Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00023 ATGGTTAATTCTTGTGTACAATCCACGTCGAATGGGGTTAGCCAAGCTACCGTAAACATGGGAGACACAGAGAGTTGCAATAGAGGAATTTTAAATTCTGGATGGAATCATCGATGTTCAAAACAGAGACAGAAGGTTGGAGTTTATAACGAGGTTTTGTGTAGACTCAAGGAGTTGAATGTCCCAGAGGCTGTGCTTCCTGGTTTTGAGGACGATCTTTGGACGCACTTCTATCGCCTCCCCGCCAGATATGCGTTGGACATGAATGTGGAGAGGGCAGAAGAAGTTTTGATGCATAAGAGGTTACTGGACATTGCAGGAGGCCCAACTACAGCAACCAAACCTGCAGTTGAAGTTCGTCTTGTACAGGTTCGTTCCACTTCTGCTTCTGCTGGTGGTTCTAGTAAATCCATTCTTTCAAATTCACAAAGTAAAGTTTGTCCTGAAGATTCTGGTATTCAAGGCAACACGAGCTTCCATCCTCCTCCAGCCTTCGCTTCGTCATCTAATGTGGAACATGCACTTGGCCACGCCCAGTTCTTACCAGTCCGAGACAGGGATAACTATTTGAATTTTTATGCACATTATGCTCGGCCTATGCATGAAATCACAATTTCAACAAATGACAAGCCAAAACTTCTGAGTCAGTTGACTTCCTTACTTTCTGAGACTGGGTTGGACATTCTAGAAGCACATGCTTTTTCGACAATAGACGGTTATTCATTGGATGTTTTTGTTGTTGGTGGTTGGCCAATTGAGGAGACGGAGAAGTTAAAACATGAACTAGCAAAGAAAATTCAGAAACTCCAGCAACATCAATTGAAAGAAAATGGGAGTATTCCTACTAATACTACTGCAAAGCAAGAGCAGACCGGGATGAACTTTATCTGGAGAATTGATGCCGGGTGTTTGAGATATGAAAATAAAATTGCATCTGGACCTTTCAGTGATTTGTATAAAGGTACATTCTGCAATCAAGATGTAGCTATCAAGGTTCTAAAGCACGATAATTTGAATGAAAATATACAAAGGGAGTTTGCTCAGGAAGTGTATATCCTAAGTAAAATTCAGCACAGAAATGTTGTTAAATTTGTTGGCGCTTGTACAAAACCCCCAAACCTGTACCTAGTCACAGAATACATGCCTGGTGGAAGTATGTTCGACTTTTTGCATAAACAGAAGACAGCCCTTACTCTTCCATCTTTACTCAAAGTGGCCATTGATGTTTCCGAAGGAATGAAATATCTGCATCAGAATAATATCATACATCGGGACCTTAAAGCGTCTAATCTTTTGATAGATGAGAATGGGGTAGTTAAGGTTGCTGATTTTGGCGTGGCTAGAGTGCACAATCAGTCTGGCATAATGACTGCAGAAACAGGAACTTATCGGTGGATGGCTCCAGAGGTTATTGAACATAGACCATATGATCACAAAGCCGATGTCTTTAGCTTTGCCATTGTTCTTTGGGAACTTCTCACAGGAAAGCTTCCTTATGAGCACTTGTCCCCATTGCAAGCAGCAGTAGGAGTGATCCAGAAGGGTTTAAGGCCTAAAATTCCAAGCCATACTCATTCAAAGTTAGTGGAATTGCTTCACTGGTGCTGGCACCACGATTCATCTCTCAGACCCAATTTCTCAGAAATTCTTGAATTTCTGCTGCGTGTGACCAAGACGGTCACGGGGGAATGTGAAGGCTAG 1701 0.4221 MVNSCVQSTSNGVSQATVNMGDTESCNRGILNSGWNHRCSKQRQKVGVYNEVLCRLKELNVPEAVLPGFEDDLWTHFYRLPARYALDMNVERAEEVLMHKRLLDIAGGPTTATKPAVEVRLVQVRSTSASAGGSSKSILSNSQSKVCPEDSGIQGNTSFHPPPAFASSSNVEHALGHAQFLPVRDRDNYLNFYAHYARPMHEITISTNDKPKLLSQLTSLLSETGLDILEAHAFSTIDGYSLDVFVVGGWPIEETEKLKHELAKKIQKLQQHQLKENGSIPTNTTAKQEQTGMNFIWRIDAGCLRYENKIASGPFSDLYKGTFCNQDVAIKVLKHDNLNENIQREFAQEVYILSKIQHRNVVKFVGACTKPPNLYLVTEYMPGGSMFDFLHKQKTALTLPSLLKVAIDVSEGMKYLHQNNIIHRDLKASNLLIDENGVVKVADFGVARVHNQSGIMTAETGTYRWMAPEVIEHRPYDHKADVFSFAIVLWELLTGKLPYEHLSPLQAAVGVIQKGLRPKIPSHTHSKLVELLHWCWHHDSSLRPNFSEILEFLLRVTKTVTGECEG* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00023 566 FunFam Serine/threonine-protein kinase isoform 1 294 382 - -
Phac9g00023 566 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 134 553 - -
Phac9g00023 566 ProSiteProfiles ACT domain profile. 202 281 IPR002912 -
Phac9g00023 566 Pfam Protein tyrosine and serine/threonine kinase 305 553 IPR001245 GO:0004672|GO:0006468
Phac9g00023 566 Coils Coil 252 275 - -
Phac9g00023 566 Gene3D Transferase(Phosphotransferase) domain 1 381 564 - -
Phac9g00023 566 SUPERFAMILY ACT-like 200 270 IPR045865 -
Phac9g00023 566 ProSiteProfiles Protein kinase domain profile. 304 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00023 566 SUPERFAMILY Protein kinase-like (PK-like) 285 553 IPR011009 -
Phac9g00023 566 PRINTS Tyrosine kinase catalytic domain signature 524 546 IPR001245 GO:0004672|GO:0006468
Phac9g00023 566 PRINTS Tyrosine kinase catalytic domain signature 378 391 IPR001245 GO:0004672|GO:0006468
Phac9g00023 566 PRINTS Tyrosine kinase catalytic domain signature 415 433 IPR001245 GO:0004672|GO:0006468
Phac9g00023 566 PRINTS Tyrosine kinase catalytic domain signature 480 502 IPR001245 GO:0004672|GO:0006468
Phac9g00023 566 PRINTS Tyrosine kinase catalytic domain signature 461 471 IPR001245 GO:0004672|GO:0006468
Phac9g00023 566 Gene3D Phosphorylase Kinase; domain 1 294 380 - -
Phac9g00023 566 SMART serkin_6 304 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00023 566 CDD STKc_MAP3K-like 310 553 - -
Phac9g00023 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00023 Phac-Chr9 208240 215806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00023 24 560 MAP Kinase Kinase Kinase AT4G35780 55.535 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phac9g00023 PK_Tyr_Ser-Thr 1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00023 - - vra:106761427 994.956