Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00025 ATGGGAGACACAGAGAGTTGCAATAGAGGAATTTTAAATTCTGGATGGAATCATCGATGTTCAAAACAGAGACAGAAGGTTGGAGTTTATAACGAGGTTTTGTGTAGACTCAAGGAGTTGAATGTCCCAGAGGCTGTGCTTCCTGGTTTTGAGGACGATCTTTGGACGCACTTCTATCGCCTCCCCGCCAGATATGCGTTGGACATGAATGTGGAGAGGGCAGAAGAAGTTTTGATGCATAAGAGGTTACTGGACATTGCAGGAGGCCCAACTACAGCAACCAAACCTGCAGTTGAAGTTCGTCTTGTACAGGTTCGTTCCACTTCTGCTTCTGCTGGTGGTTCTAGTAAATCCATTCTTTCAAATTCACAAAGTAAAGTTTGTCCTGAAGATTCTGGTATTCAAGGCAACACGAGCTTCCATCCTCCTCCAGCCTTCGCTTCGTCATCTAATGTGGAACATGCACTTGGCCACGCCCAGTTCTTACCAGTCCGAGACAGGGATAACTATTTGAATTTTTATGCACATTATGCTCGGCCTATGCATGAAATCACAATTTCAACAAATGACAAGCCAAAACTTCTGAGTCAGTTGACTTCCTTACTTTCTGAGACTGGGTTGGACATTCTAGAAGCACATGCTTTTTCGACAATAGACGGTTATTCATTGGATGTTTTTGTTGTTGGTGGTTGGCCAATTGAGGAGACGGAGAAGTTAAAACATGAACTAGCAAAGAAAATTCAGAAACTCCAGCAACATCAATTGAAAGAAAATGGGAGTATTCCTACTAATACTACTGCAAAGCAAGAGCAGACCGGGATGAACTTTATCTGGAGAATTGATGCCGGGTGTTTGAGATATGAAAATAAAATTGCATCTGGACCTTTCAGTGATTTGTATAAAGGTACATTCTGCAATCAAGATGTAGCTATCAAGGTTCTAAAGCACGATAATTTGAATGAAAATATACAAAGGGAGTTTGCTCAGGAAGTGTATATCCTAAGTAAAATTCAGCACAGAAATGTTGTTAAATTTGTTGGCGCTTGTACAAAACCCCCAAACCTGTACCTAGTCACAGAATACATGCCTGGTGGAAGTATGTTCGACTTTTTGCATAAACAGAAGACAGCCCTTACTCTTCCATCTTTACTCAAAGTGGCCATTGATGTTTCCGAAGGAATGAAATATCTGCATCAGAATAATATCATACATCGGGACCTTAAAGCGTCTAATCTTTTGATAGATGAGAATGGGGTAGTTAAGGTTGCTGATTTTGGCGTGGCTAGAGTGCACAATCAGTCTGGCATAATGACTGCAGAAACAGGAACTTATCGGTGGATGGCTCCAGAGGTTATTGAACATAGACCATATGATCACAAAGCCGATGTCTTTAGCTTTGCCATTGTTCTTTGGGAACTTCTCACAGGAAAGCTTCCTTATGAGCACTTGTCCCCATTGCAAGCAGCAGTAGGAGTGATCCAGAAGGGTTTAAGGCCTAAAATTCCAAGCCATACTCATTCAAAGTTAGTGGAATTGCTTCACTGGTGCTGGCACCACGATTCATCTCTCAGACCCAATTTCTCAGAAATTCTTGAATTTCTGCTGCGTGTGACCAAGACGGTCACGGGGGAATGTGAAGGCTAG 1644 0.4215 MGDTESCNRGILNSGWNHRCSKQRQKVGVYNEVLCRLKELNVPEAVLPGFEDDLWTHFYRLPARYALDMNVERAEEVLMHKRLLDIAGGPTTATKPAVEVRLVQVRSTSASAGGSSKSILSNSQSKVCPEDSGIQGNTSFHPPPAFASSSNVEHALGHAQFLPVRDRDNYLNFYAHYARPMHEITISTNDKPKLLSQLTSLLSETGLDILEAHAFSTIDGYSLDVFVVGGWPIEETEKLKHELAKKIQKLQQHQLKENGSIPTNTTAKQEQTGMNFIWRIDAGCLRYENKIASGPFSDLYKGTFCNQDVAIKVLKHDNLNENIQREFAQEVYILSKIQHRNVVKFVGACTKPPNLYLVTEYMPGGSMFDFLHKQKTALTLPSLLKVAIDVSEGMKYLHQNNIIHRDLKASNLLIDENGVVKVADFGVARVHNQSGIMTAETGTYRWMAPEVIEHRPYDHKADVFSFAIVLWELLTGKLPYEHLSPLQAAVGVIQKGLRPKIPSHTHSKLVELLHWCWHHDSSLRPNFSEILEFLLRVTKTVTGECEG* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00025 547 ProSiteProfiles Protein kinase domain profile. 285 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00025 547 Gene3D Phosphorylase Kinase; domain 1 275 361 - -
Phac9g00025 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Phac9g00025 547 Coils Coil 233 256 - -
Phac9g00025 547 SUPERFAMILY ACT-like 181 251 IPR045865 -
Phac9g00025 547 SUPERFAMILY Protein kinase-like (PK-like) 266 534 IPR011009 -
Phac9g00025 547 Gene3D Transferase(Phosphotransferase) domain 1 362 545 - -
Phac9g00025 547 ProSiteProfiles ACT domain profile. 183 262 IPR002912 -
Phac9g00025 547 Pfam Protein tyrosine and serine/threonine kinase 286 534 IPR001245 GO:0004672|GO:0006468
Phac9g00025 547 PRINTS Tyrosine kinase catalytic domain signature 442 452 IPR001245 GO:0004672|GO:0006468
Phac9g00025 547 PRINTS Tyrosine kinase catalytic domain signature 359 372 IPR001245 GO:0004672|GO:0006468
Phac9g00025 547 PRINTS Tyrosine kinase catalytic domain signature 505 527 IPR001245 GO:0004672|GO:0006468
Phac9g00025 547 PRINTS Tyrosine kinase catalytic domain signature 396 414 IPR001245 GO:0004672|GO:0006468
Phac9g00025 547 PRINTS Tyrosine kinase catalytic domain signature 461 483 IPR001245 GO:0004672|GO:0006468
Phac9g00025 547 CDD STKc_MAP3K-like 291 534 - -
Phac9g00025 547 SMART serkin_6 285 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00025 547 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 122 534 - -
Phac9g00025 547 FunFam Serine/threonine-protein kinase isoform 1 275 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00025 Phac-Chr9 208296 215806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00025 5 541 MAP Kinase Kinase Kinase AT4G35780 55.535 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phac9g00025 PK_Tyr_Ser-Thr 9.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00025 - - vra:106761427 994.956