Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00173 ATGGATAACAATTGGAATAACTCCTCCGACTCATTTGACAACAGTCCACTTATCAGTAACTATATCGAACCAGACCCTGCACTTGTCTATATATTCAATGACCAACCCAATGCACTGCCCCAGCAACGAAATGCACAACAAAATGATCCTTTTGTGGTTGAACAGGATCATGTTTCCTTCACTGGTTTAACCATTGAAGATGTATCCACTCATAGCGATAATGATCTCACCATAGGAGGAGTTTCTAAATTGGATCAGGGGGGTTGGTCGATGAGGAAGCGTAAATTTCCCTTCATGGATTCAATGATTGAAGATCATCCCATGCATGACAAAGATAATTTTCCCAACGGAGAAAATATGAGTGCACATATAAATCTAAACGAACTTCGATTTTGGCCTCCCGCACCATTTGATGTTGATATTGACACTTCCTTTGACCCATTTCTTCATAACTTGATCGACCGGGACATCTCAATTTTCGATCTATCCAATGATGAACTCATTTCACCCTCCTTGCAACAAAATGCATTGCCCCAACACCAACACCAAGTGCCACAAAATGCACTTTCCAAACAACAAAATGTGCTGCCCCAACTCCTGCACACACTGCCCCAAAGCCAAAATGTTTATCAATTTGGCGTTGAACAGATTCATGTTCCCATCCTGAATCCAACGTTCCAAGATCAATCCTTGCATGTGAATTATAATTTTACCACTGGAGGAGAAGTTCCTAACATTGACGTGGGTAAACAATCCATGGCTGAACATCCACTGTTAAGGCATGGTATACTGAACGAGGAAGATGTGATCGCAATTGATCATTGGCCCCCGTCATCAAAGTTACTATCTTGCTCTTGCTGTCAAATTCTCAGACAAATAATTCACACAGATGGTTTTAAGTTTGAAAAGTTAGAGATTCATGGATCGCTCGGGGTGATTGGCCACGCAATATTCCACATTCAGGATATGACACCGGGGGTTGAACCTCCAAGAGAAATTTATCAAATGATAGATTTGAGCCGCAAAAGCATAGAACAAATAAGGAGTTTCCTGGTAGCGTACTGCAAGGATCAGACAAGATTAGGGCTCGTTACTCTTGATGATCCGTTGTCTGCGTATTATGATACCATCTGCACTGGACTTGACTGGGCTGAACATTATAATGACGGAGACGATGACTTGAGTCCACCTAATAGCACAGAGCCCGAGTCTGACTCTGAGCCCGAGCCCGAGCCCGAGCCCGAGCCTGAGCCTGAGCCTGAGACTATTCCTGAGTCTGATCCTGTTCCTGAGCCTCATAATGAAGAGGCTTCAACTACTAAGCCTAAGCCTAAACGTAATATGGCAGTTCAGAGGAAGAGAGTACCAAAGATGACAATGAATGATTTGAGCCCTTTCTTCCATTTAACTATTAGGGATGCAGCGGATAAACTGGATGTAAGCGACTCTGTGGTGAAGAAAATCAGCCGCTTGGGAAACTTAAAAAGGTGGCCCCAAAGAAAGCTGCAAAGCCTTGCGAAGGATGTGAGAGTTCTCAGAAAAGCATTGAATTCACCCTATGAAGAGACAAGCAAGAGAGTTCGACAAGAAATTCAAAGACTCCAGCGAGAAATGGTTGCAATTTGTGGTGGAGTTGTCCCAACCGGAATAGAAATGCTCCAATTGGAAGAAGAATAG 1677 0.4323 MDNNWNNSSDSFDNSPLISNYIEPDPALVYIFNDQPNALPQQRNAQQNDPFVVEQDHVSFTGLTIEDVSTHSDNDLTIGGVSKLDQGGWSMRKRKFPFMDSMIEDHPMHDKDNFPNGENMSAHINLNELRFWPPAPFDVDIDTSFDPFLHNLIDRDISIFDLSNDELISPSLQQNALPQHQHQVPQNALSKQQNVLPQLLHTLPQSQNVYQFGVEQIHVPILNPTFQDQSLHVNYNFTTGGEVPNIDVGKQSMAEHPLLRHGILNEEDVIAIDHWPPSSKLLSCSCCQILRQIIHTDGFKFEKLEIHGSLGVIGHAIFHIQDMTPGVEPPREIYQMIDLSRKSIEQIRSFLVAYCKDQTRLGLVTLDDPLSAYYDTICTGLDWAEHYNDGDDDLSPPNSTEPESDSEPEPEPEPEPEPEPETIPESDPVPEPHNEEASTTKPKPKRNMAVQRKRVPKMTMNDLSPFFHLTIRDAADKLDVSDSVVKKISRLGNLKRWPQRKLQSLAKDVRVLRKALNSPYEETSKRVRQEIQRLQREMVAICGGVVPTGIEMLQLEEE* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00173 558 Coils Coil 550 558 - -
Phac9g00173 558 ProSiteProfiles RWP-RK domain profile. 445 525 IPR003035 -
Phac9g00173 558 Pfam RWP-RK domain 457 505 IPR003035 -
Phac9g00173 558 Coils Coil 517 537 - -
Phac9g00173 558 MobiDBLite consensus disorder prediction 426 442 - -
Phac9g00173 558 MobiDBLite consensus disorder prediction 388 457 - -
Phac9g00173 558 PANTHER PROTEIN RKD4 274 542 IPR044607 GO:0003700
Phac9g00173 558 MobiDBLite consensus disorder prediction 404 424 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00173 361 505 AtRKD Transcription Factor Family AT4G35590 28.000 8.79e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Phac9g00173 RWP-RK 3.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00173 - - pvu:PHAVU_009G080800g 1019.22