Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00068 ATGACTCTTGAAGATTTCTTTACCTTGACTGAGATGAAAGACGGGCTCACAGCACCTTCTCGGGTGCAGGAGCTGGTCTCGGTGATGCAGAAAGAGAAAAGCTGCGAGGTTAAAAATTCTGCTGATGCGACAAGGCAGTGGGCTGCTGTTGCTAGCACTATTGCTGCTACAGAGAATAAAGATTGCCTTGATCTATTTATTCAATTGGATGGACTTTGCTTCATCAACAGATGGTTAAAGGATGCCCAAAAATTTGAGGTTGATGCAAAAGACAGCTTTGTCGAGGAATCAATTACTGCAATGTTACGTGCAGTTGAAAAGCTTCATCTAGACCGTGAGAAGTCAATGTCCTCTGGAATTCGCATCACTGTAAGTAATCTTCTTGGCCATCATAGCACTAAGGTTCAGGATAGAGCAAGGACATTGTTTGACAGCTGGAAGGGAGCTGAAAATGCTGATACTGAGTCTCATGATGTGGAGTTTGCTAAGGCTGACAATGCAAGCAATGAGATTGTCAGGGACGAAGGCCAGCCATCTGCTGTGAATGAAGCTGGCAATGATAATGATAATGCATCAGAACTAAATGGAACTGTAAATTCTCTATTGAAAAGCACAGATAATTTGCTGGTACATAGTTGTGCTAATGTTTGTCATTCATCCTCTAGTTTGGATTGTGATGACGTCAAAGAGGGATCAGTAAACCATGTTGACGGTGTTCCATCTTCTGCTCAAGTAGGACTGCCTTTATGCCCTGCAGATGAGACCACTTCGGTTGCGACCTCTAACTTTTCCCTTCATAATCAAGGCAGCTTTGAAGGACAGTCAGATATGGTTCAGTTAATTGACTTGGCTAAAAGGGAAAAGCAAGAGCAAAACGTTAATGACCCTCCAGAAAAATTTGGAGCACCGGAGATCTGTTCTGTGTCCTCTGAGCCAGAGCTGGAGTCTGTTTCAATTGTTTGCAGTGAAGAAAAAGCACCAGAATCTGTTAAAGGACCAGCTTTGGAGCGAAATGTGGAACACAATGAGGAAGATGTTTGTCATAACTTGCCTATTTCTACTTGTATAAGGACACCTTCATCTGATAGGAGGACTGGGGAAGATGATGTCAGAACTGTAACTAGCTTTACACAAGTTTTCAGAGCTGCTGAAAATGACAATGGCTGTTCTAAAGCATTGCAGGATACATCAGTCAGTGACAGTAACTTGGGAAAGACTGAGGTGCCAGATATGTCTGTCTGTGGAGCAGGATCTGTCACACCATCCAAGGAAGGCAAGGGTCATGTTTATAACAACAAAGATGTTACATCTATTGGTTCTGATTCTAGTAAACCTGAAATAGATTTCAGAAGGTCTAACATTGTTGACAACAGAGGTTCCGGCAATGAACTTGACTGTGGCATTGTGGATCCTTTAGAATTCGCTCGACAAGTTGCTCAGGAAGTTAATAGAGAAGTCAGCAGTTCTTCCGAAAAAATCTCATATGGCAGAATCAGGCAACCAGGCAGTCCAGATTCTGTAAGAAAAGAGGATGTGCTCACTCCTGTCCCACCTGAGGAGGTTTCCTCGAGACACAGTCTTGCTACTGACAACACTGAGGCGGAGCCTGAATGCAGACCTGATGTGGTGTGCTTGGAGGTGACTGAAGCGGTTCAAGATTCAGAAGGTAATTCAGAGAAACGTCCTTGTGGCTTTGATCTCAACGAAGTTGGTTTTGACGATATGGATGTTTGTTTAAATACTACATCGACCCCAATACCTGTTGTATCTGCTTCAAGGCCTACGCCAACTCCTGGGTTACCTGGTGCCCCTTTGCAGTTTGAGGGAACACTTGGTTGGAAAGGATCAGCTGCCACCAGTGCCTTTCGGCCTGCATCTCCTCGTAAATATTGTGATAGTGAGAGAAATCTTTCTGTGGATATGAACTCTGACACTTCCAGGCAGAGGCAGGATTGGCTTGATTTTGATCTAAACGTAGCTGAGGGTGAAGAAGGGAATGCAGAACCTGTTGCTGAATCTTCAGGTGGGCTTTCTGGGCAATCAACAGTTGAATTTAGTTCTAAAAGATCAAGCATGCTTGGATTTGATTTGAACAGTACGGGTGATGATGTTCACATCCAACCTTCAGATCACAGGATGGATGGACAACTCTTTCTTGGAAGAAATGGCTATTGGAGCCCATCACCTACATCGTCATCGTCATCAATGCAGCCATATGTTAGAAACATTGATTTGAATGACAGGCCATGCCTTCAAACTGATTTGGTAGACCTTGGGCACGGTAAGTCTTCTCATATTATCAATGGATATGATTGTTCTAAATCACCAGATGCTCCTGTTATCTCTCTTTTGGGCGCCAAGGTAGAAGTTGGTAAAAAAGAACGTGTTCCTCAATCGTTTTTTCCGAATGGAAAGGCTGTTGAACCTGCAATAGATCTTACAATGCCGAGAGCAGGTGGCATTATAGGGATGGCCCCTGCAGTATCCTTTAATCCATCATCTGGTTTTGGGTATAATGGAGTGCCATCAGCATCAGCAGCACCCACAATGCCTTTTTCATCAGCCATGTACGGGTCAGGTGGCACAATTCCATATATGGTGGACTCAAGAGGATCTCCAGCTGTCCCTCAAGTGGGTGGACCTTCATTAAATATACTTCCATCATCTTACTCTCAGCCACCACCATTCTTTATGAACATGACAGGTACCCAACTCGGTCTGAATGGATTTGGACCTGTACGTCCTAACTTTGACCTGAACTCTGGGTTCATGACTGAGGGTGGGAATAGAGACACATTAGCAGCAAGGCAATTTTTCTTTCCTGGTCAGGGAAGGGCTGTGGAGGAGCAAGTAAGAACCATGCCGCAACCCTCAAGTTCAGGGGTTGGTGGGAAACGAAAGGAACCAGACAGTGGTTGGGAACCCTACCCATATAGCTACAAACATTCGCAACCTCCATGGAAGTAG 2967 0.4442 MTLEDFFTLTEMKDGLTAPSRVQELVSVMQKEKSCEVKNSADATRQWAAVASTIAATENKDCLDLFIQLDGLCFINRWLKDAQKFEVDAKDSFVEESITAMLRAVEKLHLDREKSMSSGIRITVSNLLGHHSTKVQDRARTLFDSWKGAENADTESHDVEFAKADNASNEIVRDEGQPSAVNEAGNDNDNASELNGTVNSLLKSTDNLLVHSCANVCHSSSSLDCDDVKEGSVNHVDGVPSSAQVGLPLCPADETTSVATSNFSLHNQGSFEGQSDMVQLIDLAKREKQEQNVNDPPEKFGAPEICSVSSEPELESVSIVCSEEKAPESVKGPALERNVEHNEEDVCHNLPISTCIRTPSSDRRTGEDDVRTVTSFTQVFRAAENDNGCSKALQDTSVSDSNLGKTEVPDMSVCGAGSVTPSKEGKGHVYNNKDVTSIGSDSSKPEIDFRRSNIVDNRGSGNELDCGIVDPLEFARQVAQEVNREVSSSSEKISYGRIRQPGSPDSVRKEDVLTPVPPEEVSSRHSLATDNTEAEPECRPDVVCLEVTEAVQDSEGNSEKRPCGFDLNEVGFDDMDVCLNTTSTPIPVVSASRPTPTPGLPGAPLQFEGTLGWKGSAATSAFRPASPRKYCDSERNLSVDMNSDTSRQRQDWLDFDLNVAEGEEGNAEPVAESSGGLSGQSTVEFSSKRSSMLGFDLNSTGDDVHIQPSDHRMDGQLFLGRNGYWSPSPTSSSSSMQPYVRNIDLNDRPCLQTDLVDLGHGKSSHIINGYDCSKSPDAPVISLLGAKVEVGKKERVPQSFFPNGKAVEPAIDLTMPRAGGIIGMAPAVSFNPSSGFGYNGVPSASAAPTMPFSSAMYGSGGTIPYMVDSRGSPAVPQVGGPSLNILPSSYSQPPPFFMNMTGTQLGLNGFGPVRPNFDLNSGFMTEGGNRDTLAARQFFFPGQGRAVEEQVRTMPQPSSSGVGGKRKEPDSGWEPYPYSYKHSQPPWK* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00068 988 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 17 150 IPR035441 -
Phac9g00068 988 MobiDBLite consensus disorder prediction 391 406 - -
Phac9g00068 988 MobiDBLite consensus disorder prediction 946 988 - -
Phac9g00068 988 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 988 - -
Phac9g00068 988 ProSiteProfiles TFIIS N-terminal domain profile. 73 153 IPR017923 -
Phac9g00068 988 MobiDBLite consensus disorder prediction 391 410 - -
Phac9g00068 988 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 156 IPR035441 -
Phac9g00068 988 MobiDBLite consensus disorder prediction 418 444 - -
Phac9g00068 988 Pfam TFIIS helical bundle-like domain 101 148 IPR017923 -
Phac9g00068 988 MobiDBLite consensus disorder prediction 493 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00068 Phac-Chr9 536547 539513 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Phac9g00068 Med26 0.00016 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00068 - - gmx:102664074 1463.36