Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g00312 | ATGGAAACACTGAGCTACGAGGCTCCCTTCTATGATAGCCTTTCTGCTGTAGAGACTCCTCCAAGTCCAAGCACACCATTGCAGAATCCACAGGAGAAGAAACAGCTATCTGTTGAGGAAGAAGAAGAAGAAGAAAAAGAGGCAAAAACAGGTACTTTACTGGATCTAAATATCCCTGGTGATGATTCGGCTACTGAGTGCAGTCCAGTGCTGAATCTCATCACTTGTCTGAACACGGATTTGTCATCAGAAAACCCCCATGAGCCAAGGGTGTTCTCTTGCAACTACTGTCATAGGAAGTTCTACAGTTCACAAGCTTTAGGGGGACACCAAAATGCTCACAAAAGAGAGAGGTCAGTAGCAAAGAGAGGTCACAGATCAGCATCACCCATGATGGCCCCAGCAACAGCTTTTGGAATTCCCTTTCTCCACAATCACCTTCCTCACTATGCCACTGTGGCTTCTCTGCCTCTCCATGGTGCTTGTATTAATAAACCACTTGGAATTCAGGCTCACTGTATGATTCACAAGCCTCCTCCTCCTCCTTCTTCTCATCTTTCATTCAATGGGTTTTCAAACACTTTTGGACATCATCATGGGTGGTCAAGGTCAAGACCCCTTATTACTCAACAACCTGGAATAGGAAAGTTAACTGTGGAAAGTTGTCACAAAACATCAAGAGGCAGTTTTGGGAGATTAGAAGCGGGGAGCACCATGCTCAATTCAGCAGTTAATGAAGAAATAAGTGAATATCTGGTTAGTGAAAATGTTAGTTTGAAGAGTAGTCAAGAACAAAAGAAACACCTTGACTTGTCCCTGAAGCTCTAA | 828 | 0.4384 | METLSYEAPFYDSLSAVETPPSPSTPLQNPQEKKQLSVEEEEEEEKEAKTGTLLDLNIPGDDSATECSPVLNLITCLNTDLSSENPHEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSVAKRGHRSASPMMAPATAFGIPFLHNHLPHYATVASLPLHGACINKPLGIQAHCMIHKPPPPPSSHLSFNGFSNTFGHHHGWSRSRPLITQQPGIGKLTVESCHKTSRGSFGRLEAGSTMLNSAVNEEISEYLVSENVSLKSSQEQKKHLDLSLKL* | 276 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g00312 | 275 | Gene3D | Classic Zinc Finger | 76 | 135 | - | - | |
Phac9g00312 | 275 | MobiDBLite | consensus disorder prediction | 17 | 33 | - | - | |
Phac9g00312 | 275 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 92 | 119 | IPR013087 | - | |
Phac9g00312 | 275 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 94 | 114 | IPR013087 | - | |
Phac9g00312 | 275 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Phac9g00312 | 275 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 15 | 275 | IPR044246 | GO:0009788 | |
Phac9g00312 | 275 | SUPERFAMILY | beta-beta-alpha zinc fingers | 89 | 119 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g00312 | Phac-Chr9 | 1983786 | 1985188 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac9g00312 | 15 | 275 | C2H2 Transcription Factor Family | AT5G10970 | 37.276 | 3.32e-44 | 149 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phac9g00312 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g00312 | - | - | vra:106761491 | 384.8 |