Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03869 ATGAATCTTCTATGCCTTGCATTAACATTGATCCTCCTATTGCATGGATCAAGAGCAAGAGAAGAAGCTTCCAGACATGACGATAGTGTCATCAAAATCGGTGCCATATTCACATTGAAAACTATAAGCGGACAAGTATCCAAAATTGCCATCCAAGCTGCTGAAAAGGATGTAAATTCCGATCCTCGCATCCTGGGGGGACGTAAATTGTCCATAAACTTCCATGATTCCAACTTCAGTGGTTTTCTTGGCTTCATTGGGGCTCTGAAGTTCTTGATGACTGACACAGTAGCCATAATCGGTCCACAAACTTCAGGAATGGCTCATGTGCTTTCGCATCTCGCAAATGAGCTCCATGTTCCCCTGCTCTCCTTCACTGCTCTGGATCCCACCCTAACACCTCTCCAGTATCCTTATTTTGTCCAAACAGCACCCAACGATCAGTTCCAGATGTCTGCAATTGCGGACATGATTAGTTATTATGGTTGGAGAGAGGTCATAGCAATATTCAGTGATGATGATCCTAGTCGAAATGGGGTAACTGTTTTGGGAGATAAACTTGCAGAGAGAAGCTGTAAGTTGTCCTACAAAGCAGCACTGCCTCCTGATCAAACTGCCACTCCAAGCTTTGTTACCACTCAGTTAGTGAAGATCAAGAGCATGGAGTCTCGAATAATCGTTCTACACACCTTCGCCAAAACTGGTCTCTTGGTTTTTGACATGGCTCAGAAACTAGGAATGATGACCAAAGGGTATGTCTGGATATCTACAACTTGGTTATCCACTGTTTTGGATTCAGCTTCTGCTCCACTACCTTCAAACGTTTCTACCTCAATTCTAGGAGTTCTTACCCTTCGCCCTCACACCCCCCAATCCATAAAAAAACAGGCTTTTATCTCAAGGTGGAAACACATAAGCAATGGCTCAATTGGGTTAAATCCATACGGACTCTATGCGTATGATTCTGTGTGGACGATTGCTGAGGCACTAAACTTGTTTTTTGCTCAGAAGGGAACGGTTTCATTTTCCAAGAACACAAATTTAAGCAGTACTGGGGAAGAGACTCTGGATCTGGGTGCTTTGAGTGTTTTTGATGGAGGGAAGCAACTTCTTGATACCATATTGCGCATTAACATCACTGGATTAACTGGGCCTATTCACTTTGCTTCGGATCGATCTCTTCCACATCCATCATATGACATCATTAATGTGATTGCTACAGGTTTTCGGAGCATTGGTTACTGGTCTAATTACTCTGGGCTGTCAGTGATAACTCCTGAGAAACTTCAGTTGAAGCCTGCAAATCGTTCGATTTCAAGCCAGCATCTGAAGCATGTGATATGGCCTGGAAATACTCTAGAAAAGCCTCGTGGATGGGTTTTCCCAAACAATGGGAGGCAACTGAGAATTGGAGTTCCCAACAGGATCAGTTATAGAGCCATAGTCTCACAGATAAATGGCTCCAATGCAGTTCAAGGATATTGCATAGATATATTCCTAGCTGCCATAAAACTTCTTCCATATGCAGTTCAGTATGAGTTCGTTCTGTTTGGAGATGGAAAAAACAACCCAAGCTACTATGATCTTGTCAACATGATTGCTTCTGATGTTTTCGATGCTGCTGTGGGTGACATTGCTATTGTCACTGACCGAACAAAGATTGCGGATTTTACTCAACCATATATAGAATCTGGGCTAGTTGTGGTTGCTCCGGTAAACAAATTGAAGTCACATGCTTGGGCTTTCTTGCGACCATTTACTCCAATGATGTGGGGTGTTACTGCATTTTTTTTCCTTTTTGTTGGAGCAGTGGTGTGGATTCTTGAACATAGAACGAACGATGAGTTTCGGGGGCTGCCAAAGGAACAGATAGTTACAGTTCTTTGGTTTAGTCTCTCAACCATGTTCTTTGCGCACAGAGAAAACACAGTTAGTCCACTTGGTCGAATTGTGCTGATAATCTGGCTTTTTGTGGTTCTGATAATCAATTCAAGCTACACTGCAAGCTTGACATCAATTCTGACAGTGCAGCAGCTGTCTTCACCCATAACAGGAATTGATAGCTTGATGTCCAGCAGTGAACGTATAGGGTTCCAAGTAGGGTCGTTTGCTGCAAACTATCTAACTGAGCAACTCAACATCCCCAAACATAGACTTGTTCCTCTTGGCTCGCCAGAAGAATATGTCATTGCCCTTGAAAGAGGGACAGTTGCAGCTGTGGTGGATGAACGCCCATATGTAGAACTCTTCCTTTCAAACCACTGCAAATTCTCAATCAGGGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGTGAGTATCTTCTGCATTGGTATAAAGTGA 2343 0.4324 MNLLCLALTLILLLHGSRAREEASRHDDSVIKIGAIFTLKTISGQVSKIAIQAAEKDVNSDPRILGGRKLSINFHDSNFSGFLGFIGALKFLMTDTVAIIGPQTSGMAHVLSHLANELHVPLLSFTALDPTLTPLQYPYFVQTAPNDQFQMSAIADMISYYGWREVIAIFSDDDPSRNGVTVLGDKLAERSCKLSYKAALPPDQTATPSFVTTQLVKIKSMESRIIVLHTFAKTGLLVFDMAQKLGMMTKGYVWISTTWLSTVLDSASAPLPSNVSTSILGVLTLRPHTPQSIKKQAFISRWKHISNGSIGLNPYGLYAYDSVWTIAEALNLFFAQKGTVSFSKNTNLSSTGEETLDLGALSVFDGGKQLLDTILRINITGLTGPIHFASDRSLPHPSYDIINVIATGFRSIGYWSNYSGLSVITPEKLQLKPANRSISSQHLKHVIWPGNTLEKPRGWVFPNNGRQLRIGVPNRISYRAIVSQINGSNAVQGYCIDIFLAAIKLLPYAVQYEFVLFGDGKNNPSYYDLVNMIASDVFDAAVGDIAIVTDRTKIADFTQPYIESGLVVVAPVNKLKSHAWAFLRPFTPMMWGVTAFFFLFVGAVVWILEHRTNDEFRGLPKEQIVTVLWFSLSTMFFAHRENTVSPLGRIVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIDSLMSSSERIGFQVGSFAANYLTEQLNIPKHRLVPLGSPEEYVIALERGTVAAVVDERPYVELFLSNHCKFSIRGQEFTKSGWGFVSIFCIGIK* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03869 780 FunFam Glutamate receptor 146 307 - -
Phac8g03869 780 Gene3D - 49 396 - -
Phac8g03869 780 Gene3D - 579 714 - -
Phac8g03869 780 Pfam Receptor family ligand binding region 49 404 IPR001828 -
Phac8g03869 780 FunFam Glutamate receptor 734 769 - -
Phac8g03869 780 Gene3D - 453 578 - -
Phac8g03869 780 SUPERFAMILY Periplasmic binding protein-like II 445 772 - -
Phac8g03869 780 Pfam Bacterial extracellular solute-binding proteins, family 3 486 754 IPR001638 -
Phac8g03869 780 PIRSF IGluLR_plant 1 775 IPR017103 -
Phac8g03869 780 SUPERFAMILY Periplasmic binding protein-like I 28 460 IPR028082 -
Phac8g03869 780 CDD PBP1_GABAb_receptor_plant 32 423 IPR044440 -
Phac8g03869 780 Gene3D - 146 421 - -
Phac8g03869 780 FunFam Glutamate receptor 579 709 - -
Phac8g03869 780 SMART GluR_14 469 773 IPR001320 GO:0015276|GO:0016020
Phac8g03869 780 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 772 IPR015683 -
Phac8g03869 780 Pfam Ligand-gated ion channel 590 726 IPR001320 GO:0015276|GO:0016020
Phac8g03869 780 FunFam Glutamate receptor 463 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03869 Phac-Chr8 44710559 44713981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03869 5 776 Ion Channels AT4G35290 63.953 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03869 K05387 - gmx:100793969 1317.37