Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00107 ATGGAGAGAGATATATACATTGCTCCACTGGACATTTCTGGCCGAGGTGCTACAGTAATAGATGAAATTTCCCAACATTCCACCTCAAATCCTCTTATGCAGTGCTATTCACTTGACCTGAACAACCAATCTCACGTCATGAATGGAATTTCAATGCTTTCTGGAGAGCAAGTTGAACCTATTAGTAATGTCCATGCTGATGCTTGCTTCATTAATCCATCAATTATTGCTGACTCTAGTCCATTAGTTACATCACGAAGAAAGAGTATTGTGGGAGATGCCTCAAATCCCATGGACAACACTGAGTTTCTGGAGCATTTAGTTGGAGGAGTGCCACTCACTCCTGCTTCGCTTGCTGCCATTCTTGCTGCTAGAATTGGTCTTGAAGAAAATTTGGAGAATTCAGCAGCCCTGCCTCCCTCAATCTGCTCCACGGGGGCACTAGAGGTATTCTTCAACAATTTGCAAGGTACTTCAAACCCTTTGTCTGCAAATTTTGAGGACTGTGATTACAATGAAGTTCATAGTAAGTGGAATGCTAACAAATTTCATAAAGCTCCAGAGATTGGTGGAACTTGTCAGCCTTATTCTTCTATAACAAATCTGGATCCAAATGAATGGGCAACATCAAACGTTGCAAACATGGCCAGTTATGCTTACTGTTCCTCTAACTTTAGTAAAGAACTTTCTCTAAGTCTTGCAACATCTACAACCGCAGGACAGTACTCAGAGGTGACTTGCTCTAATATGACCCCTTGCATGAATGGAACCATTTCCTGCAGCAGTAGTAGGCAACTTTCTATGAATTTGGGTGATAATAAATATGTACAATTTTCATCAGAAGTACTGGAATCGAGATACCTTCTTGGGATTCAAGAGATACTTGCTCAAATTGCACGATATTCATTTGAAAATCTGAAACAATTAAATTATTCAGCACCTGGTAATAGAGCAGGTGGAAACAAGTCAGCTTCAGCTTTTCCACCCATGAGAAATATCTTGACAGATCACAATGCAAATTCTATTCACGAATCTCATGCAGAGTCTCCACTGCAAAGGCGAGTTGCTGAATCGAAGAAAGCCCAGCTGCTGACACTTCTACAACTGGTGGACAATCGATACAGCCAGTGTTTGGATGAGATACATACTGTTATATCTGCATTTCACGCAGCTACCGAGCTGGACCCACAAATACATGCACATTTTGCTCTTCAAACCATCTCTGTTCTTTACAAGGACTTACGGGAGAGGATTAGCAACTACATTCTTGCCATGGGATCAAGTTTCAACAAATCGTGTGCGGAAGAGAATGAATGGTCTATTGAAACTTCATTCCTTCAAAAGCAATGGGCTCTCCAGCAGTTGAAAAGAAAAGATCAGCTGTGGAGGCCCCAGAGAGGCTTGCCAGAAAGATCTGTGTCGGTTCTACGGGCATGGATGTTTCAGAATTTCTTACACCCGTATCCCAAAGATGCAGAGAAGCATTTACTTGCAGTAAAAAGTGGGTTGACAAGAAGTCAGGTATCCAACTGGTTTATAAATGCTCGTGTGCGGCTGTGGAAACCTATGATTGAAGAGATGTATGCTGAAATGAACAAAAGAAAGGCTTGTCGAAATGAAGAAGGAATCCAGAATAACCATGGAAACAGGATAGGCATGGGTAATCAAAGGTTTAATGTTAACTAA 1686 0.4146 MERDIYIAPLDISGRGATVIDEISQHSTSNPLMQCYSLDLNNQSHVMNGISMLSGEQVEPISNVHADACFINPSIIADSSPLVTSRRKSIVGDASNPMDNTEFLEHLVGGVPLTPASLAAILAARIGLEENLENSAALPPSICSTGALEVFFNNLQGTSNPLSANFEDCDYNEVHSKWNANKFHKAPEIGGTCQPYSSITNLDPNEWATSNVANMASYAYCSSNFSKELSLSLATSTTAGQYSEVTCSNMTPCMNGTISCSSSRQLSMNLGDNKYVQFSSEVLESRYLLGIQEILAQIARYSFENLKQLNYSAPGNRAGGNKSASAFPPMRNILTDHNANSIHESHAESPLQRRVAESKKAQLLTLLQLVDNRYSQCLDEIHTVISAFHAATELDPQIHAHFALQTISVLYKDLRERISNYILAMGSSFNKSCAEENEWSIETSFLQKQWALQQLKRKDQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNKRKACRNEEGIQNNHGNRIGMGNQRFNVN* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00107 561 ProSiteProfiles 'Homeobox' domain profile. 459 522 IPR001356 GO:0003677
Phac9g00107 561 Pfam Associated with HOX 282 419 IPR006563 -
Phac9g00107 561 SMART prehox3 276 420 IPR006563 -
Phac9g00107 561 SMART HOX_1 462 526 IPR001356 GO:0003677
Phac9g00107 561 Pfam Homeobox KN domain 479 518 IPR008422 GO:0003677|GO:0006355
Phac9g00107 561 CDD homeodomain 462 523 IPR001356 GO:0003677
Phac9g00107 561 Gene3D - 465 545 - -
Phac9g00107 561 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 209 536 - -
Phac9g00107 561 SUPERFAMILY Homeodomain-like 464 531 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00107 Phac-Chr9 851486 856773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00107 228 546 Homeobox Transcription Factor Family AT4G32980 56.347 1.02e-105 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Phac9g00107 POX 4.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00107 - - gmx:100820354 939.488