Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g00221 | ATGAATTTGAACAATGATTTACCAGGCCATAACCAGAATCAAAGTAAAAAACGAAAGCAACCCGATGCAGATAATTCTCCATACCTAGAATTTTCTAATTCCAACATGAACCCCAGAAGGTATCAGGTAGAGGTGTTTCAAGTTGCATGGAGAAGGAACACAATAGCTGTGTTGGATACAGGCTCTGGTAAGACCTTGATTGCTGTGATGCTTATGAAAGAGGTTGGTCAAACCATCAAGACTTTGGCAGTGAAGAAGCTGATTGTTTTTTTGGCTCCCACAGTTCATCTTGTCAACCAGCAATTCAATAATATAAAATATCTGACAGATTTTCAAGTTGAGGAGTACTATGGGGCTAAAGGAGTTGATACATGGACTATGAAGACATGGGAGAAGGAGATTAGTACTAATGATGTATTGGTTATGACACCCCAGATTCTTTTAGATGCCTTAAGAAAAGCATTCCTGCGTATGGAAATGATATGCTTGATTGTTATTGATGAATGTCATAGAGCAACCGGCAACCATCCATATACAAAAATAATGAAGGAATTTTATCACCAAGCAAATGAAAAGCCAAAGATTTTTGGGATGACAGCATCACCAGTTGGTAAAAAAGGTGTTTCCTCTTCTACGGATTGTGAGGATCAAATATCAGAACTTGAAAGCATCTTGGATGCTAAGAGATATACAATTGAAGATCGGACAGAGATGGATGGATATATATTGTCTGCTCAAGAGAGTTGTAGATATTATGACCAAGCACGATTTTCTGCGTTGAGTTTGAAACCAAAGATTGAAGCCTTGTGGTTCAAGTTTGATGCATTGTTATCAGAAAATAAAAGTAACTATATGGATGTGGAAAATAAATTTAAGACACTGTCTCAACGGATGTCCAATGAACTTGGAAAAATTTTACATTGCCTTGAAGATCTTGGAATCCTATGTGCTTATGAGGCAGTTAAAATCTGTCATGAGAATTTCTCCAAAACTGAAGGAATGTGTGAAATTTACAGAACAGGTTATCTTCAGTGTATTACTTTTGTTGAAGAAGTAATAAAATTAATAGAAGAATCCCTCCATCTAGCTGATAAAAATATTTTGGGGGTTGATTTTGATTATTCGAAGGCAGAAGATATGGGATACATATCTCCAAAATTACTTGAACTTATTAAAATCTTCCAATCACTTGGAGAATCTAGTCAGGTGGTGTGCCTTATTTTTGTTGATAGAATCATTACAGCTAAGGTGATTGAAGGATTTGTAAAGAAAGTTCCCCAGATTTCTCATTTCTCAGTTTCGTATTTAACTGGAAATAATACATCGGTTGATGCTGTGGCTCCTAAAAGGCAGAAGGAGATATTGGATTCTTTTCGTTCTGGAAAGGTCAATCTATTATTTACTACTGATGTACTTGAGGAAGGAATTCATGTGCCAAACTGCTCATGTGTGATACGGTTTGACCTCCCAAAGACGGTTCGTAGTTATGTCCAATCTCGTGGAAGATCTAGGCAGGCTAACTCCCAATTTGTTGTGATGTTGGAGAGGGGAAACCTGAAGCAAAGAAATCAACTCTTTGACATCATTAGGAGTGAGCGCTCCATGACTGATGCATCTATGAATAAGGACCATGAATCTAGTTTAAGGGTATGTACGATGGGGAAAACAGAGGCATACTATGTGGAATCTACCGGAGCTTCTGTGACTTTAGATTCTAGTGTTAATCTTATCCACCGATACTGTGGAACACTTCCACGAGATCAGTACTCCTCTGCAAAGCCCAGTTATGTGTTTCTACCAGTGGAAGGGGGTTACCAATGTAAATTAACATTACCATCTAATTCAGCCCTCCAGACAATAATTGGTCCTTCAGGAAAAGATATTCGTTTGGCAAGACATCTTGCTTGTTTTGAAGCTTGTAAGAAGTTGCATCAAATGGGTGCCTTAAATGAACATTTGGTTCCATTCATTGAAAATCATTCAGAAGATGACCATATTGTGAAAAATAAAGAATCTAGTTCGGGGGCAGGAACCACAAAAAGAAAGGAGTTACATGGAACAGCCAACATTCGTGCACTAAATGGTGCATGGGGAGATAAACTTGATGATGCAGCCAGATTTTTTTCCTATAAACTAGAGTTTGCATGTAGTATTGTTAGTGAAATATACTCTGGGTTTGTTCTTTTGATTGAGTCAAAGCTTGATGATGATGTGGGAAATATAGATTCAGATCTTTATTTAGTCTCAAAGACCGTGAAAGCTTCTGTCTCTCCGTGTGGGCAAGTTGATTTGGATGCTAAACAGATGATGAAAGCAAAATGCTTCCATGAGCTTTTTTTCAACGGTTTGTTTGGTAGATTGGTGTTTAGGTCAAAATCAGCAGGAGGAGGAACAGAATTTTTACTTCAAAAAGACACAAAATCATTGTGGAGAGAAAAACACTTATATTTGCTTCTACCACTTGAGAAATTGAATGGTATTTGTGGGGGAGCCTTCCAAATTAATTGGCATGGAATCAGTTCTTGTGCATCTGCTATTGAATTCTTAAGGAGGAAATTTTCTCTTGGCACTGGAGATTGTGATGATAACGGAATAATCACATCACCTCAGGATACCAGTTCAATGGAGATTGAATATGTTGGAACAAACAAGATTCACTTTGCTAATTGTGTGGTTGATGCGGACAATATAAAAGACACGTTAGTTTTGGCCATTCACACTGGAAAAATATATTGTATTATTGACATCGACAGTAACTTATCTGCTGAAAGTCCTTTCTGTGAAAAGTCCAAGGACCACGTTACCTTCTCAGATTATTTCAGCAAAAGGTATGGGATTACACTGAGACATCCAAGACAGTCTCTTTTACTATTAAAGCAAAGTCATAATCCACACAATCTTCTTTTTAACTTCCACGAGGAAGATGGACGAGACAAGTCATCACAAATTGGCTCTACAACCTCCAAAGTGCCTGCACATGTCCACGTCCCACCTGAGCTTCTATTTGTTCTTGATTTTAAAAGAAACGTGTTGAGGTCATTGTACTTGTTACCATCTCTAATGTACCGCATTGAATCGTTAATGTTATCTAGTCAGCTTAGAGAAGAGATAGATGGTCAAACTAGCAAGTCCAACATAAATAGCTCACTGATTCTAGAAGCACTTACAACTTTGAGATGCAGTGAAAGCTTTTCAATGGAACGTCTTGAGTTGCTAGGAGATTCTGTTTTGAAATATGTAGTGAGCTGTCACCTCTTTCTTAAATATCCCAAGAAACACGAAGGACAATTATCTACCAGACGATCACTAGCAGTTTGTAATTCAACGCTTCATAAACTGGCAATAGATCGCAAATTACAGGGTTATATTCGAGACTCTGCATTTGAACCACGTCGTTGGGTTGCTCCAGGACAGCGTTCTATACACCCTGTTTGTTGTGATTGTGGATTGGATACCCTTGAAGTGCCTTTAGATGTTAAATTCCACACCGAGGATCCAAAAGTTGTGGTTGGGAAGTTTTGTGACAGGGGTCACCGCTGGATGTGTTCTAAGACTATTGCTGACTGTGTTGAAGCTCTGATAGGAGCATACTATGTGGGTGGTGGACTCTTTGCATCACTCAATGTGATGAAATGGCTTGGAATTGGCACTGAACTTGAACTATCCTTGGTTGACGAAGCAATCACTGCTGCCTCTCTGCATAGTTGCGTGCTAAAAGAAAGTGAGATTGAATGCCTTGAAAAGAAAATTGGGTATGAATTTTCTGTCAAGGGACTCTTACTGGAGGCTATCACACATTTGTCTGAGAAAGAACTTGGTATTGGCTGCTGTTATGAGAGACTCGAATTTCTTGGTGATTCGGTGTTGGACCTGCTTATCACATGGCATCTATATCAGAGTCACACAGATATTGATCCAGGGGTGTTGACTGACTTACGATCTGCTTCTGTCAATAATGACAATTTTGCTCAAGTTGCTGTTAGACATAACCTTCACCAGCATCTCCTACATGGCTCGGGATTATTACTGAGCCAGATATCAGAATATGCGAAGGCCATTTCTGAATCAGATCCTAGATCACTTCCAAGCATTAGAGCTCCGAAGGCACTTGGAGATCTAGTGGAAAGTATTGTTGGGGCTATGCTAATTGATACCAAGCTCAGTCTTGACCAAGTGTGGGAGGTTTTCTGTCCTCTATTATCCCCCATAGTTACACCTGAAAAACTTGAATTGCCTCCATTTCGCGAATTAAATGAGTTGTGTGATTCTCTTGGGTATTTTGTAAAAGTAAATGAAAATTGTGAAAAAAAGGGATCCATGGTGCATGTTGAGGTTAGTGTACAGTTGCTAAATGATCTGTTGGTTCGTGAAGGAAAGGGGGTAAATAAAAAAACTGCAAAAGGAGAAGCTTCATTTCATTTGTTGAAGGATCTTGAGAAGCGGGGAATTTCATATTATAATTTCATGTCCAAGGGAAAAAGAGATAATTCTGTCCATATGAGTGATTCACCTCATCTGAAAAGGGATTCTAGTACTTGTTTTACTCTAATTGAAGAACATTCCTCAGAGCCGGTACTTAAAAGGAACAGATTGGATGGAACTGACCCAACTGAAAGTATTTTGCCTCTCAAAGACTCTTCCAATGACGACTCTGGTTTTAGTGCTTCCATTCCAGTTAATTTATCAACTAATATGAAAAAGGGAGGACCACGGACCACACTATTTGAGGTGTGTAAGAAACAACAGTGGCCAATGCCTACATTTGATTCAACTGAATATAAAGATAGATCTCTATTTGAATCCTGTGAAGGCCTGCAAGGAAGCAAGGGACTTAACTGTTTTGTTTCAAAAATTACCTTGTGCATACCCAAGTATGGAAATATAGAGTGCCAAGGAGAAGCTAGAAGTGATAAGAAGAGCTCCTTTGACTCTGCTGCAGTTGAAATGCTTCTTGAGCTGCAAAAACTGGGAAAAGTTGAAATTGATCCTCCCCTTTCTAGTTAG | 5004 | 0.3881 | MNLNNDLPGHNQNQSKKRKQPDADNSPYLEFSNSNMNPRRYQVEVFQVAWRRNTIAVLDTGSGKTLIAVMLMKEVGQTIKTLAVKKLIVFLAPTVHLVNQQFNNIKYLTDFQVEEYYGAKGVDTWTMKTWEKEISTNDVLVMTPQILLDALRKAFLRMEMICLIVIDECHRATGNHPYTKIMKEFYHQANEKPKIFGMTASPVGKKGVSSSTDCEDQISELESILDAKRYTIEDRTEMDGYILSAQESCRYYDQARFSALSLKPKIEALWFKFDALLSENKSNYMDVENKFKTLSQRMSNELGKILHCLEDLGILCAYEAVKICHENFSKTEGMCEIYRTGYLQCITFVEEVIKLIEESLHLADKNILGVDFDYSKAEDMGYISPKLLELIKIFQSLGESSQVVCLIFVDRIITAKVIEGFVKKVPQISHFSVSYLTGNNTSVDAVAPKRQKEILDSFRSGKVNLLFTTDVLEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRSRQANSQFVVMLERGNLKQRNQLFDIIRSERSMTDASMNKDHESSLRVCTMGKTEAYYVESTGASVTLDSSVNLIHRYCGTLPRDQYSSAKPSYVFLPVEGGYQCKLTLPSNSALQTIIGPSGKDIRLARHLACFEACKKLHQMGALNEHLVPFIENHSEDDHIVKNKESSSGAGTTKRKELHGTANIRALNGAWGDKLDDAARFFSYKLEFACSIVSEIYSGFVLLIESKLDDDVGNIDSDLYLVSKTVKASVSPCGQVDLDAKQMMKAKCFHELFFNGLFGRLVFRSKSAGGGTEFLLQKDTKSLWREKHLYLLLPLEKLNGICGGAFQINWHGISSCASAIEFLRRKFSLGTGDCDDNGIITSPQDTSSMEIEYVGTNKIHFANCVVDADNIKDTLVLAIHTGKIYCIIDIDSNLSAESPFCEKSKDHVTFSDYFSKRYGITLRHPRQSLLLLKQSHNPHNLLFNFHEEDGRDKSSQIGSTTSKVPAHVHVPPELLFVLDFKRNVLRSLYLLPSLMYRIESLMLSSQLREEIDGQTSKSNINSSLILEALTTLRCSESFSMERLELLGDSVLKYVVSCHLFLKYPKKHEGQLSTRRSLAVCNSTLHKLAIDRKLQGYIRDSAFEPRRWVAPGQRSIHPVCCDCGLDTLEVPLDVKFHTEDPKVVVGKFCDRGHRWMCSKTIADCVEALIGAYYVGGGLFASLNVMKWLGIGTELELSLVDEAITAASLHSCVLKESEIECLEKKIGYEFSVKGLLLEAITHLSEKELGIGCCYERLEFLGDSVLDLLITWHLYQSHTDIDPGVLTDLRSASVNNDNFAQVAVRHNLHQHLLHGSGLLLSQISEYAKAISESDPRSLPSIRAPKALGDLVESIVGAMLIDTKLSLDQVWEVFCPLLSPIVTPEKLELPPFRELNELCDSLGYFVKVNENCEKKGSMVHVEVSVQLLNDLLVREGKGVNKKTAKGEASFHLLKDLEKRGISYYNFMSKGKRDNSVHMSDSPHLKRDSSTCFTLIEEHSSEPVLKRNRLDGTDPTESILPLKDSSNDDSGFSASIPVNLSTNMKKGGPRTTLFEVCKKQQWPMPTFDSTEYKDRSLFESCEGLQGSKGLNCFVSKITLCIPKYGNIECQGEARSDKKSSFDSAAVEMLLELQKLGKVEIDPPLSS* | 1668 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g00221 | 1667 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 45 | 220 | IPR014001 | - | |
Phac9g00221 | 1667 | FunFam | Endoribonuclease dicer-like 1 | 568 | 664 | - | - | |
Phac9g00221 | 1667 | SMART | riboneu5 | 1258 | 1409 | IPR000999 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | SMART | riboneu5 | 1049 | 1222 | IPR000999 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | ProSitePatterns | Ribonuclease III family signature. | 1279 | 1287 | IPR000999 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | ProSiteProfiles | PAZ domain profile. | 894 | 1005 | IPR003100 | GO:0005515 | |
Phac9g00221 | 1667 | PANTHER | DICER-RELATED | 52 | 1487 | - | - | |
Phac9g00221 | 1667 | FunFam | Dicer-like 104 | 885 | 1002 | - | - | |
Phac9g00221 | 1667 | FunFam | Endoribonuclease dicer-like protein | 33 | 271 | - | - | |
Phac9g00221 | 1667 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Phac9g00221 | 1667 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 86 | 514 | IPR027417 | - | |
Phac9g00221 | 1667 | ProSiteProfiles | Dicer double-stranded RNA-binding fold domain profile. | 573 | 663 | IPR005034 | GO:0016891 | |
Phac9g00221 | 1667 | FunFam | Endoribonuclease dicer-like 1 | 1238 | 1407 | - | - | |
Phac9g00221 | 1667 | Gene3D | Dicer dimerisation domain | 568 | 666 | IPR038248 | - | |
Phac9g00221 | 1667 | Gene3D | Ribonuclease III domain | 1031 | 1213 | IPR036389 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | SMART | PAZ_2_a_3 | 869 | 1029 | IPR003100 | GO:0005515 | |
Phac9g00221 | 1667 | SUPERFAMILY | RNase III domain-like | 1041 | 1220 | IPR036389 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | SMART | ultradead3 | 34 | 233 | IPR014001 | - | |
Phac9g00221 | 1667 | Pfam | Dicer dimerisation domain | 573 | 658 | - | - | |
Phac9g00221 | 1667 | Pfam | Helicase conserved C-terminal domain | 398 | 503 | IPR001650 | - | |
Phac9g00221 | 1667 | Gene3D | - | 376 | 541 | IPR027417 | - | |
Phac9g00221 | 1667 | Gene3D | Ribonuclease III domain | 1239 | 1409 | IPR036389 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | FunFam | Dicer-like 104 | 1025 | 1214 | - | - | |
Phac9g00221 | 1667 | SMART | helicmild6 | 412 | 506 | IPR001650 | - | |
Phac9g00221 | 1667 | CDD | RIBOc | 1259 | 1407 | IPR000999 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | SUPERFAMILY | RNase III domain-like | 1242 | 1406 | IPR036389 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | MobiDBLite | consensus disorder prediction | 1527 | 1547 | - | - | |
Phac9g00221 | 1667 | CDD | DEXHc_dicer | 36 | 234 | - | - | |
Phac9g00221 | 1667 | Gene3D | - | 32 | 268 | IPR027417 | - | |
Phac9g00221 | 1667 | CDD | SF2_C_dicer | 382 | 514 | - | - | |
Phac9g00221 | 1667 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 386 | 544 | IPR001650 | - | |
Phac9g00221 | 1667 | Gene3D | paz domain | 881 | 1003 | - | - | |
Phac9g00221 | 1667 | ProSiteProfiles | Ribonuclease III family domain profile. | 1243 | 1386 | IPR000999 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | ProSiteProfiles | Ribonuclease III family domain profile. | 1030 | 1202 | IPR000999 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | Pfam | PAZ domain | 895 | 1026 | IPR003100 | GO:0005515 | |
Phac9g00221 | 1667 | Pfam | Ribonuclease III domain | 1067 | 1201 | IPR000999 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | Pfam | Ribonuclease III domain | 1279 | 1385 | IPR000999 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | CDD | RIBOc | 1049 | 1213 | IPR000999 | GO:0004525|GO:0006396 | |
Phac9g00221 | 1667 | FunFam | Endoribonuclease dicer-like 1 | 377 | 540 | - | - | |
Phac9g00221 | 1667 | Gene3D | - | 1576 | 1656 | - | - | |
Phac9g00221 | 1667 | Pfam | Type III restriction enzyme, res subunit | 51 | 202 | IPR006935 | GO:0003677|GO:0005524|GO:0016787 | |
Phac9g00221 | 1667 | SUPERFAMILY | PAZ domain | 894 | 1005 | IPR036085 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g00221 | Phac-Chr9 | 1408189 | 1427341 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac9g00221 | 430 | 503 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 37.333 | 1.28e-06 | 50.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g00221 | K11592 | - | gmx:100806831 | 2758.01 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac9g00221 | 9 | 1408189 | 1427341 | Phac9g00221 | 9 | 1408189 | 1427341 | ECH | |
Phac10g01635 | 10 | 39402148 | 39413545 | Phac9g00221 | 9 | 1408189 | 1427341 | ECH |