Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00402 ATGAACCTCTTTTCCTTTCTAATATTTTCAACCCTTTTGCTCAAACAAGTGAGCCTAGTTATGGGAGACCTTGGTACTGCTGCATCTTATGGACCACCATACATTCCTACTGCTTGCGGTGGAAATAGCGCAGGGCAATTTCCTCCTGGAAATCTATTTGTGGCTGTGAATGAAGGGTTATGGGATAATGGAGCAGCGTGTGGAAGGAGATACAGAATAAGGTGCATGAGTGGAAACAATAGACCATGCAAAGGTGGCAGCATCGATGTGAAAGTGGTAGATTCTTGTCCAGGCTCACCTTGTTCCAACAGTCTCCTCATGTCAAAAGATGCCTTTGCAGCTATTTCGCACTTCCCTCATGCAAAAATCAATATTGAATATACTCAGATATGA 393 0.4326 MNLFSFLIFSTLLLKQVSLVMGDLGTAASYGPPYIPTACGGNSAGQFPPGNLFVAVNEGLWDNGAACGRRYRIRCMSGNNRPCKGGSIDVKVVDSCPGSPCSNSLLMSKDAFAAISHFPHAKINIEYTQI* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00402 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 4 129 - -
Phac9g00402 130 CDD DPBB_EG45-like 23 128 - -
Phac9g00402 130 SUPERFAMILY Barwin-like endoglucanases 14 130 IPR036908 -
Phac9g00402 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 36 130 IPR007112 -
Phac9g00402 130 Gene3D - 23 130 IPR036908 -
Phac9g00402 130 Pfam Lytic transglycolase 55 127 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00402 Phac-Chr9 2572814 2573969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00402 30 104 Expansin Gene Family AT2G45110 36.585 4.05e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00402 - - ccaj:109795996 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00402 9 2572814 2573969 Phac9g00402 9 2572814 2573969 ECH