LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac9g00149	ATGTCTCTTCAACACCCAGGTGCCGCCCCACCGCAGAACGTCACAATGGTGGCTGTTGACAAAGACAAGAACAGTGCCCACGCTTTCCGTTGGGCCGTTAATCATCTTGACAACCCCGTCATCATTGCCGTCCATGTCAAGCACAAAAACTTTTCTCATCATGTCACCAATGTGTTTCCACCAGACGAAGAGGATGTAGTCAATATTTTCAATTCCTTACGTGGAATGTGCAACCGCAAAGCTGTCACGATGAAAGAAGCCGTAGTCGATGATGCCGATGTTGTGAGAGGACTTCTAGAGTTTGCAAACAGGAATCTCATACATAGCATCGTGGTCGGTGCATCCGCCAAAAACCCTTTGTCAAGTCTCAAAAAATTTAAAGCCTATCAGTATCAGGATATACCAACAACCATGATCAAATCAGCTCCAGATTACTGCTCTGTGTACATAATTTCGAAATTGAAGCTTGTGTCTGCTCGATCAGCGGCACGGTCATTGTCAAAAGGTTTGACCACATCGAAACAAGTTCCTGTGCCGGCAAGTCCACCTAGTGAACCAGAAGGTGGATCGTTAAGGGGACAACCACCTAGAAGTAGGAGTCCTTACGAAGGAGCAGCAGAACCAATGCGAATAACACCGGCAAGAGAAAGACCGAAGAGTGCGGGCAGTAGTATGTCAATAGAGAACATTGATATACCCACTCGTCCACGACATTGGTCAATGGATGACAGGGAAATTTCAGGGCTTGGGGCAGTGGATTTATCAAGACTTGATTCTGGTATATCAGATTCCATCGGGATGTCATCATCTCCTCAACCCTCAAAAGAACTTGAAGCCGAGATGAAAAGATTGAGGCTTGAACTGAAGCAAACTATGGACATGTACAACTCAGCTTGCAAGCAAGCAATCTCTGCCAAAAACCAGGCGGAACAGATTCGTCAATGGAAACTGGAAGAGGATCGCAAGGTTGAGGAAGTTAGATTGTCTCAAGAGGCAGCTCTTGCAATTGCAGAAAAGGAGAAGGCTAGAGCAAAAGCTGCAATGGAAGCAGCTGAGGAGGCTAGGAGGAGGGCTGAACAGGAAGCACAGAGAAGAAAAAATGCAGAGATGAAGGCCAGGGCGGAGGCAGAAGAGAAAGAACGAGCATTATCTACGTTGGCTCAAAACGATATCCGGTATAGAAGATACACCATAGAGGAGATTGAAATAGCCACAGGAAAGTTCTCTTCGTCAAACAAAATTGGTGAAGGTGGATATGGACCTGTGTATAAAGGCCACCTTGATCACACCCCGGTCGCAATCAAAATTTTAAGGCCTGATGCCTCTCAGGGCATGAAGCAGTTCAACCAAGAGATTGAGGTACTGAGCTGCATTAGACATCCGCATATGGTCCTCCTGCTTGGTGCATGTCCTGATCATGGATGCTTAGTGTATGAATACCTGGATAATGGTAACTTAGAAGACAGATTGCTCCGGAAAAATAACAGCAGACCAATTTCATGGAAGAAACGGTTCGAAATATCTGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAAACAAACCAGAACCTATCGTGCACCGAGACCTCAAACCATCCAACATTCTCGTGGACAGAAATTACGTGAGTAAAATCGGTGATGTTGGTCTTGCACGTTTAGTCCCTCCTTCTGTAGCTGATACAATGACTCAGTATCACATGACTTCGGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTATCAACAAACGGGAATGCTAACACCAAAGTCAGATATATATTCTCTGGGGATAATGCTACTTCAGATAATCACAGCCAAGCCTCCCATGGGCCTTGCTCACCAAGTTAGGAAGGCAGTTGAAAAGGGCAGGCTTGAAGAAGTGCTCGACCCTGTGATCACAGATTGGCCAATGGAAGAGGCTCTATCATATGCCAAACTAGCATTGAAGTGTGTCCAACTCAGCAAGAAGGACAGACCAAATCTTGCAACGGAGTTGTTGCCTGAGCTTACCAGGTTAAGCAATCTTGAATTGCCTCCACAGAATGATCGATTTTCTTACAGTAGTGCTGATACGATCTATAGCTGTAATTCACATCCTCCCACACCTCCGCGAAGTCAATACTCTGATTCAGAGACGTCCTACAGGATCTAG	2157	0.4571	MSLQHPGAAPPQNVTMVAVDKDKNSAHAFRWAVNHLDNPVIIAVHVKHKNFSHHVTNVFPPDEEDVVNIFNSLRGMCNRKAVTMKEAVVDDADVVRGLLEFANRNLIHSIVVGASAKNPLSSLKKFKAYQYQDIPTTMIKSAPDYCSVYIISKLKLVSARSAARSLSKGLTTSKQVPVPASPPSEPEGGSLRGQPPRSRSPYEGAAEPMRITPARERPKSAGSSMSIENIDIPTRPRHWSMDDREISGLGAVDLSRLDSGISDSIGMSSSPQPSKELEAEMKRLRLELKQTMDMYNSACKQAISAKNQAEQIRQWKLEEDRKVEEVRLSQEAALAIAEKEKARAKAAMEAAEEARRRAEQEAQRRKNAEMKARAEAEEKERALSTLAQNDIRYRRYTIEEIEIATGKFSSSNKIGEGGYGPVYKGHLDHTPVAIKILRPDASQGMKQFNQEIEVLSCIRHPHMVLLLGACPDHGCLVYEYLDNGNLEDRLLRKNNSRPISWKKRFEISAEIATALLFLHQNKPEPIVHRDLKPSNILVDRNYVSKIGDVGLARLVPPSVADTMTQYHMTSAAGTFCYIDPEYQQTGMLTPKSDIYSLGIMLLQIITAKPPMGLAHQVRKAVEKGRLEEVLDPVITDWPMEEALSYAKLALKCVQLSKKDRPNLATELLPELTRLSNLELPPQNDRFSYSSADTIYSCNSHPPTPPRSQYSDSETSYRI*	719

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac9g00149	718	Gene3D	Phosphorylase Kinase; domain 1	376	480	-	-
	Phac9g00149	718	Pfam	Universal stress protein family	16	122	IPR006016	-
	Phac9g00149	718	MobiDBLite	consensus disorder prediction	696	718	-	-
	Phac9g00149	718	Gene3D	Transferase(Phosphotransferase) domain 1	481	688	-	-
	Phac9g00149	718	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	381	480	-	-
	Phac9g00149	718	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	526	538	IPR008271	GO:0004672\|GO:0006468
	Phac9g00149	718	Pfam	Protein kinase domain	409	664	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac9g00149	718	Coils	Coil	274	294	-	-
	Phac9g00149	718	CDD	STK_N	14	153	-	-
	Phac9g00149	718	SMART	serkin_6	408	672	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac9g00149	718	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	16	122	-	-
	Phac9g00149	718	PANTHER	OS02G0152300 PROTEIN	15	689	-	-
	Phac9g00149	718	ProSiteProfiles	Protein kinase domain profile.	408	671	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac9g00149	718	MobiDBLite	consensus disorder prediction	168	226	-	-
	Phac9g00149	718	Gene3D	HUPs	15	130	IPR014729	-
	Phac9g00149	718	SUPERFAMILY	Protein kinase-like (PK-like)	389	664	IPR011009	-
	Phac9g00149	718	Coils	Coil	334	389	-	-
	Phac9g00149	718	MobiDBLite	consensus disorder prediction	355	377	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac9g00149	Phac-Chr9	1057523	1061731	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac9g00149	84	677	Receptor kinase-like Gene Family	AT5G12000	55.502	0.0	678

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Phac9g00149		Pkinase	2e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac9g00149	-		-	gmx:100798861	1068.53