Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00323 ATGAAGAAGACCCGTCAGGAGATGTCTAACTCTGTCATCAATGGCAATGATTCTCTCACTGGTCACATCATATCTACAACTATTGGAGGCAAAAATGGGGAACCTAAACAGACTATTAGTTACATGGCAGAACGAGTTGTAGGAACTGGGTCATTTGGAATTGTTTTCCAGGCAAAATGCTTGGAAACTGGGGAAGCAGTGGCAATTAAAAAGGTTTTACAAGACAGGCGATACAAGAATCGTGAACTACAGTTAATGCGTGTGATGGATCACCCAAATGTGATCACTCTGAAGCATTGCTTCTTTTCCACTACAAGTACCGATGAACTTTTTCTTAATTTGGTGATGGAATATGTTCCAGAGTCCATGTATAGAGTTTTGAAACACTATAGCAATGCTAATCAAAGAATGCCCATCATCTATGTGAAACTTTACATGTACCAGATTTTCAGGGGGTTGGCTTATATCCACACTGTTCCCAAAGTTTGCCACAGAGATTTGAAGCCTCAAAATATACTGGTGGATCCTCTTACTCACCAAGTGAAGCTATGTGATTTTGGAAGTGCAAAAGTTCTGGTCCAAGGTGAAGCTAATATATCATACATATGTTCACGATTCTATCGAGCACCAGAACTTATATTTGGTGCCACTGAGTATACAAGTTCAATCGATATCTGGTCAGCTGGCTGTGTCCTTGCCGAACTTCTTTTAGGCCAGCCATTATTCCCTGGCGAAAATGCTGTAGACCAGCTCGTACATATTATAAAGGTGCTTGGCACACCTACTCGAGAGGAAGTACGCTGTATGAATCCCAATTACAATGACTTTAGGTTTCCGCAGATAAAAGCACACCCATGGCACAAGATATTCCACAAAAAGATGCCTCCAGAAGCTATTGATCTTGCATCCCGGCTTTTGCAATACTCTCCAAGTCTTAGGTGCACTGCGCTTGAAGCATGTGCTCATCCTTTCTTTGATGAACTCCGAGAACCCAATGCTCGTCTGCCAAATGGTCGTCCATTGCCCCCTCTATTTAACTTCAAACAGGAATTAACCGGGGCATCTCCTGAGCTTGTTAATAAGCTGATACCTGACCATGTGAAGCGGCAAATAGGGCTGCAATTTATTCATCTTGGAGGATCGTGA 1146 0.4241 MKKTRQEMSNSVINGNDSLTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVMDHPNVITLKHCFFSTTSTDELFLNLVMEYVPESMYRVLKHYSNANQRMPIIYVKLYMYQIFRGLAYIHTVPKVCHRDLKPQNILVDPLTHQVKLCDFGSAKVLVQGEANISYICSRFYRAPELIFGATEYTSSIDIWSAGCVLAELLLGQPLFPGENAVDQLVHIIKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELTGASPELVNKLIPDHVKRQIGLQFIHLGGS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00323 381 FunFam Shaggy-related protein kinase kappa 121 368 - -
Phac9g00323 381 Pfam Protein kinase domain 41 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00323 381 Gene3D Phosphorylase Kinase; domain 1 26 120 - -
Phac9g00323 381 ProSiteProfiles Protein kinase domain profile. 41 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00323 381 Gene3D Transferase(Phosphotransferase) domain 1 121 368 - -
Phac9g00323 381 SMART serkin_6 41 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00323 381 CDD STKc_GSK3 36 328 IPR039192 -
Phac9g00323 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Phac9g00323 381 FunFam Glycogen synthase kinase-3 beta 25 120 - -
Phac9g00323 381 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Phac9g00323 381 SUPERFAMILY Protein kinase-like (PK-like) 40 349 IPR011009 -
Phac9g00323 381 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 5 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00323 Phac-Chr9 2098265 2103232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00323 45 363 MAP Kinase Gene Family AT3G59790 35.329 3.55e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Phac9g00323 Pkinase 3.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00323 K14502 - gmx:100779909 758.059