Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00325 ATGGATGAAGATAGAGGTGATGTATTGGATCCGGTTCATGATGGGAATTTAAGTCATTTGGTTGAAGGGGTTGCAATTGCTAGCGATAGTATAAGTGGAGAAGCTGGAACTTCGAGACATGCCGATGAGAACTCGGGATCTGATAAGGAGCTAAAGGAGGAAGTTAAGGGGCAAGACAAGCATGTTCGCGAAAATTCCAGTGAAAAGTTACCTGGGGTTGATCAGGGAACTAGTTATAATTCAAACCATTTGGTTAATCAAGAAGTGATTGAAACTGTGGTGGTGGTTGAGTCTGTTCAGACTGAGTACATCAATGAAGATAATAGGAAATTGGAAGTGAAAGTTGAGGAATCAGAGTTGAGTTTGGTGTCCATGAAAGCAGCAAAAGAGGTGTCTGAAACTGATAAAAGTTCATGCGTGATTGATATAAAGTGCAGCAGCCACAAAAAGTTGTATGAGAATTCTGAAGGTGAAACGATTTGTAGGATTTGCCATCTGACTTCTGGTCAGTCATCAGATGTAACAATTTTTGGCACTGCTAACAGTGCCACAAGTGTAGATTTGATTCAGCTTGGTTGTGCTTGTAAAGATGAGCTAGGCATTGCGCACGTTCACTGTGCTGAGGCGTGGTTCAAGCTCAAGGGGAACAGGTTATGTGAAATATGCGGTGAGCCTGCAAAAAATGTTTCAGGTGTTAATAGTAATGGATTTATAGAAGAGTGGAATGAAAGAAGATTCATGGACAACGATGGTAATTCATCCCCAAGGGTTGTTGGATGCTGGCGGGGACAGCCATTTTGTAACTTCTTGATGGCATGCTTGGTGATAGCGTTTGTTCTGCCCTGGTTTTTTCGTGTAAATATGTTCTAG 870 0.4184 MDEDRGDVLDPVHDGNLSHLVEGVAIASDSISGEAGTSRHADENSGSDKELKEEVKGQDKHVRENSSEKLPGVDQGTSYNSNHLVNQEVIETVVVVESVQTEYINEDNRKLEVKVEESELSLVSMKAAKEVSETDKSSCVIDIKCSSHKKLYENSEGETICRICHLTSGQSSDVTIFGTANSATSVDLIQLGCACKDELGIAHVHCAEAWFKLKGNRLCEICGEPAKNVSGVNSNGFIEEWNERRFMDNDGNSSPRVVGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00325 289 PANTHER ZINC FINGER, RING-CH-TYPE 36 289 - -
Phac9g00325 289 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 234 IPR013083 -
Phac9g00325 289 SMART ringv_2 160 223 IPR011016 GO:0008270
Phac9g00325 289 SUPERFAMILY RING/U-box 155 225 - -
Phac9g00325 289 Pfam RING-variant domain 161 222 IPR011016 GO:0008270
Phac9g00325 289 MobiDBLite consensus disorder prediction 41 68 - -
Phac9g00325 289 ProSiteProfiles Zinc finger RING-CH-type profile. 153 229 IPR011016 GO:0008270
Phac9g00325 289 MobiDBLite consensus disorder prediction 28 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00325 Phac-Chr9 2116998 2122702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00325 141 288 C3H Transcription Factor Family AT5G05830 41.176 1.70e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00325 - - gmx:100776373 448.743