Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00169 ATGAGTTTGGGGACCGCGGAGGACGATCCGGGTTCTGAAATCCACATCCCGGCGGAGATTGACTGGCACATGTTGGATAAGTCCAAGTTTTTCTACCTGGGCGCCGCCTTATTCTCCGGCGTTTCCTTCACGCTCTACCCCATGGTCGTGTTGAAGACGCGCCAGCAGGTTTCCTCCTCGCGCTTCTCCTGCCTCAACATGTCCTGCGCCATAATGCGCTACGAGGGTCTCAGAGGCTTCTACAAAGGCTTCGGCACTTCCCTCATGGGAACCGTCCCCGCGCGGGCGCTCTACATGGCCTCGCTTGAAGTCACAAAAAGTAACGTCGGGACTGCCTTTCTCGAATTGGGGTTCTCCGAGACGACGGCTGTGGCGGTGGCTAATGCCGCCGCGGGTGTTACTTCCGCCATGGCGGCGCAGCTGGTGTGGACTCCCGTGGATGTCGTCAGTCAACGGCTCATGGTTCAGGGGAGCGGAGGGAGTAAAAACATTCTGGCTAATCATAATTACGAGAGTTACAGAAACGGGTTTGATGCCTTTAGGAAGATTCTGTGTGCTGATGGAGCAAGAGGGTTCTACAGAGGGTTTGGGATTTCGATATTGACATATGCTCCTTCCAATGCGGTTTGGTGGACTTCTTATTCCATGGTTCACAGACTCATTTGGGGTGCTTTTGGTTCCTACATGAGTAAGGGTAAAACCGAAAGCAGTGATAATTTGAGTGGTTTTAGGCCTAATTCAAAGACAGTAGTGGCGGTTCAAGGGTTAAGTGCGGTTATGGCTAGTGGGGTATCTGCAATTGTGACAATGCCTCTTGATACCATTAAGACAAGGTTGCAGGTGTTGGACAGTGAAGAGCATGGGAGAAGGAGGCCTTTAACTTTTGTTCAGACGGTGAGGAATTTGGTGAAGGAAGGTGGATTGCCTGCTTGTTACAGAGGATTGGGACCAAGATGGGCTTCCATGTCATTGTCTGCTACAACTATGATTACTACTTACGAGTTCTTGAAAAGAATGTCTACCAAGAGTCAATAG 1035 0.5082 MSLGTAEDDPGSEIHIPAEIDWHMLDKSKFFYLGAALFSGVSFTLYPMVVLKTRQQVSSSRFSCLNMSCAIMRYEGLRGFYKGFGTSLMGTVPARALYMASLEVTKSNVGTAFLELGFSETTAVAVANAAAGVTSAMAAQLVWTPVDVVSQRLMVQGSGGSKNILANHNYESYRNGFDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGSYMSKGKTESSDNLSGFRPNSKTVVAVQGLSAVMASGVSAIVTMPLDTIKTRLQVLDSEEHGRRRPLTFVQTVRNLVKEGGLPACYRGLGPRWASMSLSATTMITTYEFLKRMSTKSQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00169 344 Gene3D Mitochondrial carrier domain 164 344 IPR023395 -
Phac9g00169 344 Gene3D Mitochondrial carrier domain 23 163 IPR023395 -
Phac9g00169 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 220 IPR018108 -
Phac9g00169 344 SUPERFAMILY Mitochondrial carrier 24 336 IPR023395 -
Phac9g00169 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 339 IPR018108 -
Phac9g00169 344 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Phac9g00169 344 Pfam Mitochondrial carrier protein 252 343 IPR018108 -
Phac9g00169 344 Pfam Mitochondrial carrier protein 40 108 IPR018108 -
Phac9g00169 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 108 IPR018108 -
Phac9g00169 344 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Phac9g00169 344 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Phac9g00169 344 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 12 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00169 Phac-Chr9 1139627 1140661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00169 1 344 Chloroplast and Mitochondria Gene Families AT1G72820 65.994 3.19e-163 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00169 K15121 - gmx:100784202 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00169 9 1139627 1140661 Phac9g00169 9 1139627 1140661 ECH