Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03868 ATGAATCTTCTATGCCTTGCATTAACATTGATCCTCCTATTGCATGGATCAAGAGCAAGAGAAGAAGCTTCCAGACATGACGATAGTGTCATCAAAATCGGTGCCATATTCACATTGAAAACTATAAGCGGACAAGTATCCAAAATTGCCATCCAAGCTGCTGAAAAGGATGTAAATTCCGATCCTCGCATCCTGGGGGGACGTAAATTGTCCATAAACTTCCATGATTCCAACTTCAGTGGTTTTCTTGGCTTCATTGGGGCTCTGAAGTTCTTGATGACTGACACAGTAGCCATAATCGGTCCACAAACTTCAGGAATGGCTCATGTGCTTTCGCATCTCGCAAATGAGCTCCATGTTCCCCTGCTCTCCTTCACTGCTCTGGATCCCACCCTAACACCTCTCCAGTATCCTTATTTTGTCCAAACAGCACCCAACGATCAGTTCCAGATGTCTGCAATTGCGGACATGATTAGTTATTATGGTTGGAGAGAGGTCATAGCAATATTCAGTGATGATGATCCTAGTCGAAATGGGGTAACTGTTTTGGGAGATAAACTTGCAGAGAGAAGCTGTAAGTTGTCCTACAAAGCAGCACTGCCTCCTGATCAAACTGCCACTCCAAGCTTTGTTACCACTCAGTTAGTGAAGATCAAGAGCATGGAGTCTCGAATAATCGTTCTACACACCTTCGCCAAAACTGGTCTCTTGGTTTTTGACATGGCTCAGAAACTAGGAATGATGACCAAAGGGTATGTCTGGATATCTACAACTTGGTTATCCACTGTTTTGGATTCAGCTTCTGCTCCACTACCTTCAAACGTTTCTACCTCAATTCTAGGAGTTCTTACCCTTCGCCCTCACACCCCCCAATCCATAAAAAAACAGGCTTTTATCTCAAGGTGGAAACACATAAGCAATGGCTCAATTGGGTTAAATCCATACGGACTCTATGCGTATGATTCTGTGTGGACGATTGCTGAGGCACTAAACTTGTTTTTTGCTCAGAAGGGAACGGTTTCATTTTCCAAGAACACAAATTTAAGCAGTACTGGGGAAGAGACTCTGGATCTGGGTGCTTTGAGTGTTTTTGATGGAGGGAAGCAACTTCTTGATACCATATTGCGCATTAACATCACTGGATTAACTGGGCCTATTCACTTTGCTTCGGATCGATCTCTTCCACATCCATCATATGACATCATTAATGTGATTGCTACAGGTTTTCGGAGCATTGGTTACTGGTCTAATTACTCTGGGCTGTCAGTGATAACTCCTGAGAAACTTCAGTTGAAGCCTGCAAATCGTTCGATTTCAAGCCAGCATCTGAAGCATGTGATATGGCCTGGAAATACTCTAGAAAAGCCTCGTGGATGGGTTTTCCCAAACAATGGGAGGCAACTGAGAATTGGAGTTCCCAACAGGATCAGTTATAGAGCCATAGTCTCACAGATAAATGGCTCCAATGCAGTTCAAGGATATTGCATAGATATATTCCTAGCTGCCATAAAACTTCTTCCATATGCAGTTCAGTATGAGTTCGTTCTGTTTGGAGATGGAAAAAACAACCCAAGCTACTATGATCTTGTCAACATGATTGCTTCTGATGTTTTCGATGCTGCTGTGGGTGACATTGCTATTGTCACTGACCGAACAAAGATTGCGGATTTTACTCAACCATATATAGAATCTGGGCTAGTTGTGGTTGCTCCGGTAAACAAATTGAAGTCACATGCTTGGGCTTTCTTGCGACCATTTACTCCAATGATGTGGGGTGTTACTGCATTTTTTTTCCTTTTTGTTGGAGCAGTGGTGTGGATTCTTGAACATAGAACGAACGATGAGTTTCGGGGGCTGCCAAAGGAACAGATAGTTACAGTTCTTTGGTTTAGTCTCTCAACCATGTTCTTTGCGCACAGTAAGTTCACCCATTTTGGCAGTTATTGTCGTATTCGAGAAACATGTTCTGGTTTATCTTTGTTGGTAGAAACAAATAAGGTTCTTTGTTATTTCAGGAGAAAACACAGTTAG 2031 0.4259 MNLLCLALTLILLLHGSRAREEASRHDDSVIKIGAIFTLKTISGQVSKIAIQAAEKDVNSDPRILGGRKLSINFHDSNFSGFLGFIGALKFLMTDTVAIIGPQTSGMAHVLSHLANELHVPLLSFTALDPTLTPLQYPYFVQTAPNDQFQMSAIADMISYYGWREVIAIFSDDDPSRNGVTVLGDKLAERSCKLSYKAALPPDQTATPSFVTTQLVKIKSMESRIIVLHTFAKTGLLVFDMAQKLGMMTKGYVWISTTWLSTVLDSASAPLPSNVSTSILGVLTLRPHTPQSIKKQAFISRWKHISNGSIGLNPYGLYAYDSVWTIAEALNLFFAQKGTVSFSKNTNLSSTGEETLDLGALSVFDGGKQLLDTILRINITGLTGPIHFASDRSLPHPSYDIINVIATGFRSIGYWSNYSGLSVITPEKLQLKPANRSISSQHLKHVIWPGNTLEKPRGWVFPNNGRQLRIGVPNRISYRAIVSQINGSNAVQGYCIDIFLAAIKLLPYAVQYEFVLFGDGKNNPSYYDLVNMIASDVFDAAVGDIAIVTDRTKIADFTQPYIESGLVVVAPVNKLKSHAWAFLRPFTPMMWGVTAFFFLFVGAVVWILEHRTNDEFRGLPKEQIVTVLWFSLSTMFFAHSKFTHFGSYCRIRETCSGLSLLVETNKVLCYFRRKHS* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03868 676 SUPERFAMILY Periplasmic binding protein-like II 445 593 - -
Phac8g03868 676 SMART GluR_14 469 675 IPR001320 GO:0015276|GO:0016020
Phac8g03868 676 Gene3D - 146 421 - -
Phac8g03868 676 FunFam Glutamate receptor 146 307 - -
Phac8g03868 676 FunFam Glutamate receptor 463 579 - -
Phac8g03868 676 Pfam Receptor family ligand binding region 49 405 IPR001828 -
Phac8g03868 676 CDD PBP1_GABAb_receptor_plant 32 423 IPR044440 -
Phac8g03868 676 Gene3D - 49 396 - -
Phac8g03868 676 Gene3D - 453 578 - -
Phac8g03868 676 Gene3D - 579 661 - -
Phac8g03868 676 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 634 IPR015683 -
Phac8g03868 676 SUPERFAMILY Periplasmic binding protein-like I 28 460 IPR028082 -
Phac8g03868 676 Pfam Ligated ion channel L-glutamate- and glycine-binding site 484 570 IPR019594 GO:0004970|GO:0016020
Phac8g03868 676 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 104 132 - -
Phac8g03868 676 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 319 331 - -
Phac8g03868 676 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 44 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03868 Phac-Chr8 44710559 44713981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03868 5 643 Ion Channels AT4G35290 61.310 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03868 K05387 - gmx:100793969 1072.38