Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00289 ATGGCAAAGTGTCACCGGAATAACGTCGGATCCATCGCTCTCGACCACCGACACACGGCCAAAAATGCCACCGCTGGCAGCCACTTCCGCGTGCTCCGCCGCTTGATCTTCGACGCCGTCAGCTGCGGCGGCACCTCTCGCTACCGGTATCGCCAGCGTGGCAGCGACGATGGAGACGTTGGCGACTTTAGCTCGGAGGCTAGCCATGCAGAGAAGGAGGAGAGGTCGGAGAAGCTGTCGGATCTGCTGAACGCGGCGGAGATGAAAACGGAGGCGGAGGCGGAGAGGAAGGAAGAGGCATTGGCGGAGCTGAAGCGAGTGGTGAAGGAGTTGCGCGAAGAAGACCTCACGATGCGGAGAATCGCGGCGGCGAGAGTGAGGTCGCTAGCCAAGGAAGATTCCGAAGCGAGAGCGAATCTCGCAATGCTAGGAGCAATTCCCCCTCTCGTCGGAATGCTCGACTCGGAAGACACGAATTCGCAAATCGCTTCGCTCTATGCTTTGCTCAATCTCGGAATCGGCAACGATGCAAACAAAGCGGCTATAGTGAAAATAGGCACTGTACACAAGATGCTGAAGCTAGTTGAATCGAGTGATTCGGATTCGTCGGTGGCCGAAGCGATTGTTGCGAATTTCCTTGGATTGAGTGCTTTGGATTCGAATAAACCGATAATTGGATCCTCCGGTGCAATACCGTTCCTGGTTAGCACCCTAAAACATTTAGACGCTACTAAAACCGTATCACAATCCCAGTCGCAAGTGAAGCAAGATGCTCTGCGCGCTTTGTACAATCTTTCGATCTGTCAGAGCAACGTTTCGGTGGTTTTGGAGACTGATTTGGTTTGGTTTTTAGTGAGCGCGATGGGGGACATGGAAGTGAGCGAGAGGAGTCTGGCGATTCTGAGCAATTTAGTGTCGACTCCGGAGGGAAGAAAAGCGATCAGTGGTGTGAGGGACGCCATTCCGATTCTGGTGGATGTGTTGAGTTGGACGGACTCGCCAGAGTGCCAAGAGAAGGCGTCGTATGTGCTGATGATTATGGCACACAGAACATACGGGGACAGGCTTGCCATGATCGAGGCAGGGGTTGTGTCGTCGCTGCTTGAGTTGACGCTTGTCGGAACCACGTTAGCTCAGAAGAGGGCCTCCAGAATATTGGAGTGTTTGAGGGTGGATAAGGGGAAACAGGTCTCTAGGAGCTACGCTGCAAATTTGAATTTGGGTGTCTCTGCTCCTATTTGTGGTGGCTCTTCTTCATCCGAGGGTGGTGGTGGAGGAGGAGGAAAAGGGTCCTTGGTGGAGGATCAAGATGGAATGGTGATGAGTGAGGAAAAGAAAGCGGTGAAACAGTTAGTGCAGCAGAGTCTGCAGAATAACATGATTAAAATCGTGAAGAGGGCCAACTTGCGTCAGGATTTCGTTCCATCTGCCCAAATTGCTTCACTCACTTCGAGTTCCACTTCAAAGAGCCTCCCATTTTGA 1482 0.527 MAKCHRNNVGSIALDHRHTAKNATAGSHFRVLRRLIFDAVSCGGTSRYRYRQRGSDDGDVGDFSSEASHAEKEERSEKLSDLLNAAEMKTEAEAERKEEALAELKRVVKELREEDLTMRRIAAARVRSLAKEDSEARANLAMLGAIPPLVGMLDSEDTNSQIASLYALLNLGIGNDANKAAIVKIGTVHKMLKLVESSDSDSSVAEAIVANFLGLSALDSNKPIIGSSGAIPFLVSTLKHLDATKTVSQSQSQVKQDALRALYNLSICQSNVSVVLETDLVWFLVSAMGDMEVSERSLAILSNLVSTPEGRKAISGVRDAIPILVDVLSWTDSPECQEKASYVLMIMAHRTYGDRLAMIEAGVVSSLLELTLVGTTLAQKRASRILECLRVDKGKQVSRSYAANLNLGVSAPICGGSSSSEGGGGGGGKGSLVEDQDGMVMSEEKKAVKQLVQQSLQNNMIKIVKRANLRQDFVPSAQIASLTSSSTSKSLPF* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00289 493 Pfam Armadillo/beta-catenin-like repeat 134 171 IPR000225 GO:0005515
Phac9g00289 493 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 144 186 IPR000225 GO:0005515
Phac9g00289 493 Gene3D - 62 246 IPR011989 -
Phac9g00289 493 Gene3D - 247 406 IPR011989 -
Phac9g00289 493 SUPERFAMILY ARM repeat 104 389 IPR016024 -
Phac9g00289 493 Coils Coil 69 117 - -
Phac9g00289 493 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 26 493 - -
Phac9g00289 493 MobiDBLite consensus disorder prediction 51 79 - -
Phac9g00289 493 SMART arm_5 133 173 IPR000225 GO:0005515
Phac9g00289 493 SMART arm_5 218 267 IPR000225 GO:0005515
Phac9g00289 493 SMART arm_5 307 349 IPR000225 GO:0005515
Phac9g00289 493 SMART arm_5 268 306 IPR000225 GO:0005515
Phac9g00289 493 SMART arm_5 175 217 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00289 Phac-Chr9 1881437 1883960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00289 99 390 U-box Gene Family AT2G23140 33.559 1.61e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00289 - - gmx:100818576 723.391