Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00198 ATGCAAATTGGAGTCTTGGATATATATGGTTTTGAATGTTTTAAGTATAATAGTTTTGAGCAATTCTGCATCAATTTTGCTAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAGGAGGAATACACCAAAGAAGAAATTAACTGGAGCTACATTGAATTTATCGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAGCCCATTGGGATCATTGCTCTGTTAGATGAAGCTTGCATGTTTCCAAAATCAACGCATGAAACATTCTCTACTAAGTTGTTTAAACACTTCCTGTCACACCCAAGGTTAGAAAAGGAGAAGTTTTCAGAAACAGATTTTACTCTTTCTCATTATGCTGGAAAGGTCACTTACCATACAGACACGTTCTTAGACAAAAATCGTGATTATGTAGTTGTAGAACATTGTAATCTATTATCCTCTTCAAAGTTGCCCTTTGTGTCGGCTCTTTTTCCTTTGCTAACAGAGGAATCTTCAAGGTCGTCATACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAAGCACTCATGGAAACACTCAACACAACAGAGCCTCATTACATTCGTTGTGTCAAGCCAAGTTCTTTGAATCAACCACAAAAGTTTGAGAATACTAGTGTCATACACCAATTACGATGTGGGGGTGTCCTTGAGGCTGTTAGAATAAGTCTGGCAGGTTACCCCACTCGAAGGATTTACTCAGAGTTTGTAGATCGCTTTGGATTAATATCTCCTGAATTTATGGATGGAAGCTATGATGACAAAGCTGTAACTCTGAAAATATTGCAAAAGCTAAAGCTTGAGAATTTTCAGTTAGGTAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTTGCATTTTAGACTCTAGACGTGCAGAAGTTTTGGACAACGCTGCAAAATGTATTCAGCGTCAACTGCGAACGTTTATTGCACGCAGGGATTTCATTTCAATTCGTGCTGCTGTACTTTCTCTTCAAGCATGCTGCAGGGGTTGCATTAGCCGAAGGATATATACTTCTAAGCGGGAGACAGCAGCAGCTATTTCTATTCAAAAATACATTCGTATGTGTCTGATGAGGCATGCTTATGTGAAATTATGTTATTCTGCTATAATTGTACAATCCAATGTTCGTGGTTTCACAACTCGTCAAAGGTTCTTGCACAGAAAGGAGCACAAAGCTGCCACTTGCATTCAGGCCTATTGGAGGATGTGCAAGGTTCGATCTGCATTCCTAAAACATCAATATTCAATTGTAGCAATACAATGCCTTTGGCGACGCAGACAAGCAAAAAGAGAGTTCCGTAGACTTAAGCAAGAGGCTAATGAAGCTGGAGCCTTGCGTTTGGCTAAGAATAAACTTGAGAAACAATTGGAAGAGCTTACATGGCGTTTGCATCTTGAGAAAAAAATAAGGATTTCTAATGAAGAGGTTAAGCATGTTGAGATTTCCAAATTACAGAAGACGGTGGAGGCTCTGAATCTTGAATTAGATGCAGCTAAACTTGCAACAATTAATGAGTGCAACAGAAATGCAGTTTTGCAAAATCAGTTGCAATTATCAGTAAAGGAAAAATCTTCTTTAGAAAGAGAGCTAGTTGTAATGGATGAAGTACGAAGGGAAAATGCTCATTTAAAGGGTTCATTGGATGCTTTTGAAAAGAAGAGCACAGCTTTGGAGCTTGAGCTTGTTAATGCTCGGAAAGACCATGACAATACCATTATGAAAATGAGGGAGTTTGAACACAAATGTTCTCAACTTGGGCAAGATGTGAAAAGTCTCCAGGAAAAGCTATTGAGTTTAGAAGATGAAAATCACGTGCTTCGTCAGAAAGCCTTAACTGTGTCTCCCAAGAGTAACCATCGATCTTTAACAAAGTCATTTTCAGAGAGATACTCAAATGCAGTGCCCCGCACTGAGCAAAAGCCCATATTTGAATCGCCCACACCTACAGAACTTATTACCCCTTTTACACATGGAAGTTTGTCAGACTCTCGTAGATCAAAATTAACAGCAGAGAGGCACCAGGATAACAATGAACTCCTCTCTAGGTGTATCAAAGAGGATTTGGGGTTCAAAAATGGTAAACCGTTGGCAGCTTGTATCATATACAAATGTCTTCATCATTGGCATACCTTTGAATCTGAGCGAACAGCCATTTTTGATTACATTGTTGATGGAATTAATGATGTCCTAAAGGTTAGAGATGATGACACTGTCTTGCCATATTGGCTGTCCAATACATCTGCACTTCTTTGCCTCTTGCAAAGGAACTTGCATTCAAATGGCTTTTTAACAGCCACTGCTCAACGTTATGCCAGATCATCCGGCTTGACCAGCAGAATTGGGCATAAGCTGAGGTCTCCATTGAAGCTTATTGGATATGATGATAATACAGTACATGTGGAAGCAAGATATCCAGCTATTCTTTTTAAACAACAGCTGACTGCTTGTGTAGAGAAGATTTTTGGCCTTATACGTGATAATTTGAAAAAGGAGCTTTCTCCACTTCTGACATTATGTATTCAGGCACCTAAAACAGGTCGGATGCTAGGTGGAAAATCATCTAAATCTTCTGGTGGGCTTCCTCCACAATCACCTGTTGCTCAATGGGACAACATGATCAGATTTTTGGACTCATTTATAAGCAGAATGCGTGTAAATCATGTACCGTCCTTTTTCATCCGCAAGCTAGTTACTCAGGTTTTTTCCTTCATCAATATTACACTCTTCAATAGCCTTCTGTTGCGACGGGAATGCTGTACTTTCTCAAATGGTGAATATGTGAAGTCTGGGCTTGCAGAACTGGAGAAATGGATAGTTAATGCAAATGAGGAGTATGCAGGAACATCCTGGCACGAACTGAATTATATAAGGCAAGCTGTTGGGTTTCTGGTAATACATCAGAAGATTAAAAAATCTTTGGAAGAAATTCGGCAGGATCTTTGTCCGGCATTAACAGTCAGGCAAATTTATCGAATCAGTACTATGTACTGGGACGACAAATATGGAACCCAGAGTGTGTCCAACGAGGTAGTTAGTGAAATGAGGGACCTTGTGAGCAAGGACAATCATCAGAGTTTGACATCTAATTCTTTCTTGTTGGACGATGATATGAGCATTCCCTTTTCTGCTGAAGATATAGATATGGCAATCCCTGCTATAAATACTGATGATATTGATCCCCCAGCATTTTTGTGCGAATATCCCTGTGCCAAGTTTCTTACTTTACAGGTGAAGTAA 3285 0.393 MQIGVLDIYGFECFKYNSFEQFCINFANEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFKHFLSHPRLEKEKFSETDFTLSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKLPFVSALFPLLTEESSRSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPSSLNQPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRIYSEFVDRFGLISPEFMDGSYDDKAVTLKILQKLKLENFQLGRTKVFLRAGQICILDSRRAEVLDNAAKCIQRQLRTFIARRDFISIRAAVLSLQACCRGCISRRIYTSKRETAAAISIQKYIRMCLMRHAYVKLCYSAIIVQSNVRGFTTRQRFLHRKEHKAATCIQAYWRMCKVRSAFLKHQYSIVAIQCLWRRRQAKREFRRLKQEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRISNEEVKHVEISKLQKTVEALNLELDAAKLATINECNRNAVLQNQLQLSVKEKSSLERELVVMDEVRRENAHLKGSLDAFEKKSTALELELVNARKDHDNTIMKMREFEHKCSQLGQDVKSLQEKLLSLEDENHVLRQKALTVSPKSNHRSLTKSFSERYSNAVPRTEQKPIFESPTPTELITPFTHGSLSDSRRSKLTAERHQDNNELLSRCIKEDLGFKNGKPLAACIIYKCLHHWHTFESERTAIFDYIVDGINDVLKVRDDDTVLPYWLSNTSALLCLLQRNLHSNGFLTATAQRYARSSGLTSRIGHKLRSPLKLIGYDDNTVHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLTLCIQAPKTGRMLGGKSSKSSGGLPPQSPVAQWDNMIRFLDSFISRMRVNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNANEEYAGTSWHELNYIRQAVGFLVIHQKIKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMRDLVSKDNHQSLTSNSFLLDDDMSIPFSAEDIDMAIPAINTDDIDPPAFLCEYPCAKFLTLQVK* 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00198 1094 SMART iq_5 331 353 IPR000048 GO:0005515
Phac9g00198 1094 SMART iq_5 308 330 IPR000048 GO:0005515
Phac9g00198 1094 SMART iq_5 356 378 IPR000048 GO:0005515
Phac9g00198 1094 SMART iq_5 404 426 IPR000048 GO:0005515
Phac9g00198 1094 SMART iq_5 379 401 IPR000048 GO:0005515
Phac9g00198 1094 SMART iq_5 427 449 IPR000048 GO:0005515
Phac9g00198 1094 CDD MyosinXI_CBD 687 1060 IPR037975 GO:0007015
Phac9g00198 1094 Pfam Myosin head (motor domain) 3 294 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac9g00198 1094 SMART DIL_2 911 1018 IPR002710 -
Phac9g00198 1094 FunFam unconventional myosin-Va 407 455 - -
Phac9g00198 1094 Coils Coil 591 625 - -
Phac9g00198 1094 ProSiteProfiles IQ motif profile. 428 457 IPR000048 GO:0005515
Phac9g00198 1094 Gene3D - 241 307 - -
Phac9g00198 1094 MobiDBLite consensus disorder prediction 627 646 - -
Phac9g00198 1094 MobiDBLite consensus disorder prediction 658 679 - -
Phac9g00198 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 455 IPR027417 -
Phac9g00198 1094 Pfam IQ calmodulin-binding motif 383 400 IPR000048 GO:0005515
Phac9g00198 1094 Pfam IQ calmodulin-binding motif 311 329 IPR000048 GO:0005515
Phac9g00198 1094 Pfam IQ calmodulin-binding motif 406 425 IPR000048 GO:0005515
Phac9g00198 1094 Pfam IQ calmodulin-binding motif 358 377 IPR000048 GO:0005515
Phac9g00198 1094 SMART MYSc_2a 1 307 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac9g00198 1094 Gene3D - 14 197 - -
Phac9g00198 1094 PANTHER MYOSIN 3 404 - -
Phac9g00198 1094 ProSiteProfiles Myosin motor domain profile. 1 306 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac9g00198 1094 ProSiteProfiles IQ motif profile. 309 338 IPR000048 GO:0005515
Phac9g00198 1094 Coils Coil 441 485 - -
Phac9g00198 1094 Coils Coil 525 545 - -
Phac9g00198 1094 ProSiteProfiles IQ motif profile. 332 361 IPR000048 GO:0005515
Phac9g00198 1094 Coils Coil 497 517 - -
Phac9g00198 1094 ProSiteProfiles Dilute domain profile. 736 1036 IPR002710 -
Phac9g00198 1094 Coils Coil 549 583 - -
Phac9g00198 1094 Gene3D Kinesin motor domain 3 240 IPR036961 -
Phac9g00198 1094 Gene3D - 308 358 - -
Phac9g00198 1094 Gene3D - 407 456 - -
Phac9g00198 1094 Gene3D - 359 406 - -
Phac9g00198 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 355 IPR027417 -
Phac9g00198 1094 PRINTS Myosin heavy chain signature 2 30 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac9g00198 1094 PRINTS Myosin heavy chain signature 55 83 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac9g00198 1094 MobiDBLite consensus disorder prediction 656 689 - -
Phac9g00198 1094 Pfam DIL domain 912 1015 IPR002710 -
Phac9g00198 1094 ProSiteProfiles IQ motif profile. 382 409 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00198 Phac-Chr9 1322294 1342398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00198 1 1090 Myosins gene family AT4G33200 69.872 0.0 1541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00198 K10357 - gmx:100796413 1947.55