Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03888 ATGGGTTGCTGCCAATCGTCGATGCTGCTGAGAGTGGGGGAGAGAGAGACGCACCCTGAAAAGGAAAAGGAAAGGGAAAAGGAAAAGGAGAAGGAAAAGGAGAAAGACCAGGGTTACGGAACCCATCACAGGGCTTCTGCCGGAGGAGACTCTGGCGGTGACCCTGACAAAGAGGGGGTCGATTTCTCCTTCGCCGAGTTCTCGCTGCCGGAGCTCAAGGCGGCGACTAACAATTTCAGTTCAGAGTATATCGTCTCCGAGAGCGGCGAGAAGGCGCCCAACCTCGTCTACAAGGGTCGCCTCCACAACCAGAGCCGCTGGATTGCCGTCAAGAAGTTCAGCAAGGCTGCGTGGCCGGATCCCAAGCAGTTCGTCGAAGAAGCTTCCGGCGTTGGCAAGTTGCGCCACCCTAGGCTCGCTAATTTGATCGGTTACTGCTGCGACGGCGATGAGAGGCTCCTCGTTGCCGAGTACATGCCCAATGACACTCTCGCCAAGCATCTTTTCCACTGGGAAACTCAGACTATTGAGTGGGCCATGCGGTTGCGGGTGGCTCTGTACATCGCGCAGGCTTTGCATTATTGCAGTTCAGAGGGGCGTCCCCTGTACCACGACTTGAATGCTTACCGTGTTCTGTTCGACCAGGAAGGTGATCCTCGTCTCTCTTGTTTCGGATTCATGAAGAACAGCAGGGATGGGAAGAGTTATAGCACCAATCTTGCTTATACACCTCCTGAATATTTGAGAAACGGAAGGGTCACCCCTGAAAGTGTCATTTACAGCTTTGGAACTGTCCTTCTAGACCTCCTCAGTGGCAAGCACATCCCTCCCAGTCATGCACTTGATATGATACAGGGGAAGAACAATATGCTCTTAATGGATTCGCATTTGGAGGGAAAGTTTTCAACAGAAGAAGCTACAGTAGTTGTTAATCTTGCCTCCAAATGCTTGCAATATGAACCGAGGGAGCGGCCTGATACAAAGGATTTGGTCACAACACTTGCCCCATTGCATACAAAACCCGATGTTCGTTCTCACATCATGCTTGGAATTCCAAAGCACGAGGAAGCTCCATCAACCCCACAACGTCCTCTTTCAGCAATGGGAGAGGCCTGTTCAAGAATGGATCTAACTGCAATACATCAGATCTTGGTTGCGACACACTACAGAGATGATGAAGGAACCAATGAGCTGTCGTTCCAAGAGTGGACTCAGCAAATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAAGACTTCAAGACAGCCATTGATAACTATTCCCAGTTTATTGACGTGGGAACGATGGTCTCCCCAACTGTTTTTGCAAGACGCAGTCTGTGCTATCTGCTATGTGATCAACCAGATCCGGCGCTACGTGACGCCATGCAAGCACAGTGTGTTTATCCAGACTGGCCCACAGCTTTCTACATGCAATCAGTTGCTCTTGCAAAGCTTGACATGCACAAGGATGCAGCTGATATGCTAAATGAGGCAGCTGCATTGGAAGAGAAGAGACAAAGAGGAGCAAGATGA 1554 0.5051 MGCCQSSMLLRVGERETHPEKEKEREKEKEKEKEKDQGYGTHHRASAGGDSGGDPDKEGVDFSFAEFSLPELKAATNNFSSEYIVSESGEKAPNLVYKGRLHNQSRWIAVKKFSKAAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWETQTIEWAMRLRVALYIAQALHYCSSEGRPLYHDLNAYRVLFDQEGDPRLSCFGFMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPDVRSHIMLGIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAALEEKRQRGAR* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03888 517 FunFam probable serine/threonine-protein kinase At4g35230 55 158 - -
Phac8g03888 517 Gene3D Tetratricopeptide repeat domain 408 516 IPR011990 GO:0005515
Phac8g03888 517 MobiDBLite consensus disorder prediction 1 59 - -
Phac8g03888 517 ProSiteProfiles Protein kinase domain profile. 82 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03888 517 Pfam Protein kinase domain 95 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03888 517 FunFam probable serine/threonine-protein kinase At5g41260 160 351 - -
Phac8g03888 517 SUPERFAMILY TPR-like 411 512 IPR011990 GO:0005515
Phac8g03888 517 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 22 514 IPR045845 GO:0004672|GO:0009742
Phac8g03888 517 Gene3D Phosphorylase Kinase; domain 1 56 158 - -
Phac8g03888 517 MobiDBLite consensus disorder prediction 13 41 - -
Phac8g03888 517 Gene3D Transferase(Phosphotransferase) domain 1 160 351 - -
Phac8g03888 517 FunFam probable serine/threonine-protein kinase At4g35230 408 517 - -
Phac8g03888 517 SUPERFAMILY Protein kinase-like (PK-like) 63 338 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03888 Phac-Chr8 44801455 44808688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03888 50 358 Glycoside Hydrolase AT3G07070 34.337 4.72e-48 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Phac8g03888 Pkinase 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03888 K14500 - gmx:100808907 969.148