Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00397 ATGCTCTTCTTTCTCTCCCTATTACACCTTCTACATCTAACCCTATTAATTCCCTTCACCTTCCCCCTTCTTCCCACTCTCTCTCTCTCTTTCTCTAACATATTTGACAAAGATATGGTACAAGCAAAGAAGTTCAGAGGAGTCAGGCAACGCCAGTGGGGCTCCTGGGTGTCAGAAATTCGCCACCCTTTGCTGAAGAGAAGGGTGTGGCTAGGGACATTTGAGACGGCTGAGGCTGCTGCAAGGGCTTATGACCAAGCAGCCATTTTGATGAATGGCCAGAATGCCAAGACTAACTTCCCCACTTCAAAGAACCAGGCTGAAGTTGATGCCAGTGCCACCACTGCTGCTTCTCGTCATGACAACACTTTCTTATCTCCCAAAGCTCTTTCGGAACTCCTCAGCACAAAGCTCAGAAAGTACTGCAAAGACCCTGCTCCTTCCCTCACTTGTCTCAGGCTAGATGCTGATAATTCCCACATTGGAGTGTGGCAGAAAGGTGCAGGACCACATTCTGGCTCCAACTGGGTCATGAGGGTGGAGCTTGGGAAGAAGCACCCCGAGGGTGAATCAGCATGGTCACCAAACAGTAGTACTAACGACACTGCTGGAAACAGTGTAGTAGTAGAAGAAGAAGAAGAAGAAGAAGAAGATAGACTCGCTTTGCAGATGATCGAGGAGCTACTCAATTGGAACTAG 699 0.4835 MLFFLSLLHLLHLTLLIPFTFPLLPTLSLSFSNIFDKDMVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSKNQAEVDASATTAASRHDNTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKHPEGESAWSPNSSTNDTAGNSVVVEEEEEEEEDRLALQMIEELLNWN* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00397 232 SUPERFAMILY DNA-binding domain 44 103 IPR016177 GO:0003677
Phac9g00397 232 Gene3D AP2/ERF domain 43 103 IPR036955 GO:0003700|GO:0006355
Phac9g00397 232 CDD AP2 43 103 IPR001471 GO:0003700|GO:0006355
Phac9g00397 232 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
Phac9g00397 232 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 41 195 - -
Phac9g00397 232 MobiDBLite consensus disorder prediction 186 217 - -
Phac9g00397 232 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Phac9g00397 232 PRINTS Ethylene responsive element binding protein signature 67 83 IPR001471 GO:0003700|GO:0006355
Phac9g00397 232 FunFam Ethylene-responsive transcription factor 2 43 102 - -
Phac9g00397 232 Pfam AP2 domain 44 93 IPR001471 GO:0003700|GO:0006355
Phac9g00397 232 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Phac9g00397 232 MobiDBLite consensus disorder prediction 191 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00397 Phac-Chr9 2502648 2504619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00397 39 231 AP2-EREBP Transcription Factor Family AT5G25390 60.714 2.27e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac9g00397 AP2 2.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00397 - - gmx:100806821 295.819