAATCAGTTACCTATCCGCTTGCAAGAACAAATGCTTGCTCATTTGTTTATGAAGTACAGAACAGATTTAGAAGGACTGCAACAACAAGAAATTATTGATTCACTTCCAAAGGCTATTCGATCTAGCATCTCAGACTACCTATTCACCTCACTTCTTGAGAAAGTGTACTTGTTTCATGGGGTTTCATCTGACCTACTCTTTCAACTGGTCTCGGAGATGAGGGTTGAGTATTTTCCTCCAAAGGAAGAAGTAATTTTGCGGAATGAAGCGCCCACAGACATTTATATATTTGTTAATGGTGCTGCAGAACTCGTCATTAAAAGGAATGGAATAGAACAGGTCGTTGGTGAGGCTGTAAGTGGAGATATAGTTGGAGAAATTGGAGTTCTATGCTATAGGCCACAGATATTTACAGTTCGAACAAAACGATTGAGCCAAATTCTGCGTATGAGCCGTACTACATTTCTAAATCTAGTTAATTCAAATGTTGGAAATGGGGGAATAGTCATGAACAATTTTATCCAGAATTTAGAAGAATCAAGTTATCCAGAGAAGCATGTTATTTTGGCAGAAACGGTGGCCAAGATTGCTCAGGGTAAAATGGATATGCCCATTACCCCGTGCTTTGCAGCAATCAGAAACGATCGTAGATTGTTAGAGAGTTTGCTAAAGAAGGGTTTAGATCCAAATGAAGGAGATAAGAAAGGAAAGACGGCACTGCATATTGCAGCTTCCAAAGGCAGTGAACAGTGCGTAAGTTTGCTTCTAGAGTATGGTGCTGATCCAAATAGCAAAGATTTTAATGGAATTGTCCCAATACTGGAAGCAAGGAAGGGTGATCATAAATCTGTGATAAAACTTCTAAGAGAAAAGGGTGCAATTTTTACTTCTGCCGATGAAGGCAATCTAGCATGCAGGGCTGTTGAGCAAAATAACAAAGAATTACTCGAGGAAGTTATTGAATGCGGTGTGGCTGTGTCACAACCCAACAAAAATGGAGACACTGCTCTCCAAATTGCAGTAGTTGACTCAAACAATGACATGATTAACTTTCTTTTAGCCCAAGGAGCAGTCATAGATATGCCTGATGCTAATGGGCAGACTCCCAGAGTTTTGACAGAAAAACACGATAGTGAAGAGATTCACGCTGTATTAGATGACACGGGGGAGAGCATAAAACCAGCTGCTATTCCAATAACAAAGGATAGCAGTATTGGAAGGTTTCAAAGAGATCTCAGCATGTCTGCCACTTCCCACCAAAGCCTGCAATCTACTAGAGAGTTTACTTGGCAAGATAGTAAAGGGAGAAGAAGGTCTTCCAGCTCTTTCCATAATTCCCTTTTCGGAATCCTCTCTACTTCCAATCGTGAGAGAAGGGCAAGGGAATCTGAAAACAGTAAAAGTGTTAGAAGAAATGAGAGAGAGTTACCCAGAGTGATAATTAGTTGTCCTGAAAAAGGTGAACTTGCTGGAAAACTTGTTTTGTTGCCCAAGTCCCTTGAAGAGCTGCTAGATATTGGTGCCAGTAAATTTGCTATATCTCCCACCAAAGTTTTGACCACAGAAGGAGCAGAAGTAGACCATATAAATCTTATAAGAGATGGTGATCATCTTGTTATTGCCAGCGATGATTCCTAA 2625 0.4168 MDKLTAKHVKEMFAMLWVRKHDRRMQIDPWSQDGRQSILSGVPLPSLGAAAGSTGPNRRIRPFIVSPYNPYYRFWDALLVILVFYTAFVSPFEFGFLNEPTDSLSITDNVVNGLFAIDIVLTFFVAYLDKETYLLEDRPLLICYKYVTTWFAFDVISTIPSEFAGTVLPDPLQTYGYFNMLRLWRLRRVSAMFARLEKDRNYNYFWIRSCKLVTLFSMHFAACLFYFIALNRDPKSTWLSMVSENTQKSIYSRYVTSIYWSIVTLTTVGYGDLHPVNTKEMVFDIFYMMFNLGLTAYLIGNMTNLIVQGTSRTRTYRDNLQAVTDFAHRNQLPIRLQEQMLAHLFMKYRTDLEGLQQQEIIDSLPKAIRSSISDYLFTSLLEKVYLFHGVSSDLLFQLVSEMRVEYFPPKEEVILRNEAPTDIYIFVNGAAELVIKRNGIEQVVGEAVSGDIVGEIGVLCYRPQIFTVRTKRLSQILRMSRTTFLNLVNSNVGNGGIVMNNFIQNLEESSYPEKHVILAETVAKIAQGKMDMPITPCFAAIRNDRRLLESLLKKGLDPNEGDKKGKTALHIAASKGSEQCVSLLLEYGADPNSKDFNGIVPILEARKGDHKSVIKLLREKGAIFTSADEGNLACRAVEQNNKELLEEVIECGVAVSQPNKNGDTALQIAVVDSNNDMINFLLAQGAVIDMPDANGQTPRVLTEKHDSEEIHAVLDDTGESIKPAAIPITKDSSIGRFQRDLSMSATSHQSLQSTREFTWQDSKGRRRSSSSFHNSLFGILSTSNRERRARESENSKSVRRNERELPRVIISCPEKGELAGKLVLLPKSLEELLDIGASKFAISPTKVLTTEGAEVDHINLIRDGDHLVIASDDS* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00423 874 ProSiteProfiles cAMP/cGMP binding motif profile. 386 505 IPR000595 -
Phac9g00423 874 Gene3D - 534 716 IPR036770 -
Phac9g00423 874 Gene3D - 76 308 - -
Phac9g00423 874 SUPERFAMILY cAMP-binding domain-like 311 492 IPR018490 -
Phac9g00423 874 MobiDBLite consensus disorder prediction 743 758 - -
Phac9g00423 874 Pfam KHA, dimerisation domain of potassium ion channel 806 869 IPR021789 -
Phac9g00423 874 PANTHER POTASSIUM CHANNEL AKT1 36 871 IPR045319 GO:0005249|GO:0006813
Phac9g00423 874 ProSiteProfiles Ankyrin repeat profile. 564 596 IPR002110 GO:0005515
Phac9g00423 874 SUPERFAMILY Ankyrin repeat 537 718 IPR036770 -
Phac9g00423 874 Pfam Ankyrin repeats (3 copies) 534 595 IPR002110 GO:0005515
Phac9g00423 874 Pfam Cyclic nucleotide-binding domain 405 491 IPR000595 -
Phac9g00423 874 Coils Coil 627 647 - -
Phac9g00423 874 ProSiteProfiles KHA domain profile. 807 874 IPR021789 -
Phac9g00423 874 MobiDBLite consensus disorder prediction 743 771 - -
Phac9g00423 874 SUPERFAMILY Voltage-gated potassium channels 67 307 - -
Phac9g00423 874 Pfam Ion transport protein 73 313 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac9g00423 874 FunFam Potassium channel KAT2 375 510 - -
Phac9g00423 874 Gene3D Jelly Rolls 352 518 IPR014710 -
Phac9g00423 874 CDD CAP_ED 386 491 IPR000595 -
Phac9g00423 874 SMART cnmp_10 386 503 IPR000595 -
Phac9g00423 874 ProSiteProfiles Ankyrin repeat region circular profile. 661 692 - -
Phac9g00423 874 PRINTS EAG/ELK/ERG potassium channel family signature 254 271 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac9g00423 874 PRINTS EAG/ELK/ERG potassium channel family signature 119 128 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac9g00423 874 PRINTS EAG/ELK/ERG potassium channel family signature 108 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac9g00423 874 PRINTS EAG/ELK/ERG potassium channel family signature 298 307 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac9g00423 874 PRINTS EAG/ELK/ERG potassium channel family signature 85 92 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac9g00423 874 PRINTS EAG/ELK/ERG potassium channel family signature 280 291 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac9g00423 874 ProSiteProfiles Ankyrin repeat region circular profile. 564 595 - -
Phac9g00423 874 ProSiteProfiles Ankyrin repeat profile. 661 693 IPR002110 GO:0005515
Phac9g00423 874 FunFam Potassium channel KAT3 74 308 - -
Phac9g00423 874 SMART ANK_2a 532 560 IPR002110 GO:0005515
Phac9g00423 874 SMART ANK_2a 597 626 IPR002110 GO:0005515
Phac9g00423 874 SMART ANK_2a 661 690 IPR002110 GO:0005515
Phac9g00423 874 SMART ANK_2a 628 657 IPR002110 GO:0005515
Phac9g00423 874 SMART ANK_2a 564 593 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00423 Phac-Chr9 2683535 2690508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00423 28 872 Ion Channels AT2G25600 53.721 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00423 K21867 - gmx:100802964 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00423 9 2683535 2690508 Phac9g00423 9 2683535 2690508 ECH