Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00316 ATGAAAATGAACCTTCTTTTTGTGTTTATTCTTCTTCTGCACTACGTTGCTGCTGCAGACCCTCCTGCTTCCTCTCCTCAACCTCCTCCTGTTTTCTCTCCAGCGGGGAAAGAGCAGCATCACCTGAACAAGAAAGTGCTAATAGCTATTGTCGTAGCCACCACTTCACTTGCTGCACTCATTTTCAGTTTCCTATGTTTCTGGATTTATCACACTAAGTCTCCAACAAAATCCAAAACCAAAAAGGTTCAAACTCCCGGTCCAGATGCAGAGAAGGGGATCACCCTAGCACCGTTTCTGAGTAGATTCAGTTCCATCAAAATTGTTGGTATGAAGGAGTCTGTGCCGATAGTTGATTATAAGCAAATAGAAAAAACGACCAATAATTTTGAGGAAAGTAACATCTTGGGCGAGGGTGGTTTTGGATGTGTTTACAAGGCTCGCTTGGATCATAACCTGGATGTTGCAGTAAAAAAACTCCACTGTGAGACTCAACATGCGGAGAGAGAATTCGAGAACGAGGTTAATTTGTTGAGTAAAATTCAGCATCCGAATATAATCTCCTTACTGGGCTGTAGCATTGATGGTGACACGAGGTTTATTGTTTATGAGTTGATGCAAAATGGATCATTGGAAGCTCATTTACATGGACCTACTCATGGCTCGGCATTGACTTGGCACATGAGGATGAAGATTGCCCTTGACACAGCAAAAGGACTAGAATATCTGCATGAACACTGCTACCCTGCAGTGATCCACAGAGACATGAAATCTTCTAATATTCTCTTAGATGCAAACTTCAATGCCAAGCTGTCTGATTTTGGTCTAGCCATAACTGATGGGTCCCAAAGCAAGAAGAACATTAAACTATCGGGTACCTTGGGATACGTAGCACCGGAGTATCTTCTAGATGGTAAATTAAGTGATAAAAGTGATGTGTATGCTTTTGGGGTTGTGCTATTGGAGCTCCTATTAGGAAGGAAGCCAGTGGAAAAACTGGCACCGACGCAATGCCAGTCTATTGTCACATGGGCCATGCCACAGCTCACGGACAGAGCCAAGCTTCCAAACATTGTGGATCCAGTGATTAAGAACACAATGGATCCCAAACACTTGTACCAGGTTGCTGCTGTGGCTGTGCTATGCGTGCAACCAGAACCTAGTTATCGCCCCCTTATCACAGATGTTCTTCACTCACTTATCCCTCTTGTTCCCATGGAGCTTGGAGGAACACTAAGAGTTTCACAAGTGAGGCAGCATAGTACTTCATAG 1272 0.4379 MKMNLLFVFILLLHYVAAADPPASSPQPPPVFSPAGKEQHHLNKKVLIAIVVATTSLAALIFSFLCFWIYHTKSPTKSKTKKVQTPGPDAEKGITLAPFLSRFSSIKIVGMKESVPIVDYKQIEKTTNNFEESNILGEGGFGCVYKARLDHNLDVAVKKLHCETQHAEREFENEVNLLSKIQHPNIISLLGCSIDGDTRFIVYELMQNGSLEAHLHGPTHGSALTWHMRMKIALDTAKGLEYLHEHCYPAVIHRDMKSSNILLDANFNAKLSDFGLAITDGSQSKKNIKLSGTLGYVAPEYLLDGKLSDKSDVYAFGVVLLELLLGRKPVEKLAPTQCQSIVTWAMPQLTDRAKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPMELGGTLRVSQVRQHSTS* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00316 423 Gene3D Transferase(Phosphotransferase) domain 1 206 406 - -
Phac9g00316 423 FunFam Protein kinase superfamily protein 97 205 - -
Phac9g00316 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Phac9g00316 423 ProSiteProfiles Protein kinase domain profile. 130 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00316 423 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
Phac9g00316 423 FunFam probable receptor-like protein kinase At1g80640 206 405 - -
Phac9g00316 423 SUPERFAMILY Protein kinase-like (PK-like) 108 400 IPR011009 -
Phac9g00316 423 PANTHER OS01G0750732 PROTEIN 37 406 - -
Phac9g00316 423 SMART serkin_6 130 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00316 423 Pfam Protein kinase domain 130 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00316 423 CDD STKc_IRAK 136 403 - -
Phac9g00316 423 Gene3D Phosphorylase Kinase; domain 1 97 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00316 Phac-Chr9 2043291 2047327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00316 44 404 Receptor kinase-like Gene Family AT3G58690 44.324 2.62e-97 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Phac9g00316 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00316 - - gmx:100784795 702.205