Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03871 ATGGGAAACTGCTGGCCTTCTCAGCCTCACGGCGGCGTAACCCCAACAACCACCGGTAACCTTAGCACAGCCACGCCGGAGACATCTCAGACCATCAGCAGCAGCACCACCAGCTTTACCACTAGCACAACCACAACTACTACTTCTGGAAGTGTGAACAGCTCCATGAATAGCACGTTCTCGGTCGCAAGCGGTGATCAACCTTATCCAACTGGGCAGATCTTACCCGCCTCCAATTTGAGGATTTTCTCCTTTGCTGACTTGAAGGCTGCAACTAGGAATTTCAGGGCTGATACAGTTCTTGGAGAGGGAGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAGAAGGGCAATTCCAAGAGTGGAACAGTCATTGCCGTCAAAAAACTCAACTCTGAAAGCTTACAAGGAATTGAGGAGTGGCGGTCCGAAGTAAACTTTCTAGGACGCCTTTCCCATCCTAATCTTGTTAAGCTATTGGGCTACTGTTTGGAGGAAACAGAGCTTCTTCTTGTATATGAATTCATGCAAAAAGGAAGTTTGGAAAACCATCTATTTGGAAGGGGTTCTGCCGTTCAACCACTTCCTTGGGATATCAGGCTTAAGATAGCAATTGGAGCAGCTCGTGGGCTTGCATTCTTGCATACATCCGAGAAAGTAATTTACAGAGACTTCAAGGCCTCAAATATATTGCTTGATGGGTCCTATAACGCTAAGATATCAGATTTTGGCTTGGCAAAGTTGGGTCCTTCAGCTAGTCAATCTCATGTCACAACAAGGGTGATGGGCACATACGGTTATGCAGCTCCTGAATATGTGGCCACAGGACATCTATATGTGAAGAGTGATGTATATGGGTTTGGAGTTGTTTTGGTGGAAATACTAACAGGGCTACGAGCACTTGATCCGAACCGTCCAAGTGGGCAACATAATCTAACAGACTGGGTGAAACCATACCTGCATGACAGAAGAAAGTTGAAGGGCGTTATGGATTCTCGATTGGAAGGAAAGTTTCCATCAAAAGCTGCATTTCGTATAGCTCAGCTTGCTTTGAAATGTCTTGCAACTGAGCCCAAACAGCGACCATCAATGAAGGAGGTATTGGAGAGTATGGAGCGAATTCAAGCTGCCAATGAGAAACCTGTGGAGCCTAAATCACGATCTACTCATACTCGTCAAGCCCACCTAGCTGTGCACCATCGTTCTCCGCTTAAAGACAGTACTTACTAA 1233 0.4615 MGNCWPSQPHGGVTPTTTGNLSTATPETSQTISSSTTSFTTSTTTTTTSGSVNSSMNSTFSVASGDQPYPTGQILPASNLRIFSFADLKAATRNFRADTVLGEGGFGKVFKGWLEEKGNSKSGTVIAVKKLNSESLQGIEEWRSEVNFLGRLSHPNLVKLLGYCLEETELLLVYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDPNRPSGQHNLTDWVKPYLHDRRKLKGVMDSRLEGKFPSKAAFRIAQLALKCLATEPKQRPSMKEVLESMERIQAANEKPVEPKSRSTHTRQAHLAVHHRSPLKDSTY* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03871 410 CDD STKc_IRAK 101 375 - -
Phac8g03871 410 Gene3D Phosphorylase Kinase; domain 1 79 176 - -
Phac8g03871 410 Gene3D Transferase(Phosphotransferase) domain 1 177 399 - -
Phac8g03871 410 MobiDBLite consensus disorder prediction 9 55 - -
Phac8g03871 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Phac8g03871 410 FunFam Serine/threonine-protein kinase PBS1 177 391 - -
Phac8g03871 410 MobiDBLite consensus disorder prediction 375 410 - -
Phac8g03871 410 PANTHER OS01G0588500 PROTEIN-RELATED 43 376 - -
Phac8g03871 410 MobiDBLite consensus disorder prediction 375 391 - -
Phac8g03871 410 ProSitePatterns Protein kinases ATP-binding region signature. 101 130 IPR017441 GO:0005524
Phac8g03871 410 ProSiteProfiles Protein kinase domain profile. 95 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03871 410 SUPERFAMILY Protein kinase-like (PK-like) 72 370 IPR011009 -
Phac8g03871 410 MobiDBLite consensus disorder prediction 1 55 - -
Phac8g03871 410 Pfam Protein tyrosine and serine/threonine kinase 98 371 IPR001245 GO:0004672|GO:0006468
Phac8g03871 410 FunFam Serine/threonine-protein kinase BIK1 63 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03871 Phac-Chr8 44727478 44730693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03871 76 380 Receptor kinase-like Gene Family AT4G02010 50.809 7.08e-102 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac8g03871 PK_Tyr_Ser-Thr 6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03871 - - vun:114194495 721.85