Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00181 ATGGATGCCAATTATGAGAAGCAAGGTCTGCAAGGCGGCGAAGTGAGCATGGCTGAGAAGAAAAGGGAAGTGATGGTGGCGATTCCAAATGAGGGTGGTGGTGAATCTTTGATGGCGCACAGAATGTTAAACGACAACGAGGTTGCTGCAAAGTCGCCACCTTTGAACTGTGCTTCCCCTGAGATAAGGTTCATGCCAAGCCCAAACAAGCCCCCAAAGGTTCCCACTTCCAACGCCAATCTCACCCGGAGAAAATCACTCACAAGGTCAGTGTATTCCAAACCCAAATCAAGGTTTGGTGAACAACCTTACCCTGTTGATGGTACCCTTTTGGAAGAGAATGGTACCTCAACTTTGCAAGAAAATTTGAGTGTTGGTTCACCATATAAAGCATCGCCTGTTAACAATAAACCTGGAACTGTTAATAGAACAGTCTCCATCCTTTCTGTGATCACTCCCAAGACGCCGTTGATGGCGTCTCCCGGGCCGGCTGGCGGGGAGGATTTCGATGAAATCATTTACAGAAAAGTTGAATTGAGTAAAAGCAAACGCAGTAGGAGAGTGACAGCTAAGGTTTTGTTTGAATGGTTTGTTTTTGTGTGCATTACAAGTAGCTTGGTGGCTAGTTTAACAGTTGGAAAACTTAGAAGGACTGAGATTTGGGGTTTGGGGATTTGGAGGTGGTGTGTGCTTGTGTTGGCGACCTTTTGTGGCATGTTGGTTACCAGATGGTTCATGCGCATTATTGTTTTCTTGATTGAGACCAACTTTTTGTTGAGGAAAAAGGTGCTGTATTTTGTCCATGGACTGAAGAAGTGTGTCCAGTTCTTCATTTGGCTTGGTTTGGTTCTTCTTACATGGGTTCTGTTGATTAACCGGGGAGTGCACCGATCTGAATTGGCCACAAAGATTTTGAATGGGGTAACATGGACTCTTGTTTCCCTCCTCATTGGAGCATTCCTGTGGTTCGTGAAGACATTGTTGCTGAAGATTTTGGCATCAAATTTTCATGTTAAATCTTTCTTTGATCGAATTCAAGAATCGCTATTCCATCAGTACATTCTGCAGACTCTTTCTGGGCCTCCACTTGTAGAAGAGGCTGAGAAGGTTGGGGCATCCCTCAGTGTTGGTCACTTTAGTTTCAGGAGTACTGATGGTAAGGGTGGAATGAAGAAAGAGACTATTGATATTGCGAAGCTTCACCAGATGAAACAAGAGAAGGTTTCTGCGTGGACTATGAAGGTCTTGGTAGATGCAATGACAAATTCAGGGCTGTCCACAATCTCTGGTGCACTAGATGAGAGTTTTTATGATGGAGAAAATGAACAGACTGATAAAGAGATTACTAATGAGATGGAAGCAATTGCTGCAGCCTATTACATTTTCAGGAATGTTGCTGCTCCTGGTTGCACGTACATTGATGAGGATGAACTACGGAGGTTCATGATTAAGGAAGAAGTGCGGATGGTATATCCCTTACTGGCTGAAGCAGAAACGGGACAGATTACCAGGAAGTCCTTAACAGACTGGTTGTTGAAGGTATATCAGGAACGCAAATCATTGGCACATGCCTTAAGCGACACCAAAACTGCTGTGATACAGCTAAACAAGCTTGTGACAGGAATCCTAATAGTGGTAAACATAATTGTGTGGCTTCTACTAATGGAGATTGCAACAACAAAAGTACTTGTATTTCTCTCTTCCCAGCTAGTACTTGCAGCTTTCATGTTTGGAAACACTTGTAAGAACATATTTGAAGCTATCATCTTCGTGTTTGTGATGCATCCATTCGATGTTGGTGATCGATGTGTTATTGATGGGGTTGAGCTATTGGTTGAAGAAATGAATATACTGACCACAGTCTTCTTGAAGCTTAACAATGAAAAAGTGTACTATCCAAATTCTGTATTGGCCATGAAACCGATTAGCAATTATTACAGAAGCCCAGATATGGGTGACCGTGTAGAGTTCTCAATTGATTTTACAACACCAGCTGAGAAAATTGGGGCACTGAGAGAAAAAGTAAAGTGGTACCTGGAGAGAAATCCCCAATACTGGCACCCTAATCATAGCTTAGTAGTGAAGGACATTGAAGACGTAAACAAGATTAAGATGGGTATATACGTTACCCACACAATGAACTTTCAAGAGTTTGGGGAGAAAAACAGGAGAAGAACTGAACTGGTGATGGAAATAAAGAAAATATTTGAAGAACTCAACATCAGATACAACCTTCTTCCACAAGGCATTCATCTCAAACGTATGGAGCCAGACCCTAGGGTGCTCAATACATGA 2295 0.4261 MDANYEKQGLQGGEVSMAEKKREVMVAIPNEGGGESLMAHRMLNDNEVAAKSPPLNCASPEIRFMPSPNKPPKVPTSNANLTRRKSLTRSVYSKPKSRFGEQPYPVDGTLLEENGTSTLQENLSVGSPYKASPVNNKPGTVNRTVSILSVITPKTPLMASPGPAGGEDFDEIIYRKVELSKSKRSRRVTAKVLFEWFVFVCITSSLVASLTVGKLRRTEIWGLGIWRWCVLVLATFCGMLVTRWFMRIIVFLIETNFLLRKKVLYFVHGLKKCVQFFIWLGLVLLTWVLLINRGVHRSELATKILNGVTWTLVSLLIGAFLWFVKTLLLKILASNFHVKSFFDRIQESLFHQYILQTLSGPPLVEEAEKVGASLSVGHFSFRSTDGKGGMKKETIDIAKLHQMKQEKVSAWTMKVLVDAMTNSGLSTISGALDESFYDGENEQTDKEITNEMEAIAAAYYIFRNVAAPGCTYIDEDELRRFMIKEEVRMVYPLLAEAETGQITRKSLTDWLLKVYQERKSLAHALSDTKTAVIQLNKLVTGILIVVNIIVWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVIDGVELLVEEMNILTTVFLKLNNEKVYYPNSVLAMKPISNYYRSPDMGDRVEFSIDFTTPAEKIGALREKVKWYLERNPQYWHPNHSLVVKDIEDVNKIKMGIYVTHTMNFQEFGEKNRRRTELVMEIKKIFEELNIRYNLLPQGIHLKRMEPDPRVLNT* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00181 764 Gene3D - 596 645 IPR023408 -
Phac9g00181 764 Pfam Mechanosensitive ion channel 537 742 IPR006685 GO:0016020|GO:0055085
Phac9g00181 764 FunFam Predicted mechanosensitive ion channel 596 645 - -
Phac9g00181 764 SUPERFAMILY Sm-like ribonucleoproteins 586 645 IPR010920 -
Phac9g00181 764 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 75 758 IPR016688 -
Phac9g00181 764 PIRSF Memb_At2g17000 27 763 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00181 Phac-Chr9 1201755 1208049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00181 50 754 Mechanosensitive Ion Channel Family AT5G12080 59.520 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00181 K22048 - gmx:100803107 1340.1