Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00113 ATGGAGGTTGCAATTACGGGTGATGGAGTTAATGATGCACCTGCACTGAAGAAGGCGGATATAGGAATTGCTATGGGTTCAGGAACAGCTGTTGCTAAGAGTGCTTCAGACATGGTGTTGGCTGATGACAACTTTGCCTCTATTGTTGCGTTTATTCGATACATGATTTCTTCCAATATTGGCGAAGTAGTTTGTATATTTGTGGCTGCAGTGCTTGGAATACCGGATACCCTTGCCCCTGTCCAGTTGCTTTGGGTCAATTTGGTTACTGACGGATTGCCTGCCACTGCTATTGGCTTCAGTAAACAAGACTCTGATGTGATGAGGGCTAAGCCTAGAAAGGTGCCGTATTAA 354 0.452 MEVAITGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFSKQDSDVMRAKPRKVPY* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00113 117 Gene3D - 51 114 - -
Phac9g00113 117 PRINTS P-type cation-transporting ATPase superfamily signature 6 25 - -
Phac9g00113 117 PRINTS P-type cation-transporting ATPase superfamily signature 29 41 - -
Phac9g00113 117 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 115 IPR023298 -
Phac9g00113 117 Gene3D - 3 50 IPR023214 -
Phac9g00113 117 Pfam Cation transporting ATPase, C-terminus 76 114 IPR006068 -
Phac9g00113 117 SUPERFAMILY HAD-like 2 56 IPR036412 -
Phac9g00113 117 PANTHER CALCIUM-TRANSPORTING ATPASE 3 116 - -
Phac9g00113 117 Pfam haloacid dehalogenase-like hydrolase 2 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00113 Phac-Chr9 899197 900910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00113 3 115 Primary Pumps ATPases(2) AT1G10130 86.614 9.87e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00113 K05853 - gmx:100783509 207.223