Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00135 ATGGGTGCCTCAGGAAAATGGGTAAAGGCTTTAATCGGACTCAAGAAACCAGACAAAGACGAACATGTGAAAGAGGGTGGTGGTAAGAGCAAGAAGTGGAGGCTATGGAGGAGTTCTTCTGGGGATATGGGTTCTTGGAAGGGTTTCAAAGGAAACCACCACAAAGAGGCTTCTGAAGGGTCTGATTCTCCACCTGTTTTAGCAGCAGATGCTTACACAGCTGCAGTAGCCACTGTGGTTCGAGCACCACCTAAGGATTTCAGACTCGTCAAGCAAGAATGGGCCGCTATAAGAATCCAAACTGCTTTCCGTGGCTTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAGGGAGTGGTGAGGATTCAAGCTCTTGTGCGGGGTAGACAGGTGAGGAAACAAGCTGCGGTGACACTGAGGTGTATGCAGGCCTTGGTTCGGGTTCAGGCCCGTGTAAGAGCTCGTCGTGTGAGGATGTCCATGGAGGGGCAAGCTGTGCAGAACATGCTTAATGAAAGGCGCAGTAAGCTTGAACTTTTGAAGCAAGCTGAGGAAGGATGGTGTGACAGCAGAGGGACGCTGGAAGATGTGAAAGTAAAGATACAGATGAGGCAAGAAGGAGCTTTCAAAAGGGAAAGAGCAATTGCTTACTCTCTTGCTCAAAAGCAATGCAGATCAACCCAAAGTTACAATTCACGAGCTACTAATGGCTCTTTTTGCTCCCTGAAGAGTCATGAGAGTAACAAAGCTAACTGGGGGTGGACTTGGCTGGAGCGTTGGATGGCAGCCAAGCCTTGGGAGAGTAGATTGATGGAACAATCTCAGGCTGAAGCCTTGTTAGATAAAACCCCACTTCCAAAGAAGTTTGAGGAACCCTTTGTGAACTCTAATTCCAAACCATGTTTGGTCAAGGTCAAGAAGAACAACATGACAACAAGGGTTTCGGCTAGGCCTCCCCTTGTTGGGCAAGCTACTCGTTCATCCTCAAGTCCAAGTTCTGAGTTTCGATATGATGAGAGCTCTGCATCATCTTCTATTTGTACATCTACAACACCGATATCTGGGAACACTTGTGACAGGACTGATGATAGTAACGGTAATGCTGTTGCTAGGCCTAATTACATGAACCTGACTCAGTCCACAAAGGCAAAGCTAAAGACAAGTAGTAATCATGTGTATAATAGAGCTCAAAGGCAACAGTCCATGGATGAGTTTCAATTTCTCAAGAGGGCAGCGGTTTTCTCCAATGGAGATTCCAAAAGCACTGCCGGTTCTGACCCTTCAATCAACCTTTCTAGGCCACTTCACTTGGACAAGGGCTCAGTGAGGCCACGGTGA 1335 0.4749 MGASGKWVKALIGLKKPDKDEHVKEGGGKSKKWRLWRSSSGDMGSWKGFKGNHHKEASEGSDSPPVLAADAYTAAVATVVRAPPKDFRLVKQEWAAIRIQTAFRGFLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRSKLELLKQAEEGWCDSRGTLEDVKVKIQMRQEGAFKRERAIAYSLAQKQCRSTQSYNSRATNGSFCSLKSHESNKANWGWTWLERWMAAKPWESRLMEQSQAEALLDKTPLPKKFEEPFVNSNSKPCLVKVKKNNMTTRVSARPPLVGQATRSSSSPSSEFRYDESSASSSICTSTTPISGNTCDRTDDSNGNAVARPNYMNLTQSTKAKLKTSSNHVYNRAQRQQSMDEFQFLKRAAVFSNGDSKSTAGSDPSINLSRPLHLDKGSVRPR* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00135 444 SMART iq_5 114 135 IPR000048 GO:0005515
Phac9g00135 444 SMART iq_5 91 113 IPR000048 GO:0005515
Phac9g00135 444 MobiDBLite consensus disorder prediction 18 36 - -
Phac9g00135 444 Gene3D - 91 134 - -
Phac9g00135 444 PANTHER IQ-DOMAIN 5-RELATED 1 408 - -
Phac9g00135 444 MobiDBLite consensus disorder prediction 18 64 - -
Phac9g00135 444 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Phac9g00135 444 Pfam IQ calmodulin-binding motif 116 133 IPR000048 GO:0005515
Phac9g00135 444 MobiDBLite consensus disorder prediction 415 444 - -
Phac9g00135 444 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Phac9g00135 444 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Phac9g00135 444 MobiDBLite consensus disorder prediction 312 370 - -
Phac9g00135 444 FunFam IQ-domain 11 91 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00135 Phac-Chr9 991779 993695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00135 1 444 IQD Protein Family AT2G26180 60.449 6.16e-148 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00135 - - gmx:100799714 709.138