Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00163 ATGAGTGATAATAATCCAAAACCACCGGATTCACCTGAGAGTGATTTCAGCAAGCAATGGCCTTCGGAGCTCTATGAGTACCTGAATTTAGATGATGATCAATTGCCATGTGATGAGCTCGATTCATTTGTTTCAGGGCATGTTCTCAGCCATAACACTGAAGCCAATGAAGGAAGTAGCAGCCACCATGAAGAGTTTTCTATCAATGAGAAGAAAGAAGTGAGAGATAGAGTTGCGTTCAAAACAAAGTCAGAGATAGAAATAATGGATGACGGGTTCAAGTGGAGGAAGTACGGAAAGAAGAAGGTGAAAAACAGCCCCAATCCAAGGAACTACTACAAGTGTTCAGTAGACGGATGTTCAGTAAAAAAGACAGTTGAAAGGGACAAGGATGATCCGAGATATCAGAGTTAG 414 0.4155 MSDNNPKPPDSPESDFSKQWPSELYEYLNLDDDQLPCDELDSFVSGHVLSHNTEANEGSSSHHEEFSINEKKEVRDRVAFKTKSEIEIMDDGFKWRKYGKKKVKNSPNPRNYYKCSVDGCSVKKTVERDKDDPRYQS* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00163 137 ProSiteProfiles WRKY domain profile. 84 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g00163 137 Pfam WRKY DNA -binding domain 90 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g00163 137 Gene3D WRKY domain 76 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g00163 137 SUPERFAMILY WRKY DNA-binding domain 82 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g00163 137 MobiDBLite consensus disorder prediction 51 70 - -
Phac9g00163 137 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 135 IPR044810 GO:0003700
Phac9g00163 137 SMART WRKY_cls 89 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00163 Phac-Chr9 1118854 1119744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00163 77 135 WRKY Transcription Factor Family AT5G26170 81.356 1.19e-32 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac9g00163 WRKY 4e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00163 - - gmx:100819462 219.55