Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00422 ATGGATAAATTAACAGCGAAGCATGTGAAGGAGATGTTTGCAATGTTATGGGTACGGAAACACGATAGACGCATGCAGATTGATCCATGGTCCCAAGATGGAAGACAGAGCATCCTCAGCGGCGTTCCGCTTCCTTCTCTAGGCGCCGCAGCCGGCAGCACCGGGCCGAACCGCAGGATACGGCCATTCATCGTCTCGCCCTACAACCCTTATTACAGATTTTGGGATGCGTTGCTGGTGATCTTAGTTTTCTACACTGCATTTGTTAGTCCCTTTGAGTTTGGGTTTCTTAATGAACCAACGGATTCCCTTTCTATCACGGACAACGTGGTGAACGGTCTTTTTGCCATTGACATTGTTCTCACCTTCTTTGTTGCCTACCTGGACAAGGAGACATATTTGCTCGAGGACCGCCCATTGCTCATTTGCTACAAATACGTCACAACATGGTTTGCCTTCGATGTCATCTCCACGATCCCTTCTGAATTTGCCGGCACTGTGTTGCCCGATCCTCTTCAGACATATGGCTATTTCAATATGCTACGTCTTTGGCGTCTCCGAAGAGTTAGTGCCATGTTTGCAAGATTAGAAAAGGACAGAAATTATAACTATTTTTGGATACGCTCTTGCAAGCTTGTATGTGTAACTCTATTTTCAATGCATTTTGCTGCCTGCCTTTTCTATTTTATAGCTCTAAATCGTGATCCAAAATCAACATGGCTAAGCATGGTCTCTGAGAACACTCAAAAGAGTATTTACAGTCGCTACGTAACATCAATCTACTGGTCAATAGTGACTCTTACAACAGTTGGTTATGGTGACCTGCATCCTGTAAATACCAAGGAGATGGTGTTTGACATATTTTATATGATGTTTAACTTGGGACTAACGGCTTATCTAATAGGAAACATGACAAACTTAATTGTTCAAGGGACAAGCAGAACTAGAACATATAGAGACAACCTGCAAGCTGTCACAGATTTTGCCCACCGGAATCAGTTACCTATCCGCTTGCAAGAACAAATGCTTGCTCATTTGTTTATGAAGTACAGAACAGATTTAGAAGGACTGCAACAACAAGAAATTATTGATTCACTTCCAAAGGCTATTCGATCTAGCATCTCAGACTACCTATTCACCTCACTTCTTGAGAAAGTGTACTTGTTTCATGGGGTTTCATCTGACCTACTCTTTCAACTGGTCTCGGAGATGAGGGTTGAGTATTTTCCTCCAAAGGAAGAAGTAATTTTGCGGAATGAAGCGCCCACAGACATTTATATATTTGTTAATGGTGCTGCAGAACTCGTCATTAAAAGGAATGGAATAGAACAGGTCGTTGGTGAGGCTGTAAGTGGAGATATAGTTGGAGAAATTGGAGTTCTATGCTATAGGCCACAGATATTTACAGTTCGAACAAAACGATTGAGCCAAATTCTGCGTATGAGCCGTACTACATTTCTAAATCTAGTTAATTCAAATGTTGGAAATGGGGGAATAGTCATGAACAATTTTATCCAGAATTTAGAAGAATCAAGTTATCCAGAGAAGCATGTTATTTTGGCAGAAACGGTGGCCAAGATTGCTCAGGGTAAAATGGATATGCCCATTACCCCGTGCTTTGCAGCAATCAGAAACGATCGTAGATTGTTAGAGAGTTTGCTAAAGAAGGGTTTAGATCCAAATGAAGGAGATAAGAAAGGAAAGACGGCACTGCATATTGCAGCTTCCAAAGGCAGTGAACAGTGCGTAAGTTTGCTTCTAGAGTATGGTGCTGATCCAAATAGCAAAGATTTTAATGGAATTGTCCCAATACTGGAAGCAAGGAAGGGTGATCATAAATCTGTGATAAAACTTCTAAGAGAAAAGGGTGCAATTTTTACTTCTGCCGATGAAGGCAATCTAGCATGCAGGGCTGTTGAGCAAAATAACAAAGAATTACTCGAGGAAGTTATTGAATGCGGTGTGGCTGTGTCACAACCCAACAAAAATGGAGACACTGCTCTCCAAATTGCAGTAGTTGACTCAAACAATGACATGATTAACTTTCTTTTAGCCCAAGGAGCAGTCATAGATATGCCTGATGCTAATGGGCAGACTCCCAGAGTTTTGACAGAAAAACACGATAGTGAAGAGATTCACGCTGTATTAGATGACACGGGGGAGAGCATAAAACCAGCTGCTATTCCAATAACAAAGGATAGCAGTATTGGAAGGTTTCAAAGAGATCTCAGCATGTCTGCCACTTCCCACCAAAGCCTGCAATCTACTAGAGAGTTTACTTGGCAAGATAGTAAAGGGAGAAGAAGGTCTTCCAGCTCTTTCCATAATTCCCTTTTCGGAATCCTCTCTACTTCCAATCGTGGTAAGTATATCTTAGAACAAATAGATGATATTAAACTGAACAACTTTTTCTCCGATGCCCAGAAAACAGTAAGCAATTTGAATATTATGATAATTTAA 2460 0.413 MDKLTAKHVKEMFAMLWVRKHDRRMQIDPWSQDGRQSILSGVPLPSLGAAAGSTGPNRRIRPFIVSPYNPYYRFWDALLVILVFYTAFVSPFEFGFLNEPTDSLSITDNVVNGLFAIDIVLTFFVAYLDKETYLLEDRPLLICYKYVTTWFAFDVISTIPSEFAGTVLPDPLQTYGYFNMLRLWRLRRVSAMFARLEKDRNYNYFWIRSCKLVCVTLFSMHFAACLFYFIALNRDPKSTWLSMVSENTQKSIYSRYVTSIYWSIVTLTTVGYGDLHPVNTKEMVFDIFYMMFNLGLTAYLIGNMTNLIVQGTSRTRTYRDNLQAVTDFAHRNQLPIRLQEQMLAHLFMKYRTDLEGLQQQEIIDSLPKAIRSSISDYLFTSLLEKVYLFHGVSSDLLFQLVSEMRVEYFPPKEEVILRNEAPTDIYIFVNGAAELVIKRNGIEQVVGEAVSGDIVGEIGVLCYRPQIFTVRTKRLSQILRMSRTTFLNLVNSNVGNGGIVMNNFIQNLEESSYPEKHVILAETVAKIAQGKMDMPITPCFAAIRNDRRLLESLLKKGLDPNEGDKKGKTALHIAASKGSEQCVSLLLEYGADPNSKDFNGIVPILEARKGDHKSVIKLLREKGAIFTSADEGNLACRAVEQNNKELLEEVIECGVAVSQPNKNGDTALQIAVVDSNNDMINFLLAQGAVIDMPDANGQTPRVLTEKHDSEEIHAVLDDTGESIKPAAIPITKDSSIGRFQRDLSMSATSHQSLQSTREFTWQDSKGRRRSSSSFHNSLFGILSTSNRGKYILEQIDDIKLNNFFSDAQKTVSNLNIMII* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00422 819 SUPERFAMILY Voltage-gated potassium channels 67 309 - -
Phac9g00422 819 Gene3D Jelly Rolls 354 520 IPR014710 -
Phac9g00422 819 Coils Coil 629 649 - -
Phac9g00422 819 Pfam Ankyrin repeats (3 copies) 536 597 IPR002110 GO:0005515
Phac9g00422 819 Pfam Ion transport protein 73 315 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac9g00422 819 ProSiteProfiles Ankyrin repeat region circular profile. 566 597 - -
Phac9g00422 819 SMART cnmp_10 388 505 IPR000595 -
Phac9g00422 819 ProSiteProfiles Ankyrin repeat profile. 663 695 IPR002110 GO:0005515
Phac9g00422 819 FunFam Potassium channel KAT2 377 512 - -
Phac9g00422 819 FunFam Potassium channel KAT3 74 310 - -
Phac9g00422 819 Gene3D - 76 310 - -
Phac9g00422 819 SMART ANK_2a 566 595 IPR002110 GO:0005515
Phac9g00422 819 SMART ANK_2a 599 628 IPR002110 GO:0005515
Phac9g00422 819 SMART ANK_2a 663 692 IPR002110 GO:0005515
Phac9g00422 819 SMART ANK_2a 534 562 IPR002110 GO:0005515
Phac9g00422 819 SMART ANK_2a 630 659 IPR002110 GO:0005515
Phac9g00422 819 MobiDBLite consensus disorder prediction 747 773 - -
Phac9g00422 819 CDD CAP_ED 388 493 IPR000595 -
Phac9g00422 819 ProSiteProfiles Ankyrin repeat profile. 566 598 IPR002110 GO:0005515
Phac9g00422 819 PANTHER POTASSIUM CHANNEL AKT1 36 740 IPR045319 GO:0005249|GO:0006813
Phac9g00422 819 Pfam Cyclic nucleotide-binding domain 407 493 IPR000595 -
Phac9g00422 819 SUPERFAMILY Ankyrin repeat 539 720 IPR036770 -
Phac9g00422 819 ProSiteProfiles Ankyrin repeat region circular profile. 663 694 - -
Phac9g00422 819 SUPERFAMILY cAMP-binding domain-like 313 494 IPR018490 -
Phac9g00422 819 Gene3D - 536 718 IPR036770 -
Phac9g00422 819 PRINTS EAG/ELK/ERG potassium channel family signature 119 128 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac9g00422 819 PRINTS EAG/ELK/ERG potassium channel family signature 300 309 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac9g00422 819 PRINTS EAG/ELK/ERG potassium channel family signature 85 92 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac9g00422 819 PRINTS EAG/ELK/ERG potassium channel family signature 108 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac9g00422 819 PRINTS EAG/ELK/ERG potassium channel family signature 282 293 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac9g00422 819 PRINTS EAG/ELK/ERG potassium channel family signature 256 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac9g00422 819 ProSiteProfiles cAMP/cGMP binding motif profile. 388 507 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00422 Phac-Chr9 2683535 2690508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00422 44 788 Ion Channels AT4G32500 55.541 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00422 K21867 - gmx:100802964 1063.52