Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00196 ATGGCATTTTGGTTTGGACTCCTTCTGCTTCTTCTCCTTTGTTTGGATTCGGTGAATTCTCACGACGGAGCAACGTTGTGGGAGATGAAGAAGTCGTTGAGGGATGTGGATAACGTTCTGTTTGACTGGACTGACACACCTTCTTCAGATTATTGTCTCTGGAGAGGGGTTACGTGTGATAATGTCACTTACAATGTGGTTGCACTGAATCTTTCAGGATTGAATCTTGAGGGCGAAATTTCACCTGCATTAGGAAGGCTTAGCAGCTTGGTCTCTATCGATCTCAAGGAAAACCGTTTATCTGGCCAGATACCTGATGAGCTTGGCGACTGTTCCTCTTTGAAAAACGTAGACTTGTCTTTTAATGAGATTCGGGGAGATATACCGTTTTCAATTTCAAAGATGAAACAACTGGAAAATCTAATCTTGAAAAATAATCAGCTGATTGGACCAATTCCTTCAACTCTCTCTCAGGTTCCTAACTTGAAGATTCTAGACCTCGCACAGAATAATCTCAGTGGGGAGATACCAAGACTTTTATACTGGAATGAAGTTTTGCAATATCTTGGCTTGCGAGGTAACAATTTGATGGGTTCACTTTCTCCAGACATATGCCAGTTAACTGGGCTGTGGTATTTTGACGTGAGAAACAATAGCTTGACAGGAAGTATTCCTGAAAACATAGGCAATTGTACTGCTTTCCAGGTCTTGGATTTATCCTACAACAAGCTATCTGGAGAGATACCATTCAATATTGGTTTCCTGCAAGTAGCAACTCTGTCATTGCAAGGCAATAAGCTCTCAGGTCGTATTCCATCTGTTATTGGTCTGATGCAAGCCCTTGCTGTCTTAGATTTGAGTTGTAACATGCTAAGTGGGCCAATCCCTCATATATTGGGAAATTTGACCTACACAGAAAAATTGTATTTGCATGGAAACAAGCTGACTGGTCTCATCCCCCCAGAGCTCGGAAATATGACAAAGCTTCACTATTTGGAATTGAATGATAACCATTTAAGTGGACATATCCCGCCTGAGCTTGGAAAGCTTACTGATCTGTTTGACTTAAATGTTGCCAATAACAACCTAGAGGGTCCAATTCCTAGTAAGCTCAGCTCATGTAAAAACCTGAACAGCCTCAATGTGCATGGGAATAAGCTGAGTGGAACAATTCCCTCATCTTTACAAAGCTTGGAGAGTATGACCTATCTGAATCTTTCTTCAAACAATCTTCAAGGGTCAATTCCAATTGAACTTTCACGGATCGGAAATTTGGATACACTGGATATATCAAAGAATAATATAGTTGGTTCCATTCCTTCTTCCATTGGTGATTTGGAACATCTTCTGAAGTTGAACCTGAGCAGAAATCATTTAACAGGCTTTATTCCGGCAGAATTTGGTAATCTGAGAAGTGTCATGGATATTGATCTTTCAAATAATCAACTCTCTGGCTTAATCCCTGAAGAACTTAGTCAGCTTCAGAACATGATATATTTGAGACTAGAAAAGAACAAATTATCTGGGGATGTGTCTTCGCTTGTAAATTGCCTTAGTCTTTCTTTGATTAATGTATCTTACAACAATTTAGTTGGTGTTATTCCCACAAGCAACAATTTTTCCAGGTTTTCCCCTGATAGTTTCATTGGAAACCCTGGTTTATGTGGCTATTGGCTAGATTCATCTTGTCGAGGGTATCACCCTACCGAGCGAGTTAACTTGTCTAAGGCAGCTATCCTAGGAATTGCTCTAGGTACCCTTGTGATTCTGTTCATGGTACTCTTTGCAGCTTGCAGACCACACAATCCAGCCCCTTTCCCTGACGGATCTTTCGACAAACCAGTTAATTACTCACCTCCCAAGCTAGTGATTCTCCACATGAATATGGCACTTCATGTATATGATGATATAATGAGGATGACTGAAAACCTAAGTGAGAAGTATATAATTGGGTATGGTGCATCAAGTACAGTTTACAAATGTGTTCTCAAGAATTGCAAGCCAGTGGCTATCAAGAAGCTATATTCCCACTACCCCCAATGCTTGAAAGAGTTTGAGACTGAGCTTGAGACAGTTGGCAGCATTAAGCACAGGAATCTGGTCAGTCTCCAAGGCTACTCTTTGTCTCCATTTGGAAACCTCCTCATTTATGATTACATGGAAAATGGCAGTCTGTGGGATCTTCTACATGGACCTTCCAAGAGGAAAAGGCTTGATTGGGATGTTCGTCTTAAAATAGCACTTGGATCAGCCCAAGGGCTAGCTTATCTACACCATGATTGCTGTCCACGTATCATTCACAGGGATGTGAAATCATCTAATATACTACTAGATAAAGACTTTGAGCCCCATCTCACCGATTTTGGCATTGCAAAGAGTCTATGCCCCTCTAAATCCCACACTTCAACTTACATAATGGGCACAATCGGCTACATAGACCCTGAGTATGCTAGAACTTCTCGACTCACTGAGAAGTCTGATGTGTATAGCTACGGTATTGTATTACTTGAGCTGCTAACTGGGAGGAAAGCTGTGGAAAACGAATCAAACCTTCATCATCTGATTTTGTCCAAGACAGCTAGTGATGCTGTAATGGAAACCGTTGATCCAGATATTAGTGCCACATGCAAGGAAATGATAGCAGTAAAAAAAGTTTTTCAGCTTGCTCTTTTGTGCACCAAGAAGCAACCAGTGGATAGACCCACAATGCACGAGGTGACGCGTGTGCTTGGAAGTCTAGTGCCACCAAAAGAATCAGTCCCAACAATGCAAGTACTCATACCTCCTTCACGGCCATCTGCTAAAACGCAATCCTACAAGGACGAATATGCCAATCTCAAAGCTCCACACTTGGTCAACTCTCCCTCCATCAGCACCTCTGATGCCCAACTCTTCCTCAAATTTGGAGAAGTAATATCTCAAAACAGCGTGTGA 2934 0.4155 MAFWFGLLLLLLLCLDSVNSHDGATLWEMKKSLRDVDNVLFDWTDTPSSDYCLWRGVTCDNVTYNVVALNLSGLNLEGEISPALGRLSSLVSIDLKENRLSGQIPDELGDCSSLKNVDLSFNEIRGDIPFSISKMKQLENLILKNNQLIGPIPSTLSQVPNLKILDLAQNNLSGEIPRLLYWNEVLQYLGLRGNNLMGSLSPDICQLTGLWYFDVRNNSLTGSIPENIGNCTAFQVLDLSYNKLSGEIPFNIGFLQVATLSLQGNKLSGRIPSVIGLMQALAVLDLSCNMLSGPIPHILGNLTYTEKLYLHGNKLTGLIPPELGNMTKLHYLELNDNHLSGHIPPELGKLTDLFDLNVANNNLEGPIPSKLSSCKNLNSLNVHGNKLSGTIPSSLQSLESMTYLNLSSNNLQGSIPIELSRIGNLDTLDISKNNIVGSIPSSIGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMDIDLSNNQLSGLIPEELSQLQNMIYLRLEKNKLSGDVSSLVNCLSLSLINVSYNNLVGVIPTSNNFSRFSPDSFIGNPGLCGYWLDSSCRGYHPTERVNLSKAAILGIALGTLVILFMVLFAACRPHNPAPFPDGSFDKPVNYSPPKLVILHMNMALHVYDDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKKLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSPFGNLLIYDYMENGSLWDLLHGPSKRKRLDWDVRLKIALGSAQGLAYLHHDCCPRIIHRDVKSSNILLDKDFEPHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVENESNLHHLILSKTASDAVMETVDPDISATCKEMIAVKKVFQLALLCTKKQPVDRPTMHEVTRVLGSLVPPKESVPTMQVLIPPSRPSAKTQSYKDEYANLKAPHLVNSPSISTSDAQLFLKFGEVISQNSV* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00196 977 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 184 293 - -
Phac9g00196 977 Gene3D Transferase(Phosphotransferase) domain 1 720 921 - -
Phac9g00196 977 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 294 566 - -
Phac9g00196 977 Gene3D Phosphorylase Kinase; domain 1 618 719 - -
Phac9g00196 977 SMART LRR_typ_2 470 493 IPR003591 -
Phac9g00196 977 SMART LRR_typ_2 159 183 IPR003591 -
Phac9g00196 977 SMART LRR_typ_2 398 422 IPR003591 -
Phac9g00196 977 SMART LRR_typ_2 326 350 IPR003591 -
Phac9g00196 977 SMART LRR_typ_2 207 231 IPR003591 -
Phac9g00196 977 SMART LRR_typ_2 87 111 IPR003591 -
Phac9g00196 977 SMART LRR_typ_2 446 469 IPR003591 -
Phac9g00196 977 SUPERFAMILY Protein kinase-like (PK-like) 621 910 IPR011009 -
Phac9g00196 977 Pfam Leucine rich repeat 424 483 IPR001611 GO:0005515
Phac9g00196 977 Pfam Leucine rich repeat 280 339 IPR001611 GO:0005515
Phac9g00196 977 SUPERFAMILY L domain-like 24 255 - -
Phac9g00196 977 Pfam Protein kinase domain 647 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00196 977 ProSiteProfiles Leucine-rich repeat profile. 161 183 IPR001611 GO:0005515
Phac9g00196 977 SUPERFAMILY RNI-like 200 534 - -
Phac9g00196 977 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 615 719 - -
Phac9g00196 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 765 777 IPR008271 GO:0004672|GO:0006468
Phac9g00196 977 PANTHER LEUCINE RICH REPEAT KINASE 2 373 915 - -
Phac9g00196 977 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 19 183 - -
Phac9g00196 977 Gene3D Ribonuclease Inhibitor 184 255 IPR032675 -
Phac9g00196 977 SMART serkin_6 644 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00196 977 Gene3D Ribonuclease Inhibitor 256 343 IPR032675 -
Phac9g00196 977 Gene3D Ribonuclease Inhibitor 439 565 IPR032675 -
Phac9g00196 977 Gene3D Ribonuclease Inhibitor 19 183 IPR032675 -
Phac9g00196 977 Gene3D Ribonuclease Inhibitor 344 438 IPR032675 -
Phac9g00196 977 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 720 920 - -
Phac9g00196 977 ProSitePatterns Protein kinases ATP-binding region signature. 650 673 IPR017441 GO:0005524
Phac9g00196 977 CDD STKc_IRAK 650 913 - -
Phac9g00196 977 Pfam Leucine rich repeat N-terminal domain 20 60 IPR013210 -
Phac9g00196 977 ProSiteProfiles Protein kinase domain profile. 644 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00196 Phac-Chr9 1308864 1316740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00196 89 977 Receptor kinase-like Gene Family AT5G07180 63.820 0.0 1130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Phac9g00196 Pkinase 5.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00196 K20718 - gmx:100804875 1735.7