Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00395 ATGCCTGAGCTGCTACACGGGATTCTTAAGGTAACCATATTTGAAGTTGATAGACTGCATACTGGATGTCATTTGGATTTCTGTCAGAAGGGCACAACACACAAGGGTAAGAGATTTCTAGCCCAGGTCAAGGGTTGTTTGCTGTGCCGGCGTGAGATTGTTGGGACAAGATTGTATGCAACAGTTGATTTAGACAAGGCAAGGGTTGGACGAACGAGGATGATAGGAAACCAACCGTCTCACCCAAAGTGGAACGAGAGCTTTGAAATCTACTGTGCCCATCGTATCTCAAACGTCATATTCACTGTCAAAGATGGTAACCCAATTGGAGCGACTCTAATTGGAAGAGCCTATGTCCCTGTGGAGCAAGTTCGCAAGGGCCCCATAATTAAGAGGTGGGTTGAGATATTAGACGAAGAAGATCATCGTCCCGTGCCGGGTCACTCCAAAATCCGTGTCACCATGCAATTCAACAGTGTCACACAGGACACAACATGCTTATGGTCTCAGGGAATTCGCATGCCATTTTATGGAGTTCCTCGTACATTTTTCAATCAGAGAGAAGGTTGTCATGTTACTTTGTACCAAGATGCTCATGCCCCACGTGGCGTTGGCGTTGTCCATTTCATTCCAATATCCCAAGGAAAAGATTACTTGCCCGCAAGATGTTGGGAGGACATTTACACTGCCATTAAGGAGGCTAAGCATTTTGTTTACATAGCTGGTTGGTCTGTTTACACTGAAATAGCATTGGTTAGGGACAAAGACGAATCAAATATCACCCTCGGGGAGTTACTTAAGAAGAAGGCTGATGAAGGTGTCAAGGTTCTTTTGCTTATTTGGAATGACAGAACTTCTGTAGCAGATTTCAAGAAAGAGGGCTTGATGGCAACTCATGATCAGGAAACTGCTGCTTACTTTAGAAACACGAAGGTGCATTGTGTTTTGTGTCCACGGAACCCGGATGATGGGACAAGCATGATTCAAGGCTTTCAAGCATCAACTATGTTCACTCATCACCAAAAGAGTGTGGTTGTTGATGCCCGTTTTGTAGGGTCATCACTGAAGCGAAGTGTCGTAAGTTTCATAGGTGGCCTTGATCTTTGTGACGGGAGGTATGATACTAGGGAGCATCCTCTATTTTCAACTTTGAATACAGTGCATATAAATGATTTCCATCAACCAAACTTCCCAAGTGCTTCTATTGATAAAGGTGGTCCTAGAGAGCCATGGCATGACATTCATTGCAAGCTAGAAGGTCCCATTGCTTGGGATGTTTTGTACAATTTTGAGCAAAGGTGGGAGAAGCAAGTAGGGAAGGAACTGCTATTCTCGCTTGATGATCTTGATCACATTCTAGTCCACCCATCTGATGCACAAAGATCAGAAGTCGGAGAAGAAGACACATGGAATGTTCAGTTGTTTAGATCCATTGATGGTGGTGCTGCTGCTTTTGGCTTTCCCCAAGCCCCGGATGTAGTTGCTGAATTAGGCCTTGTTAGTGGGAAAGACAATATCATTGAGAGAAGTATTCAGGATGCCTACATTAATGCTATTAGGCGTGCAAAAAACTTCATCTACATTGAGAACCAATACTTCCTAGGGAGTTCATATGCTTGGCACGCAACTAATGACATTGTGGTTGAGAACATTGCTGCTTTGCATCTTATACCAAAGGAGTTGACATTGAAGATTGTAAGCAAGATTGAAGCAAAAGAGAGGTTTTCTGTGTACATAGTGATCCCAATGTGGCCTGAAGGTGTACCTGAAAGTGATTCGGTTCAAGCAATATTAGATTGGCAGAGAAGAACCATTGAGATGATGTATTCCGACATTGCTGATGCCTTAGCAAAATTGGGCATTCAAGCACACCCTCGAGATTATTTAACATTTTTTTGCCTTGGCAAGAGGGAGCATAAGGAACCTGGAGAGTATACTCCTCCACAGGAACCAGAGCCTGGGAGTAATTACAGAAGAGCACACGATTCTAGGAGGTTCATGATCTATGTTCATTCCAAAATGATGATAGTTGATGATGAATACATAATCGTTGGCTCTGCTAACATAAATCAGAGATCAATGGAGGGTTCAAGAGACAGTGAGATTGCAATGGGTGCATTCCAACCACGTCATCTAGCATGGAATGGGCGAGCCAGAGGGGAGATATATAGATTTCGACGTGCACTGTGGTATGAGCACCTTGGGGACCATGGTTTTGAGACAAAAATCTTGGACAATCCAGAACATTTGGAGTGCATAGGTCTTGTGAATAGGCTTGCAGAGGAGAATTGGGAGATGTACTCAAAGGAAACATTTGATGAATTTAGACCATTTCACCACCTCATGCGCTACCCTATACATGTAGCCCACGATGGAACCATAACAAATCTTCCTGGGTTTCAACATTTTCCTGACACCCACGCTCGGATTTTGGGTTCCTGTTCAAATTTCCTTCCTGCAATTCTCACCACCTAG 2475 0.4372 MPELLHGILKVTIFEVDRLHTGCHLDFCQKGTTHKGKRFLAQVKGCLLCRREIVGTRLYATVDLDKARVGRTRMIGNQPSHPKWNESFEIYCAHRISNVIFTVKDGNPIGATLIGRAYVPVEQVRKGPIIKRWVEILDEEDHRPVPGHSKIRVTMQFNSVTQDTTCLWSQGIRMPFYGVPRTFFNQREGCHVTLYQDAHAPRGVGVVHFIPISQGKDYLPARCWEDIYTAIKEAKHFVYIAGWSVYTEIALVRDKDESNITLGELLKKKADEGVKVLLLIWNDRTSVADFKKEGLMATHDQETAAYFRNTKVHCVLCPRNPDDGTSMIQGFQASTMFTHHQKSVVVDARFVGSSLKRSVVSFIGGLDLCDGRYDTREHPLFSTLNTVHINDFHQPNFPSASIDKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKELLFSLDDLDHILVHPSDAQRSEVGEEDTWNVQLFRSIDGGAAAFGFPQAPDVVAELGLVSGKDNIIERSIQDAYINAIRRAKNFIYIENQYFLGSSYAWHATNDIVVENIAALHLIPKELTLKIVSKIEAKERFSVYIVIPMWPEGVPESDSVQAILDWQRRTIEMMYSDIADALAKLGIQAHPRDYLTFFCLGKREHKEPGEYTPPQEPEPGSNYRRAHDSRRFMIYVHSKMMIVDDEYIIVGSANINQRSMEGSRDSEIAMGAFQPRHLAWNGRARGEIYRFRRALWYEHLGDHGFETKILDNPEHLECIGLVNRLAEENWEMYSKETFDEFRPFHHLMRYPIHVAHDGTITNLPGFQHFPDTHARILGSCSNFLPAILTT* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00395 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 666 693 IPR001736 GO:0003824
Phac9g00395 824 Gene3D Endonuclease Chain A 486 709 - -
Phac9g00395 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 335 372 IPR001736 GO:0003824
Phac9g00395 824 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 158 IPR035892 -
Phac9g00395 824 CDD C2_plant_PLD 4 157 - -
Phac9g00395 824 PIRSF PLD_plant 1 824 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Phac9g00395 824 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Phac9g00395 824 PANTHER PHOSPHOLIPASE D 4 812 IPR015679 -
Phac9g00395 824 SUPERFAMILY Phospholipase D/nuclease 178 447 - -
Phac9g00395 824 SMART pld_4 666 693 IPR001736 GO:0003824
Phac9g00395 824 SMART pld_4 335 372 IPR001736 GO:0003824
Phac9g00395 824 Gene3D C2 domain 6 169 IPR035892 -
Phac9g00395 824 SMART C2_3c 8 133 IPR000008 -
Phac9g00395 824 Pfam C2 domain 9 135 IPR000008 -
Phac9g00395 824 Gene3D Endonuclease Chain A 213 452 - -
Phac9g00395 824 SUPERFAMILY Phospholipase D/nuclease 511 735 - -
Phac9g00395 824 Pfam Phospholipase D C terminal 743 813 IPR024632 -
Phac9g00395 824 FunFam Phospholipase D delta 214 451 - -
Phac9g00395 824 Pfam Phospholipase D Active site motif 667 693 IPR001736 GO:0003824
Phac9g00395 824 Pfam Phospholipase D Active site motif 335 372 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00395 Phac-Chr9 2482068 2485672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00395 4 824 Phospholipase D Gene Family (Wang group) AT3G15730 62.185 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00395 K01115 - gmx:100794115 1403.65