Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00190 ATGGCTACTCGTTTCGTCAGAATTCCTCTCGCGTCGCAACCCAAGCTCTGCTTCAATTACACGCCCAATCATGCTGTCCAATTCATTTCTCCGACCAAAAGACGTCGCAACCGCAAAAGTAACCGCCACAGTCATGAGATTCTCCGTCCATCATTCGCAGTATCCAGTGCCCTCCGGACCGAGATTGGCTCACCGGAATCAGCTCTTGTCCGAGTCCAGAGAGAGAGAAAAGACTTGCTGGTTCTGCTTGACGTCTCCGGCATGATGTGCGGTGCGTGCGTCTCCCGAGTCAAAAATATCCTGTCCGCTGACGAACGAGTCGACTCGGTCGTCGTCAACATGCTCACCGAGACCGCCGCTGTTAATCTGCGCAGGGTCGAGGAGGAACCGGCCAGCGTCGCCGAGAGCCTCGCACGGAGACTGGGCGACTGCGGATTTCCGACGAAGCGGAGAGCGTCGAGTTCTGGAGTGACCGAAAACGTGAGGAAGTGGAAGGAATTGGTGAAAAAGAAGGAGGAATTGGTCGCTAAGAGTCGAAGCCGCGTCGCGTTCGCTTGGACATTGGTCGCATTGTGTTGTGGATCGCACGCTTCGCATATCTTTCACTCTTTGGGGATCCACATTGCTCATGGATCGCTTTGGGAGATTCTTCATAGTTCGTACGTGAAAGGTGGTTTAGCTTTGGGGGCTCTATTGGGTCCAGGACGAGAGTTACTCTTTGATGGCCTAAATGCATTTAAGAAGGGGTCGCCTAATATGAACTCTCTCGTGGGATTTGGTTCTATAGCTGCATTCATCATTAGTTCCATCCCGCTACTTAACCCCGGCCTTGCATGGGATGCATCATTCTTTGATGAACCGGTCATGCTTCTTGGGATCGTGCTTCTAGGACGTTCTCTTGAGGAAAAGGCAAGGATCCAGGCATCTAGCGATATGAATGAACTGCTTTCACTTGTATCTACTCAGTCAAGACTTGTGATTACTTCAACCGAAGGTTCACCTTCTACTGACACTGTGCTTTGCTCTGATGCAATTTGTGTTGAAGTCCCAACTGATGATATTCGAGTAGGTGATTCTGTGTTGGTGTTGCCTGGAGAGACTATTCCTATAGATGGAAAGGTTATTTCAGGAAGAAGTGTTGTAGATGAAGCCATGCTTACAGGGGAATCACTTCCTGTATTTAAGGAGAAAGGCCTCACAGTTTCAGCAGGAACTATAAATTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACTGGTTCCAACACTACAATATCGAAGATTGTACGCATGGTTGAGGAGGCTCAATCACGTGAAGCACCTGTACAAAGGCTTGCAGATTCAATAGCAGGGCCATTTGTATATAGTGTAATGACTCTGTCAGCAGCAACATTTGCATTTTGGTATTTTGTTGGATCACATATATTTCCTGATGTTTTGCTCAATGATATTGCGGGCCCAGAAGGAGATCCTTTGCTCTTGAGTTTAAAACTGTCCGTAGATGTTTTGGTTGTTTCTTGTCCTTGTGCATTGGGTCTTGCTACGCCCACAGCTATCCTGGTTGGAACCTCACTTGGAGCAAGAAAAGGACTTCTTATTAGGGGAGGGGATGTGCTAGAACGCTTGGCCAAAGTAAATTATATTGCTCTAGACAAGACAGGAACCCTGACGAAAGGAAAACCAGTTGTGTTGGCCATAGGCTCTATCCATTATGGAGAGTCTGAAATTCTTCGGATTGCTGCTGCAGTGGAGAAGACTGCATCTCACCCAATAGCAAAGGCTATTGTCAATAAAGCTGAGTCATTGGAGTTGATCCTTCCTGTCACGAAGAGACAGTTAGTTGAACCAGGTTTTGGTACTTTAGCAGAAGTAGATGGGCATTTGATTGCAGTTGGGTCTTTGGAATGGGTTCATCAACGCTTCCAAACAAGAGTGAATCCGTCTGATTTGAAAAATCTGGAACATAGTTTGATGAATCATTCGTCGAATACAACATCTTCTAAGTATTCGAAAACTGTTGTCTATGTTGGACGTGAAGGAGAAGGCATCATTGGTGCTATTGCCATATCTGACACTGTGCGTGAAGATGCTGAATCTACCGTAATGAGGCTCAAGCAGAAGGGGATTAAAACGGTCCTCTTGTCAGGAGATAGGGAAGAGGCAGTTGCAACAGTAGCAGATACAGTTGGAATTGAAAATGATTTCGTCAAAGCATCTTTGTCTCCGCAACAGAAGTCTAGTTTTATTTCCTCTCTAAAAGCTGCAGGACATCATATTGCGATGGTAGGTGATGGGATAAATGATGCACCCTCTTTGGCTGTAGCTGATGTTGGAATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCGGATGCAGCATCTATTATACTTCTAGGGAACAAAATTTCACAAGTTGTCGATGCGCTAGACCTAGCACAGGCAACAATGGCAAAAGTGTACCAGAATTTGTCTTGGGCGGTCGCCTATAATGCTGTTGCCATTCCCATTGCTGCTGGTGTGTTACTTCCCCAATTTGACTTTGCTATGACACCATCACTTTCAGGTGAGCTGCATTCTACCACTCCATTCTTCTCATATATCCTCCGGCTATTTAAGAAGTTATATTAA 2631 0.4622 MATRFVRIPLASQPKLCFNYTPNHAVQFISPTKRRRNRKSNRHSHEILRPSFAVSSALRTEIGSPESALVRVQRERKDLLVLLDVSGMMCGACVSRVKNILSADERVDSVVVNMLTETAAVNLRRVEEEPASVAESLARRLGDCGFPTKRRASSSGVTENVRKWKELVKKKEELVAKSRSRVAFAWTLVALCCGSHASHIFHSLGIHIAHGSLWEILHSSYVKGGLALGALLGPGRELLFDGLNAFKKGSPNMNSLVGFGSIAAFIISSIPLLNPGLAWDASFFDEPVMLLGIVLLGRSLEEKARIQASSDMNELLSLVSTQSRLVITSTEGSPSTDTVLCSDAICVEVPTDDIRVGDSVLVLPGETIPIDGKVISGRSVVDEAMLTGESLPVFKEKGLTVSAGTINWDGPLRIEASSTGSNTTISKIVRMVEEAQSREAPVQRLADSIAGPFVYSVMTLSAATFAFWYFVGSHIFPDVLLNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLAKVNYIALDKTGTLTKGKPVVLAIGSIHYGESEILRIAAAVEKTASHPIAKAIVNKAESLELILPVTKRQLVEPGFGTLAEVDGHLIAVGSLEWVHQRFQTRVNPSDLKNLEHSLMNHSSNTTSSKYSKTVVYVGREGEGIIGAIAISDTVREDAESTVMRLKQKGIKTVLLSGDREEAVATVADTVGIENDFVKASLSPQQKSSFISSLKAAGHHIAMVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILLGNKISQVVDALDLAQATMAKVYQNLSWAVAYNAVAIPIAAGVLLPQFDFAMTPSLSGELHSTTPFFSYILRLFKKLY* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00190 876 Pfam E1-E2 ATPase 335 529 - -
Phac9g00190 876 NCBIfam heavy metal translocating P-type ATPase 253 845 IPR027256 GO:0006812|GO:0016020|GO:0019829
Phac9g00190 876 Gene3D - 560 693 IPR023299 GO:0000166
Phac9g00190 876 SUPERFAMILY HMA, heavy metal-associated domain 81 128 IPR036163 GO:0046872
Phac9g00190 876 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 551 644 IPR023299 GO:0000166
Phac9g00190 876 PANTHER ATP7, ISOFORM B 77 858 - -
Phac9g00190 876 CDD HMA 83 147 IPR006121 GO:0046872
Phac9g00190 876 FunFam Copper-transporting ATPase 1, putative 305 436 - -
Phac9g00190 876 Pfam haloacid dehalogenase-like hydrolase 545 776 - -
Phac9g00190 876 PRINTS P-type cation-transporting ATPase superfamily signature 549 563 - -
Phac9g00190 876 PRINTS P-type cation-transporting ATPase superfamily signature 382 396 - -
Phac9g00190 876 PRINTS P-type cation-transporting ATPase superfamily signature 685 696 - -
Phac9g00190 876 PRINTS P-type cation-transporting ATPase superfamily signature 707 717 - -
Phac9g00190 876 PRINTS P-type cation-transporting ATPase superfamily signature 762 781 - -
Phac9g00190 876 SUPERFAMILY Calcium ATPase, transmembrane domain M 283 543 IPR023298 -
Phac9g00190 876 SUPERFAMILY HAD-like 547 847 IPR036412 -
Phac9g00190 876 SFLD C1.7: P-type atpase like 532 815 - -
Phac9g00190 876 NCBIfam HAD-IC family P-type ATPase 335 854 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g00190 876 Gene3D - 540 813 IPR023214 -
Phac9g00190 876 Pfam Heavy-metal-associated domain 83 146 IPR006121 GO:0046872
Phac9g00190 876 Gene3D - 305 436 - -
Phac9g00190 876 Gene3D - 81 151 - -
Phac9g00190 876 SUPERFAMILY Calcium ATPase, transduction domain A 342 432 IPR008250 -
Phac9g00190 876 SFLD p-type atpase 532 815 IPR044492 -
Phac9g00190 876 CDD P-type_ATPase_HM 181 844 - -
Phac9g00190 876 FunFam Copper-transporting ATPase PAA2, chloroplastic 560 693 - -
Phac9g00190 876 ProSitePatterns E1-E2 ATPases phosphorylation site. 551 557 IPR018303 -
Phac9g00190 876 ProSiteProfiles Heavy-metal-associated domain profile. 79 149 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00190 Phac-Chr9 1281197 1295333 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00190 244 856 Primary Pumps ATPases AT1G63440 36.538 1.15e-109 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00190 K17686 - gmx:100127402 1444.1