Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00026 ATGACTCAAAGAGAAGAAGTTGTGCTTCATTTCGAAGATAACAATGGCCGCAGCAACAGCAAAGAAGAAAAATTTGCATCAAAAGGTGTTGTCAACAGTCCAAGTGATAAGATTCATCAAGACTTGCAGGAAAAACGCAAAGGCAGTGAATCAACAAAAAAGAGGAAGCAGGATCAGCAAAGAAACCAAGAAAGTCACCTCCAAACTTCACATTCAGAAGAAAACGTTGCGAGGTCCACTTCGAACAGTTCAACTCCACGATACTCGTGGAAATCATCAATAAGCAGAACAAAGTCTCGGCTGATAGACCCTCCAGAGGAATCATGTGCAAATTCAGAGTCAAGTGAACAAAAAGTGGCAGAAAATGATGACAGTGTTGAGGACATGCCAGAAATTTATAAGAAAACGAGGTTCAGTGCGTTCTCACTACTTCAGTGGCTATGTCTTTCCTCAATAATCGTAGCCTTGCTTTCAAACCTTTGGATATCTTGCTTACAGAAACTCAAACTCTGTGGCCTTCCCCTGTGGGAATGGGAGACAATGATTTTAGTTCTAATTTGTGGGCGTTTGCTCTCAGGTTGGGTAATCAAGCTAATCGTCTTCTTCGTGGAACGCAATTTTATACTAAGAAAACGAGTGCTGTATTTTGTGTACGGTTTGAAACACTCGGTGAAAAACTGTGTCTGGTTGGGTCTTGTTCTGCTGGTGTGGCATTTTATATTGGTCAACGCGGTGAAGAAAAAAGTCAACGACAGGTTTTTGTCGTGTGTGACAAAGGTTGTGTTGTGTCTGTTCATCGGCACACTGATATGGCTTCTTAAAACTATCCTGGTGAAGGTCTTCGCCTTGCACTTCCACGTGAAAACGTTCTTCGAACGTATTCGGGAGGCTCTGTTCAGCCAATACGTGATCGAAACGCTGTCGTGTGATCGGTTGAGGGAAGAGGAAGAAGGTGAAGATAGATCCGTTGGGAGGGTGTTGTGTAATAAGAAGAAGCAAGATGAGGAAATGTCGATTGAGCAGTTGCATAGGTTGAATAAGAAAAATATATCAGCGTGGAATATGAAGAGAATGATTAACATCGTCATGCACGGGGCGTTTATTACTACATTGGACGAACGCATTTCGTGTTCAGATGTTGAGGATGAGCCTTTGCTGCAACTCAGAAGCGAACACCAAGCAAAGATCGCGGCTCAGAAAATTTTCCATAACGTGGCGCAGCCAGGATCCCCATGTATTTTGTTGCAAGATGTGATGCAGTTTATGCGAAGAGACGAGGCTTTGAAGTCAATGGATTTGTTGGGAGGAGCGTGTACCGACCAGGGGATTAGCATGTCTTCTCTTAGAGAGTGGATGGTGAATGCATTCAGGGAGAGAAGGGCACTAGCACTATCACTCAAAGACACAAAAACTGCTGTGGATGAGCTCCATAATATGTTGAACATGATTGTTGGTATTGTCATTTTAGTAGTCTGGCTTGTCCTACTCGGAACTCCAATCCTACACTTCCTTGTCTTCACTGCATCCCAGCTTCTGTTGGCAGTGTTTGTGTTTGGGAATTCTTGTAGAACTGTTTTTGAAGCAATCATCTTCTTATTTGTCATGCACCCATTTGATGTTGGAGATCGATGTGAAGTTGATGGAGTCCAGATGGTAGTGGAAGAGATGAATATACTCACAACAGTGTTTCTGAAGAGCGATAACCAAAAGCTTACGTACCCAAACAGTGTTCTGGCTACCAAGCCGATTAGTAACTATCAACGTAGTCCAGACATGGGAGAAGCAGTTGATTTCTGCATTCATATCTCCACTCCATTAGATAAAGTTGCAACTATGAAAAGAAGAATTATAGAGTATGTGAATTACATTTATTTCAGTGCATGGAGTGTGGGAACATTTACTCTTAACATGTTTTGTAAATTGTAG 1926 0.4226 MTQREEVVLHFEDNNGRSNSKEEKFASKGVVNSPSDKIHQDLQEKRKGSESTKKRKQDQQRNQESHLQTSHSEENVARSTSNSSTPRYSWKSSISRTKSRLIDPPEESCANSESSEQKVAENDDSVEDMPEIYKKTRFSAFSLLQWLCLSSIIVALLSNLWISCLQKLKLCGLPLWEWETMILVLICGRLLSGWVIKLIVFFVERNFILRKRVLYFVYGLKHSVKNCVWLGLVLLVWHFILVNAVKKKVNDRFLSCVTKVVLCLFIGTLIWLLKTILVKVFALHFHVKTFFERIREALFSQYVIETLSCDRLREEEEGEDRSVGRVLCNKKKQDEEMSIEQLHRLNKKNISAWNMKRMINIVMHGAFITTLDERISCSDVEDEPLLQLRSEHQAKIAAQKIFHNVAQPGSPCILLQDVMQFMRRDEALKSMDLLGGACTDQGISMSSLREWMVNAFRERRALALSLKDTKTAVDELHNMLNMIVGIVILVVWLVLLGTPILHFLVFTASQLLLAVFVFGNSCRTVFEAIIFLFVMHPFDVGDRCEVDGVQMVVEEMNILTTVFLKSDNQKLTYPNSVLATKPISNYQRSPDMGEAVDFCIHISTPLDKVATMKRRIIEYVNYIYFSAWSVGTFTLNMFCKL* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00026 641 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 5 621 IPR016688 -
Phac9g00026 641 MobiDBLite consensus disorder prediction 38 62 - -
Phac9g00026 641 Coils Coil 39 59 - -
Phac9g00026 641 MobiDBLite consensus disorder prediction 63 99 - -
Phac9g00026 641 FunFam Predicted mechanosensitive ion channel 537 586 - -
Phac9g00026 641 Pfam Mechanosensitive ion channel 478 618 IPR006685 GO:0016020|GO:0055085
Phac9g00026 641 PIRSF Memb_At2g17000 1 622 IPR016688 -
Phac9g00026 641 MobiDBLite consensus disorder prediction 1 125 - -
Phac9g00026 641 Gene3D - 537 586 IPR023408 -
Phac9g00026 641 SUPERFAMILY Sm-like ribonucleoproteins 527 586 IPR010920 -
Phac9g00026 641 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00026 Phac-Chr9 217765 220681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00026 52 620 Mechanosensitive Ion Channel Family AT1G78610 47.778 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00026 K22048 - cave:132190409 687.952