Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00024 ATGGGGTTAGCCAAGCTACCGGATTCAGTAAACATGGGAGACACAGAGAGTTGCAATAGAGGAATTTTAAATTCTGGATGGAATCATCGATGTTCAAAACAGAGACAGAAGGTTGGAGTTTATAACGAGGTTTTGTGTAGACTCAAGGAGTTGAATGTCCCAGAGGCTGTGCTTCCTGGTTTTGAGGACGATCTTTGGACGCACTTCTATCGCCTCCCCGCCAGATATGCGTTGGACATGAATGTGGAGAGGGCAGAAGAAGTTTTGATGCATAAGAGGTTACTGGACATTGCAGGAGGCCCAACTACAGCAACCAAACCTGCAGTTGAAGTTCGTCTTGTACAGGTTCGTTCCACTTCTGCTTCTGCTGGTGGTTCTAGTAAATCCATTCTTTCAAATTCACAAAGTAAAGTTTGTCCTGAAGATTCTGGTATTCAAGGCAACACGAGCTTCCATCCTCCTCCAGCCTTCGCTTCGTCATCTAATGTGGAACATGCACTTGGCCACGCCCAGTTCTTACCAGTCCGAGACAGGGATAACTATTTGAATTTTTATGCACATTATGCTCGGCCTATGCATGAAATCACAATTTCAACAAATGACAAGCCAAAACTTCTGAGTCAGTTGACTTCCTTACTTTCTGAGACTGGGTTGGACATTCTAGAAGCACATGCTTTTTCGACAATAGACGGTTATTCATTGGATGTTTTTGTTGTTGGTGGTTGGCCAATTGAGGAGACGGAGAAGTTAAAACATGAACTAGCAAAGAAAATTCAGAAACTCCAGCAACATCAATTGAAAGAAAATGGGAGTATTCCTACTAATACTACTGCAAAGCAAGAGCAGACCGGGATGAACTTTATCTGGAGAATTGATGCCGGGTGTTTGAGATATGAAAATAAAATTGCATCTGGACCTTTCAGTGATTTGTATAAAGGTACATTCTGCAATCAAGATGTAGCTATCAAGGTTCTAAAGCACGATAATTTGAATGAAAATATACAAAGGGAGTTTGCTCAGGAAGTGTATATCCTAAGTAAAATTCAGCACAGAAATGTTGTTAAATTTGTTGGCGCTTGTACAAAACCCCCAAACCTGTACCTAGTCACAGAATACATGCCTGGTGGAAGTATGTTCGACTTTTTGCATAAACAGAAGACAGCCCTTACTCTTCCATCTTTACTCAAAGTGGCCATTGATGTTTCCGAAGGAATGAAATATCTGCATCAGAATAATATCATACATCGGGACCTTAAAGCGTCTAATCTTTTGATAGATGAGAATGGGGTAGTTAAGGTTGCTGATTTTGGCGTGGCTAGAGTGCACAATCAGTCTGGCATAATGACTGCAGAAACAGGAACTTATCGGTGGATGGCTCCAGAGGTTATTGAACATAGACCATATGATCACAAAGCCGATGTCTTTAGCTTTGCCATTGTTCTTTGGGAACTTCTCACAGGAAAGCTTCCTTATGAGCACTTGTCCCCATTGCAAGCAGCAGTAGGAGTGATCCAGAAGGGTTTAAGGCCTAAAATTCCAAGCCATACTCATTCAAAGTTAGTGGAATTGCTTCACTGGTGCTGGCACCACGATTCATCTCTCAGACCCAATTTCTCAGAAATTCTTGAATTTCTGCTGCGTGTGACCAAGACGGTCACGGGGGAATGTGAAGGCTAG 1677 0.4228 MGLAKLPDSVNMGDTESCNRGILNSGWNHRCSKQRQKVGVYNEVLCRLKELNVPEAVLPGFEDDLWTHFYRLPARYALDMNVERAEEVLMHKRLLDIAGGPTTATKPAVEVRLVQVRSTSASAGGSSKSILSNSQSKVCPEDSGIQGNTSFHPPPAFASSSNVEHALGHAQFLPVRDRDNYLNFYAHYARPMHEITISTNDKPKLLSQLTSLLSETGLDILEAHAFSTIDGYSLDVFVVGGWPIEETEKLKHELAKKIQKLQQHQLKENGSIPTNTTAKQEQTGMNFIWRIDAGCLRYENKIASGPFSDLYKGTFCNQDVAIKVLKHDNLNENIQREFAQEVYILSKIQHRNVVKFVGACTKPPNLYLVTEYMPGGSMFDFLHKQKTALTLPSLLKVAIDVSEGMKYLHQNNIIHRDLKASNLLIDENGVVKVADFGVARVHNQSGIMTAETGTYRWMAPEVIEHRPYDHKADVFSFAIVLWELLTGKLPYEHLSPLQAAVGVIQKGLRPKIPSHTHSKLVELLHWCWHHDSSLRPNFSEILEFLLRVTKTVTGECEG* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00024 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Phac9g00024 558 FunFam Serine/threonine-protein kinase isoform 1 286 374 - -
Phac9g00024 558 Gene3D Phosphorylase Kinase; domain 1 286 372 - -
Phac9g00024 558 Gene3D Transferase(Phosphotransferase) domain 1 373 556 - -
Phac9g00024 558 Pfam Protein tyrosine and serine/threonine kinase 297 545 IPR001245 GO:0004672|GO:0006468
Phac9g00024 558 CDD STKc_MAP3K-like 302 545 - -
Phac9g00024 558 ProSiteProfiles Protein kinase domain profile. 296 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00024 558 SUPERFAMILY ACT-like 192 262 IPR045865 -
Phac9g00024 558 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672|GO:0006468
Phac9g00024 558 PRINTS Tyrosine kinase catalytic domain signature 453 463 IPR001245 GO:0004672|GO:0006468
Phac9g00024 558 PRINTS Tyrosine kinase catalytic domain signature 370 383 IPR001245 GO:0004672|GO:0006468
Phac9g00024 558 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672|GO:0006468
Phac9g00024 558 PRINTS Tyrosine kinase catalytic domain signature 407 425 IPR001245 GO:0004672|GO:0006468
Phac9g00024 558 SUPERFAMILY Protein kinase-like (PK-like) 277 545 IPR011009 -
Phac9g00024 558 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 133 545 - -
Phac9g00024 558 SMART serkin_6 296 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00024 558 ProSiteProfiles ACT domain profile. 194 273 IPR002912 -
Phac9g00024 558 Coils Coil 244 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00024 Phac-Chr9 208271 215806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00024 16 552 MAP Kinase Kinase Kinase AT4G35780 55.535 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phac9g00024 PK_Tyr_Ser-Thr 9.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00024 - - vra:106761427 994.956