Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00232 ATGGACATGGACATGGAGAAGCATGCCATGAGTGGTGCTGGTGATTCGACGAGTGAGCACAAGGTGTACAAAGGGGTGAGAAAGAGAAAGTGGGGGAAATGGGTTTCTGAAATCAGACTTCCCAATAGCCGTGAACGCATATGGCTAGGGTCTTATGACTCTCCTGAAAAAGCAGCACGAGCCTTCGATGCTGCCCTTTTCTGTCTGCGTGGTCGCAATGCCAATTTCAACTTCCCCAACACTCCTTGCAGCATGGACACCAATGTGCCTCTGGCTGCTCCCCAATCTCTTACTCCACACCAGATTCAAGAGGTTGCTGCTAAGTTTGCAAACGAGAACCCATTACTACTAAAACCTCTTACACAAGAATCTCAACGTGATGCTGCTGATGGGAATTCTTCATCATTTGGAGTGATGTTGTGTAAATCTGACAGCGTAGCAGGGAGTAGTTCTAGTACCACCAGCACCCCCACCACCACTGCCTCGTCATGTTCTACTACTACTATGCATGAATGTGATGGAACGGTGCTAGTGGGCCATGGGGACATGGATTGGACATTCTTGAAAGAGTTTGATTACTCCAACGAAGTTTTTCCCGTTGGATCCGACTATGATCCCTATTTTGAGCTACACAAGATGCACTCAACTTCAGGTGAGTTATTGTATTCCACTCCACCTCCACCTCCTTTTGAAGGTTACCAAGAATTGATTGATGCTGAAGAAGATCCCTTTTCTCACCAATCATTCCTTTGGAATTGGAACTTTTGA 768 0.4648 MDMDMEKHAMSGAGDSTSEHKVYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALFCLRGRNANFNFPNTPCSMDTNVPLAAPQSLTPHQIQEVAAKFANENPLLLKPLTQESQRDAADGNSSSFGVMLCKSDSVAGSSSSTTSTPTTTASSCSTTTMHECDGTVLVGHGDMDWTFLKEFDYSNEVFPVGSDYDPYFELHKMHSTSGELLYSTPPPPPFEGYQELIDAEEDPFSHQSFLWNWNF* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00232 255 MobiDBLite consensus disorder prediction 1 21 - -
Phac9g00232 255 SUPERFAMILY DNA-binding domain 22 79 IPR016177 GO:0003677
Phac9g00232 255 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Phac9g00232 255 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 178 - -
Phac9g00232 255 Gene3D AP2/ERF domain 22 80 IPR036955 GO:0003700|GO:0006355
Phac9g00232 255 MobiDBLite consensus disorder prediction 146 167 - -
Phac9g00232 255 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Phac9g00232 255 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Phac9g00232 255 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Phac9g00232 255 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Phac9g00232 255 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Phac9g00232 255 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00232 Phac-Chr9 1483347 1484322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00232 5 111 AP2-EREBP Transcription Factor Family AT1G74930 66.055 9.09e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac9g00232 AP2 2.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00232 - - vra:106760431 410.609