Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00315 ATGGCCAGATCACAACAGCGATACCGAGGTGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCCGAAATTCGACACCCCATATTGAAAACTAGGATATGGCTAGGAACTTTTGAAACTGCTGAGGATGCAGCTAGAGCCTATGATGAAGCGGCAAGGCTAATGTGTGGCACAAGAGCAAGAACAAACTTCCCTTACAACCCAAATGCATCTCAGTCATCGTCTTCGAAGCTTCTCTCAGCAACTTTAACTGCAAAGCTGCATAGGTGCTACATGGCTTCTTTGCAAATGACAAGGCCATCACTACCAGAGCCTCAGAGAGTGGCTTCACCAAATGTCATCACCTCTACAAGTAACTTCTCCATAAAGAGTAACGAAACTAAAACAATGCTGCCACAAAAGAGACAAAAGGAGGAGCAAGAAGTAGAGGAGAATTGGGTTTTGAAGAAGGTTAAGGTGGAAAGGACTCAACAGTTCAAGCCTCTTGAAGAGGACCACATTGAGCAAATGATAGAGGAGTTGCTGCATTATGGCACTATTGAGCTGTGCTCTGTGATTCCCCACCACAGGCTCTTTTAA 576 0.4566 MARSQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRARTNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQMTRPSLPEPQRVASPNVITSTSNFSIKSNETKTMLPQKRQKEEQEVEENWVLKKVKVERTQQFKPLEEDHIEQMIEELLHYGTIELCSVIPHHRLF* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00315 191 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Phac9g00315 191 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Phac9g00315 191 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Phac9g00315 191 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Phac9g00315 191 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Phac9g00315 191 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Phac9g00315 191 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 137 - -
Phac9g00315 191 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Phac9g00315 191 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Phac9g00315 191 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00315 Phac-Chr9 2028288 2029590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00315 1 190 AP2-EREBP Transcription Factor Family AT5G25190 65.263 4.64e-79 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac9g00315 AP2 6.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00315 - - gmx:100804510 307.76