Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03864 ATGAATCTTCTATGCCTTGCATTAACATTGATCCTCCTATTGCATGGATCAAGAGCAAGAGAAGAAGCTTCCAGACATGACGATAGTGTCATCAAAATCGGTGCCATATTCACATTGAAAACTATAAGCGGACAAGTATCCAAAATTGCCATCCAAGCTGCTGAAAAGGATGTAAATTCCGATCCTCGCATCCTGGGGGGACGTAAATTGTCCATAAACTTCCATGATTCCAACTTCAGTGGTTTTCTTGGCTTCATTGGGGCTCTGAAGTTCTTGATGACTGACACAGTAGCCATAATCGGTCCACAAACTTCAGGAATGGCTCATGTGCTTTCGCATCTCGCAAATGAGCTCCATGTTCCCCTGCTCTCCTTCACTGCTCTGGATCCCACCCTAACACCTCTCCAGTATCCTTATTTTGTCCAAACAGCACCCAACGATCAGTTCCAGATGTCTGCAATTGCGGACATGATTAGTTATTATGGTTGGAGAGAGGTCATAGCAATATTCAGTGATGATGATCCTAGTCGAAATGGGGTAACTGTTTTGGGAGATAAACTTGCAGAGAGAAGCTGTAAGTTGTCCTACAAAGCAGCACTGCCTCCTGATCAAACTGCCACTCCAAGCTTTGTTACCACTCAGTTAGTGAAGATCAAGAGCATGGAGTCTCGAATAATCGTTCTACACACCTTCGCCAAAACTGGTCTCTTGGTTTTTGACATGGCTCAGAAACTAGGAATGATGACCAAAGGGTATGTCTGGATATCTACAACTTGGTTATCCACTGTTTTGGATTCAGCTTCTGCTCCACTACCTTCAAACGTTTCTACCTCAATTCTAGGAGTTCTTACCCTTCGCCCTCACACCCCCCAATCCATAAAAAAACAGGCTTTTATCTCAAGGTGGAAACACATAAGCAATGGCTCAATTGGGTTAAATCCATACGGACTCTATGCGTATGATTCTGTGTGGACGATTGCTGAGGCACTAAACTTGTTTTTTGCTCAGAAGGGAACGGTTTCATTTTCCAAGAACACAAATTTAAGCAGTACTGGGGAAGAGACTCTGGATCTGGGTGCTTTGAGTGTTTTTGATGGAGGGAAGCAACTTCTTGATACCATATTGCGCATTAACATCACTGGATTAACTGGGCCTATTCACTTTGCTTCGGATCGATCTCTTCCACATCCATCATATGACATCATTAATGTGATTGCTACAGGTTTTCGGAGCATTGGTTACTGGTCTAATTACTCTGGGCTGTCAGTGATAACTCCTGAGAAACTTCAGTTGAAGCCTGCAAATCGTTCGATTTCAAGCCAGCATCTGAAGCATGTGATATGGCCTGGAAATACTCTAGAAAAGCCTCGTGGATGGGTTTTCCCAAACAATGGGAGGCAACTGAGAATTGGAGTTCCCAACAGGATCAGTTATAGAGCCATAGTCTCACAGATAAATGGCTCCAATGCAGTTCAAGGATATTGCATAGATATATTCCTAGCTGCCATAAAACTTCTTCCATATGCAGTTCAGTATGAGTTCGTTCTGTTTGGAGATGGAAAAAACAACCCAAGCTACTATGATCTTGTCAACATGATTGCTTCTGATGTTTTCGATGCTGCTGTGGGTGACATTGCTATTGTCACTGACCGAACAAAGATTGCGGATTTTACTCAACCATATATAGAATCTGGGCTAGTTGTGGTTGCTCCGGTAAACAAATTGAAGTCACATGCTTGGGCTTTCTTGCGACCATTTACTCCAATGATGTGGGGTGTTACTGCATTTTTTTTCCTTTTTGTTGGAGCAGTGGTGTGGATTCTTGAACATAGAACGAACGATGAGTTTCGGGGGCTGCCAAAGGAACAGATAGTTACAGTTCTTTGGTTTAGTCTCTCAACCATGTTCTTTGCGCACAGAGAAAACACAGTTAGTCCACTTGGTCGAATTGTGCTGATAATCTGGCTTTTTGTGGTTCTGATAATCAATTCAAGCTACACTGCAAGCTTGACATCAATTCTGACAGTGCAGCAGCTGTCTTCACCCATAACAGGAATTGATAGCTTGATGTCCAGCAGTGAACGTATAGGGTTCCAAGTAGGGTCGTTTGCTGCAAACTATCTAACTGAGCAACTCAACATCCCCAAACATAGACTTGTTCCTCTTGGCTCGCCAGAAGAATATGTCATTGCCCTTGAAAGAGGGACAGTTGCAGCTGTGGTGGATGAACGCCCATATGTAGAACTCTTCCTTTCAAACCACTGCAAATTCTCAATCAGGGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCATTTCCGAGGGACTCTCCTTTTGCAGTTGATATGTCAACGGCGATTCTAACTTTATCTGAGAACGGTGAACTTCAGAGGATCCATGAAAAGTGGCTTTCAGAAAAGGCCTGTGCTCATCACAGCACTGAGGATGAACAGCTTCAGTTAAATAGCTTCCGAGGCTTGTTTCTAATATGTGGAATAACATGTTTCGTGGCGCTTCTCATATACTTTTTATCAATGATACACCAATTCAGCAAAAAGTCCCCTGAAAAAGTTGGTCCTTCGAATCGTTACAGTTCGCGTTCTGCACGTATTCAAACATTTCTGGATTTTGTGGACGAGAAAGAAGACGTATCTCCGAGGAAATTAAAGAGAAAACTGGAATACATTTCATCAAATCGTTTGAGGAGCATTTCAAAGAACAGGAGTCAGAAAGTGGACATTTCCTAA 2748 0.429 MNLLCLALTLILLLHGSRAREEASRHDDSVIKIGAIFTLKTISGQVSKIAIQAAEKDVNSDPRILGGRKLSINFHDSNFSGFLGFIGALKFLMTDTVAIIGPQTSGMAHVLSHLANELHVPLLSFTALDPTLTPLQYPYFVQTAPNDQFQMSAIADMISYYGWREVIAIFSDDDPSRNGVTVLGDKLAERSCKLSYKAALPPDQTATPSFVTTQLVKIKSMESRIIVLHTFAKTGLLVFDMAQKLGMMTKGYVWISTTWLSTVLDSASAPLPSNVSTSILGVLTLRPHTPQSIKKQAFISRWKHISNGSIGLNPYGLYAYDSVWTIAEALNLFFAQKGTVSFSKNTNLSSTGEETLDLGALSVFDGGKQLLDTILRINITGLTGPIHFASDRSLPHPSYDIINVIATGFRSIGYWSNYSGLSVITPEKLQLKPANRSISSQHLKHVIWPGNTLEKPRGWVFPNNGRQLRIGVPNRISYRAIVSQINGSNAVQGYCIDIFLAAIKLLPYAVQYEFVLFGDGKNNPSYYDLVNMIASDVFDAAVGDIAIVTDRTKIADFTQPYIESGLVVVAPVNKLKSHAWAFLRPFTPMMWGVTAFFFLFVGAVVWILEHRTNDEFRGLPKEQIVTVLWFSLSTMFFAHRENTVSPLGRIVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIDSLMSSSERIGFQVGSFAANYLTEQLNIPKHRLVPLGSPEEYVIALERGTVAAVVDERPYVELFLSNHCKFSIRGQEFTKSGWGFAFPRDSPFAVDMSTAILTLSENGELQRIHEKWLSEKACAHHSTEDEQLQLNSFRGLFLICGITCFVALLIYFLSMIHQFSKKSPEKVGPSNRYSSRSARIQTFLDFVDEKEDVSPRKLKRKLEYISSNRLRSISKNRSQKVDIS* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03864 915 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 867 IPR015683 -
Phac8g03864 915 Pfam Bacterial extracellular solute-binding proteins, family 3 486 805 IPR001638 -
Phac8g03864 915 Gene3D - 579 711 - -
Phac8g03864 915 Gene3D - 146 421 - -
Phac8g03864 915 FunFam Glutamate receptor 146 307 - -
Phac8g03864 915 SUPERFAMILY Periplasmic binding protein-like I 28 460 IPR028082 -
Phac8g03864 915 Pfam Receptor family ligand binding region 49 404 IPR001828 -
Phac8g03864 915 Gene3D - 453 578 - -
Phac8g03864 915 Gene3D - 767 803 - -
Phac8g03864 915 CDD GluR_Plant 466 804 - -
Phac8g03864 915 CDD PBP1_GABAb_receptor_plant 32 423 IPR044440 -
Phac8g03864 915 Gene3D - 739 766 - -
Phac8g03864 915 FunFam Glutamate receptor 579 709 - -
Phac8g03864 915 Pfam Ligand-gated ion channel 806 834 IPR001320 GO:0015276|GO:0016020
Phac8g03864 915 SMART GluR_14 469 806 IPR001320 GO:0015276|GO:0016020
Phac8g03864 915 FunFam Glutamate receptor 705 808 - -
Phac8g03864 915 PIRSF IGluLR_plant 1 913 IPR017103 -
Phac8g03864 915 Gene3D - 49 396 - -
Phac8g03864 915 FunFam Glutamate receptor 463 579 - -
Phac8g03864 915 SUPERFAMILY Periplasmic binding protein-like II 445 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03864 Phac-Chr8 44709498 44713981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03864 1 892 Ion Channels AT2G17260 61.878 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03864 K05387 - gmx:100793969 1310.82