Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g00238 | ATGGAGAATGATTGCATAGAGGAGATGGACATTGAGGCTCTTCCTTCAATGTGGCCTGAAGATATTGGAACTGATGTTGGAAAGCAGTTTAATATAGAAAAGCCTGGAAGGGACCAAGACATGTTAGAGGAGGTTACGATCATAGAGGAGCCAACTATAGTTGATTTCAAGCGTCTCATGGAGCTTACAAATTTTACAGAAAAGGGGTCTTCTCAGTTGGCGTACCTAATGAAACATTGGGAGTACAAACAGGCCAATGTTGTGCGTCTTCTCAGGGAAGAGCTCGACAACCTAAGCAAACAAAGGCAGGATGTTGAGCTCAGGAAATTGGAGATATTGGAAGAGCATCGATTTGAGGAAGAAAGATATGGGGGTGATAAACGCCCAGTTTCTATTTTGGATGACGTTTATGATGGTATATGGCCTGATATACCTTGCAGGAAAAGTGATGCTGTGGTTCAAAACAAGAGGAACGAGGTTGATGCTGAGTATGACACTGTCATGTACTGGAAACAGCGAGTTTTGCAATTAGAGAAGCAGCTTGAGGCAAGTATCCAAAGGGAACAGATACTTGAAGAAAAGTTGCAAGAAAGTATAGCAAACATTGAAAGGCAGTCCTCACCGGTGGAAGAACTGTCCCAGATCCTGAAAAGGGCAGACAATTTCTTGCATTTTATACTCCAAAATGCACCTGTTGTTATTGGCCACCAGGACAAAGATTTGCGCTATTGCTTTATATACAATCATTTTCCAAGTTTACAAGAAGAGGACATCATAGGAAAAACAGATGTTGAAATATTCACGGGAGCTGGTGTTAAGGAATCTCAAGAGTTTAAGAGAGAAGTTTTGGAAAAAGGATTACCTGCAAAAAGGGAAATCACTTTTGAGACAGAACTGTTTGGGTCAAAGACATTTTTGATATATGTAGAACCTGTGTTTAGCAAAGCAGGGGAGACAATTGGAATAAATTACATGGGAATGGATATAACAGATCAGGTGAGAAAAAGGGAAAGGATGGCAAAGATTCGGGAAGAGATTGCTGTCCAGAAAGCCAAGGAAACAGAGCTGAATAAAACCATTCACATTACAGAGGAAACTATGCGAGCAAAACAAATGCTGGCAACAATGTCTCACGAGATAAGATCTCCTTTGTCTGGGGTTGTTAGCATGGCTGAAGTTCTTTCTAACACAAAGCTTGATTGGGAGCAAAGACAACTCTTGGATGTCATGCTATCTTCTGGAGATTTGGTTCTTCAACTTATAAATGACATACTTGATCTTTCCAAGGTTGAGTCAGGAGTCATGAAATTGGAAGCTACTAAATTCCGGCCAAGAGAGGTAGTCAAACATGTACTCCAGACTGCTGCAGTTTCATTGCAAAAAATACTAACCTTGGAAGGACATGTAACTGATGATGTACCTATTGAGGTCGTTGGTGATGTTTTAAGGATGCGGCAAATTCTCACAAATTTAATTAGCAATGCCGTCAAGTTTACCCATGAAGGCAAAATTGGAATAAACCTTTACGTTGTGCCAGAACCTACTTTTGCAAAGGCAGAATGCATCCAAAAGATGACTTCAAAGCATTCAACTATTTCAGTCAATGGTTTGAAAGAAGAGAAATATCTATCAACGCCTCAATGTGGCAGCGATAGAAATCTTCTTGGTGGTTGTCAAAAACATGATGATTGTCCCAGCCAAAACCATGCATTCAATGATGAATGTAGATCACCTATCAAAAGCGAATGCTCAATGAATGGAGACACTGAGGAGCAACCTTATTCAGCTGGAACAACAGTGTGGATACGTTGTGATGTATATGACACGGGCATTGGAATACCAGAAGATGCTATACCAACCTTGTTTAAAAGGTACATGCAAGTCAGTGCAAACCATGCTCGAAAGTACGGTGGCACAGGGCTAGGACTAGCAATATGCAAACAGCTGGTTGAGTTGATGGGGGGTCGTCTAACCGTGTCTAGCAAAGAACACTATGGTTCTACCTTCACTTTCATACTCCCTTACAAGGTTTCAATTGCTTGTGATAATTCTGATGACCAGGATGAGCTGTCTGATGTAGAGAATAATGATGCTGCATCTGATGATACAATAGAGAGTTTCTTCCAATTCCAGCCACGCACTTTGGGCTCTCTATTCTCCTCTAATGGATCTAGCAGGACACAGATGTTATTACCAAACAAAATTGGCTACACAAGCTCCCATAAACCTGGCGGCTTTTCTGAGAGTTTATATTCAATCCTCTCGAATGATATCATGTCAAAAGAGACATGCTCAGTTGATGATTCATCTTCAGTTGTTGATGGTCCAGAGACGTCTGAATCGGCCAGTTCATATGGTCACAGCTCAGAAACAAAGAACAGAAGTTTAGTTGGCAGAGATAAACTGCAGCAAGATAAGGCTCATACTTGGTCCATGAATGGTTATGCAGATTCCTCTGAAGCAACTGTGGCAAGTGGAGAAACCCAACAAACATGTCAGGGTCATGGGAAGACCAACACAATTGTCCAATCAAGCAACAGTACACCAGGAGTAACCAAATCCTCATTAAGGCCTAAGATCCTTCTTGTTGAAGATAACAAGATTAATATCATGGTGACACAGTCCATGATGAAGCAATTAGGCCTTAGCATAGATGTTGTGAATAATGGAGTGGAAGCTGTACGTGCAGTTCAGCGCAGCACTTTTGACCTGATTCTGATGGATGTCTGCATGCCAGTTATGAATGGTCTTCAAGCAACCAAACTGATTCGATCTTTTGAGGAAACAGGCACTTGGGATGCTGCAAGAAACGCTGGAATCGAGCAAAGTGTACCAGATTCAGATTATGAATGTTCTGAACCTTCTAAAAAGCGGATTCCCATTGTTGCTATGACAGCAAATGCTTTCTCAGAGAGTGCTGAAGAGTGCTATGCAAATGGATTGGACTCGTTTGTGTCAAAACCTGTAACTTTCCAAAAACTGAAAGAATGTATTGAACAGTACCTAAGGTGA | 3012 | 0.4127 | MENDCIEEMDIEALPSMWPEDIGTDVGKQFNIEKPGRDQDMLEEVTIIEEPTIVDFKRLMELTNFTEKGSSQLAYLMKHWEYKQANVVRLLREELDNLSKQRQDVELRKLEILEEHRFEEERYGGDKRPVSILDDVYDGIWPDIPCRKSDAVVQNKRNEVDAEYDTVMYWKQRVLQLEKQLEASIQREQILEEKLQESIANIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKDLRYCFIYNHFPSLQEEDIIGKTDVEIFTGAGVKESQEFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDITDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEVLSNTKLDWEQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAVSLQKILTLEGHVTDDVPIEVVGDVLRMRQILTNLISNAVKFTHEGKIGINLYVVPEPTFAKAECIQKMTSKHSTISVNGLKEEKYLSTPQCGSDRNLLGGCQKHDDCPSQNHAFNDECRSPIKSECSMNGDTEEQPYSAGTTVWIRCDVYDTGIGIPEDAIPTLFKRYMQVSANHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHYGSTFTFILPYKVSIACDNSDDQDELSDVENNDAASDDTIESFFQFQPRTLGSLFSSNGSSRTQMLLPNKIGYTSSHKPGGFSESLYSILSNDIMSKETCSVDDSSSVVDGPETSESASSYGHSSETKNRSLVGRDKLQQDKAHTWSMNGYADSSEATVASGETQQTCQGHGKTNTIVQSSNSTPGVTKSSLRPKILLVEDNKINIMVTQSMMKQLGLSIDVVNNGVEAVRAVQRSTFDLILMDVCMPVMNGLQATKLIRSFEETGTWDAARNAGIEQSVPDSDYECSEPSKKRIPIVAMTANAFSESAEECYANGLDSFVSKPVTFQKLKECIEQYLR* | 1004 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g00238 | 1003 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 479 | 675 | IPR003594 | - | |
Phac9g00238 | 1003 | CDD | REC_hyHK_CKI1_RcsC-like | 860 | 998 | - | - | |
Phac9g00238 | 1003 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 367 | 433 | IPR036097 | GO:0000155|GO:0007165 | |
Phac9g00238 | 1003 | MobiDBLite | consensus disorder prediction | 766 | 792 | - | - | |
Phac9g00238 | 1003 | CDD | HATPase_EvgS-ArcB-TorS-like | 484 | 674 | - | - | |
Phac9g00238 | 1003 | MobiDBLite | consensus disorder prediction | 822 | 853 | - | - | |
Phac9g00238 | 1003 | SMART | HKATPase_4 | 479 | 677 | IPR003594 | - | |
Phac9g00238 | 1003 | ProSiteProfiles | Response regulatory domain profile. | 859 | 1002 | IPR001789 | GO:0000160 | |
Phac9g00238 | 1003 | SMART | REC_2 | 858 | 998 | IPR001789 | GO:0000160 | |
Phac9g00238 | 1003 | Gene3D | - | 434 | 680 | IPR036890 | - | |
Phac9g00238 | 1003 | FunFam | Putative histidine kinase 5 | 356 | 433 | - | - | |
Phac9g00238 | 1003 | PRINTS | Bacterial sensor protein C-terminal signature | 602 | 616 | IPR004358 | GO:0016310|GO:0016772 | |
Phac9g00238 | 1003 | PRINTS | Bacterial sensor protein C-terminal signature | 661 | 674 | IPR004358 | GO:0016310|GO:0016772 | |
Phac9g00238 | 1003 | PRINTS | Bacterial sensor protein C-terminal signature | 637 | 655 | IPR004358 | GO:0016310|GO:0016772 | |
Phac9g00238 | 1003 | ProSiteProfiles | Histidine kinase domain profile. | 375 | 677 | IPR005467 | - | |
Phac9g00238 | 1003 | Pfam | His Kinase A (phospho-acceptor) domain | 370 | 433 | IPR003661 | GO:0000155|GO:0007165 | |
Phac9g00238 | 1003 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 422 | 675 | IPR036890 | - | |
Phac9g00238 | 1003 | Coils | Coil | 88 | 115 | - | - | |
Phac9g00238 | 1003 | FunFam | Histidine kinase 5 | 852 | 1003 | - | - | |
Phac9g00238 | 1003 | Gene3D | - | 852 | 1003 | - | - | |
Phac9g00238 | 1003 | Gene3D | - | 356 | 433 | - | - | |
Phac9g00238 | 1003 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 213 | 330 | IPR035965 | - | |
Phac9g00238 | 1003 | FunFam | Histidine kinase 5 | 210 | 345 | - | - | |
Phac9g00238 | 1003 | Pfam | Response regulator receiver domain | 860 | 927 | IPR001789 | GO:0000160 | |
Phac9g00238 | 1003 | PANTHER | TWO-COMPONENT HISTIDINE PROTEIN KINASE | 9 | 1002 | - | - | |
Phac9g00238 | 1003 | Coils | Coil | 174 | 205 | - | - | |
Phac9g00238 | 1003 | Gene3D | PAS domain | 209 | 345 | - | - | |
Phac9g00238 | 1003 | SUPERFAMILY | CheY-like | 858 | 1003 | IPR011006 | - | |
Phac9g00238 | 1003 | MobiDBLite | consensus disorder prediction | 766 | 799 | - | - | |
Phac9g00238 | 1003 | CDD | HisKA | 367 | 429 | IPR003661 | GO:0000155|GO:0007165 | |
Phac9g00238 | 1003 | SMART | HisKA_10 | 368 | 433 | IPR003661 | GO:0000155|GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g00238 | Phac-Chr9 | 1570592 | 1575667 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac9g00238 | 1 | 539 | Histidine Kinase Gene Family | AT5G10720 | 67.904 | 0.0 | 728 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Phac9g00238 | HATPase_c | 2.4e-27 | CL0025 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g00238 | - | - | gmx:100819520 | 1718.75 |