Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00027 ATGACTCAAAGAGAAGAAGTTGTGCTTCATTTCGAAGATAACAATGGCCGCAGCAACAGCAAAGAAGAAAAATTTGCATCAAAAGGTGTTGTCAACAGTCCAAGTGATAAGATTCATCAAGACTTGCAGGAAAAACGCAAAGGCAGTGAATCAACAAAAAAGAGGAAGCAGGATCAGCAAAGAAACCAAGAAAGTCACCTCCAAACTTCACATTCAGAAGAAAACGTTGCGAGGTCCACTTCGAACAGTTCAACTCCACGATACTCGTGGAAATCATCAATAAGCAGAACAAAGTCTCGGCTGATAGACCCTCCAGAGGAATCATGTGCAAATTCAGAGTCAAGTGAACAAAAAGTGGCAGAAAATGATGACAGTGTTGAGGACATGCCAGAAATTTATAAGAAAACGAGGTTCAGTGCGTTCTCACTACTTCAGTGGCTATGTCTTTCCTCAATAATCGTAGCCTTGCTTTCAAACCTTTGGATATCTTGCTTACAGAAACTCAAACTCTGTGGCCTTCCCCTGTGGGAATGGGAGACAATGATTTTAGTTCTAATTTGTGGGCGTTTGCTCTCAGGTTGGGTAATCAAGCTAATCGTCTTCTTCGTGGAACGCAATTTTATACTAAGAAAACGAGTGCTGTATTTTGTGTACGGTTTGAAACACTCGGTGAAAAACTGTGTCTGGTTGGGTCTTGTTCTGCTGGTGTGGCATTTTATATTGGTCAACGCGGTGAAGAAAAAAGTCAACGACAGGTTTTTGTCGTGTGTGACAAAGGTTGTGTTGTGTCTGTTCATCGGCACACTGATATGGCTTCTTAAAACTATCCTGGTGAAGGTCTTCGCCTTGCACTTCCACGTGAAAACGTTCTTCGAACGTATTCGGGAGGCTCTGTTCAGCCAATACGTGATCGAAACGCTGTCGTGTGATCGGTTGAGGGAAGAGGAAGAAGGTGAAGATAGATCCGTTGGGAGGGTGTTGTGTAATAAGAAGAAGCAAGATGAGGAAATGTCGATTGAGCAGTTGCATAGGTTGAATAAGAAAAATATATCAGCGTGGAATATGAAGAGAATGATTAACATCGTCATGCACGGGGCGTTTATTACTACATTGGACGAACGCATTTCGTGTTCAGATGTTGAGGATGAGCCTTTGCTGCAACTCAGAAGCGAACACCAAGCAAAGATCGCGGCTCAGAAAATTTTCCATAACGTGGCGCAGCCAGGATCCCCATGTATTTTGTTGCAAGATGTGATGCAGTTTATGCGAAGAGACGAGGCTTTGAAGTCAATGGATTTGTTGGGAGGAGCGTGTACCGACCAGGGGATTAGCATGTCTTCTCTTAGAGAGTGGATGGTGAATGCATTCAGGGAGAGAAGGGCACTAGCACTATCACTCAAAGACACAAAAACTGCTGTGGATGAGCTCCATAATATGTTGAACATGATTGTTGGTATTGTCATTTTAGTAGTCTGGCTTGTCCTACTCGGAACTCCAATCCTACACTTCCTTGTCTTCACTGCATCCCAGCTTCTGTTGGCAGTGTTTGTGTTTGGGAATTCTTGTAGAACTGTTTTTGAAGCAATCATCTTCTTATTTGTCATGCACCCATTTGATGTTGGAGATCGATGTGAAGTTGATGGAGTCCAGATGGTAGTGGAAGAGATGAATATACTCACAACAGTGTTTCTGAAGAGCGATAACCAAAAGCTTACGTACCCAAACAGTGTTCTGGCTACCAAGCCGATTAGTAACTATCAACGTAGTCCAGACATGGGAGAAGCAGTTGATTTCTGCATTCATATCTCCACTCCATTAGATAAAGTTGCAACTATGAAAAGAAGAATTATAGAGTATATTGAAAGGAAGAATGAACAGTGGCATGTGGCACCAATGGTGATAATGAAGGATGTGGAAGACTTGAACAAAGTGAACATGTCAGTGTGGCTTACACACAAAATGAATTATCAGAACATGAAAGAAAGATGGGAAAGGAGGGCACAGTTGATTGAAGAGATGATGAAAGTGTTGAAGGAACTTGATGTTGAATACAGGCTTCTCCCTGTTGATGTGAATGTTAGAAATCAACCTCCTCTGCTTTCGAACACGCTTCCATCCAATTGGAAAACTTGTGCCACCTCTATGTCTTAG 2151 0.424 MTQREEVVLHFEDNNGRSNSKEEKFASKGVVNSPSDKIHQDLQEKRKGSESTKKRKQDQQRNQESHLQTSHSEENVARSTSNSSTPRYSWKSSISRTKSRLIDPPEESCANSESSEQKVAENDDSVEDMPEIYKKTRFSAFSLLQWLCLSSIIVALLSNLWISCLQKLKLCGLPLWEWETMILVLICGRLLSGWVIKLIVFFVERNFILRKRVLYFVYGLKHSVKNCVWLGLVLLVWHFILVNAVKKKVNDRFLSCVTKVVLCLFIGTLIWLLKTILVKVFALHFHVKTFFERIREALFSQYVIETLSCDRLREEEEGEDRSVGRVLCNKKKQDEEMSIEQLHRLNKKNISAWNMKRMINIVMHGAFITTLDERISCSDVEDEPLLQLRSEHQAKIAAQKIFHNVAQPGSPCILLQDVMQFMRRDEALKSMDLLGGACTDQGISMSSLREWMVNAFRERRALALSLKDTKTAVDELHNMLNMIVGIVILVVWLVLLGTPILHFLVFTASQLLLAVFVFGNSCRTVFEAIIFLFVMHPFDVGDRCEVDGVQMVVEEMNILTTVFLKSDNQKLTYPNSVLATKPISNYQRSPDMGEAVDFCIHISTPLDKVATMKRRIIEYIERKNEQWHVAPMVIMKDVEDLNKVNMSVWLTHKMNYQNMKERWERRAQLIEEMMKVLKELDVEYRLLPVDVNVRNQPPLLSNTLPSNWKTCATSMS* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00027 716 Gene3D - 537 586 IPR023408 -
Phac9g00027 716 MobiDBLite consensus disorder prediction 38 62 - -
Phac9g00027 716 Coils Coil 653 680 - -
Phac9g00027 716 Coils Coil 39 59 - -
Phac9g00027 716 MobiDBLite consensus disorder prediction 63 99 - -
Phac9g00027 716 MobiDBLite consensus disorder prediction 1 125 - -
Phac9g00027 716 Pfam Mechanosensitive ion channel 478 683 IPR006685 GO:0016020|GO:0055085
Phac9g00027 716 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 5 708 IPR016688 -
Phac9g00027 716 PIRSF Memb_At2g17000 1 715 IPR016688 -
Phac9g00027 716 MobiDBLite consensus disorder prediction 1 24 - -
Phac9g00027 716 FunFam Predicted mechanosensitive ion channel 537 586 - -
Phac9g00027 716 SUPERFAMILY Sm-like ribonucleoproteins 527 586 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00027 Phac-Chr9 217765 220681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00027 52 714 Mechanosensitive Ion Channel Family AT1G78610 48.214 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00027 K22048 - cave:132190409 830.091