Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03851 ATGGTTTCTTCAGACAAAAGTGTAGATCAAAATATCCCTTCTGATAAATTGCAGCATAGAGCGAGTCCTGATAGTGATGTTACATTGTCACAAGGTCATGATACTAAAAATGATCTGTCCAAACCAGAGGGAGCAACAAGTACTCCTTCTGTTGTAGCTAAAAATGAAGAGGGGAAGGATTCTGATGCTACTGCTTGTGCCCTGGAATCAGATCAAGAAGGGAGCACGTGCTCATTACCACTTGAGAAACATTTGCAGAGCCCTGATACCCTTTTGAATGCATTGCCTCCATTGCAATCCAGTCTGGAAAGTCCCTCTGTAATACGTGAAAAGGTATCTAAAGATGGCTATAACTGGCGAAAATATGGTCAGAAACACGTCAAGGGGAATGAATTTATACGGAGCTATTACAAGTGTACATATCCAAATTGCCAGGCAAAAAAGCAGTTGCAGCAGTCTAATAATGGGAATATCACAGATTGTGTTTCTATCGGACAGCATAATCATCCTAGGCCTCAATTGAACTCCACAGTATCAGTTGAATGTGTTTTGCCGGTTGTGGAACAAGCAGCACGCAAGCCCTTGTTAGCCAATGTGAAAGACAAAACATCCGTTGAGCAAGGATGCATTCCTCAACAGATCAAGCCTTTACAGTCCCTTCCACCTACACAAGTGTCCCCAGTCAATGAGTTGAAAGCTGCACATTCACAATTGTCTAAGGCAAGGAATCAGGTTCATGACAACGAGGATCCCGAGTCAAAGCGACTGAAGAAAGACAATAGTAATGCGGATACCACTGGAGTTAACATGTCAACTCGTGAATCTCGTATTGTTGTTCAGACTTCAAGTGAGGTTGATTTAGTAAATGATGGGTATCGCTGGCGCAAATATGGGCAGAAGCTTGTTAAAGGGAATGCAAACCCAAGAAGTTATTACCGATGCTCAAATCCTGGATGCCCTGTCAAAAAGCACGTGGAAAGGGCCTCTCATGATTCAAAAATTGTAATAACTACCTATGAGGGACAACATGATCATGAACTTCCCCCTGGAAGGACTGTCACTCATAATGCAGCTACAAATATGCACTCAACAACCATGAATGGCAAGGCAGGAACCAAATCTGAAGATACTGTTAATAGAGGGGAACAAAGTGGCTTGGACTCACCAAGCAAATTAACAGAGAAACTAAATGGCAAGTCAACTACTAAGTCAAAGGTCGATGATATGGTCGACTTCGATGGGATCAGCCTTTCTAATGAGGGTCCTGAAATTAAATTAAAGGAGCAACAACAAAAAGATAACTCAGGTACTAAAGACGATTGTGTCAGCAATGATGTTGTATGCCATTCTAGTTCTGGAGTTCTGTGTAAATCAAATGAACAGCTGAAAGGTGAGGTAAAACCTTTATCAGAAGGAACTAAGGATTGCCTTAGCAAGGTTGCCATTCATGATACCCCCAGTACAGAAAGCGAATATAATAAGCAATCAGCACCTGATGCAGAACCGGTCCAAAGCTAA 1518 0.4203 MVSSDKSVDQNIPSDKLQHRASPDSDVTLSQGHDTKNDLSKPEGATSTPSVVAKNEEGKDSDATACALESDQEGSTCSLPLEKHLQSPDTLLNALPPLQSSLESPSVIREKVSKDGYNWRKYGQKHVKGNEFIRSYYKCTYPNCQAKKQLQQSNNGNITDCVSIGQHNHPRPQLNSTVSVECVLPVVEQAARKPLLANVKDKTSVEQGCIPQQIKPLQSLPPTQVSPVNELKAAHSQLSKARNQVHDNEDPESKRLKKDNSNADTTGVNMSTRESRIVVQTSSEVDLVNDGYRWRKYGQKLVKGNANPRSYYRCSNPGCPVKKHVERASHDSKIVITTYEGQHDHELPPGRTVTHNAATNMHSTTMNGKAGTKSEDTVNRGEQSGLDSPSKLTEKLNGKSTTKSKVDDMVDFDGISLSNEGPEIKLKEQQQKDNSGTKDDCVSNDVVCHSSSGVLCKSNEQLKGEVKPLSEGTKDCLSKVAIHDTPSTESEYNKQSAPDAEPVQS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03851 505 MobiDBLite consensus disorder prediction 1 69 - -
Phac8g03851 505 Pfam WRKY DNA -binding domain 114 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03851 505 Pfam WRKY DNA -binding domain 289 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03851 505 SMART WRKY_cls 113 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03851 505 SMART WRKY_cls 288 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03851 505 MobiDBLite consensus disorder prediction 1 54 - -
Phac8g03851 505 MobiDBLite consensus disorder prediction 242 261 - -
Phac8g03851 505 Gene3D WRKY domain 275 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03851 505 MobiDBLite consensus disorder prediction 481 505 - -
Phac8g03851 505 FunFam WRKY transcription factor 57 274 348 - -
Phac8g03851 505 MobiDBLite consensus disorder prediction 362 397 - -
Phac8g03851 505 MobiDBLite consensus disorder prediction 362 443 - -
Phac8g03851 505 MobiDBLite consensus disorder prediction 483 505 - -
Phac8g03851 505 SUPERFAMILY WRKY DNA-binding domain 109 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03851 505 MobiDBLite consensus disorder prediction 425 439 - -
Phac8g03851 505 FunFam WRKY transcription factor 103 173 - -
Phac8g03851 505 MobiDBLite consensus disorder prediction 232 268 - -
Phac8g03851 505 SUPERFAMILY WRKY DNA-binding domain 280 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03851 505 ProSiteProfiles WRKY domain profile. 108 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03851 505 Gene3D WRKY domain 102 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03851 505 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 65 366 IPR044810 GO:0003700
Phac8g03851 505 ProSiteProfiles WRKY domain profile. 283 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03851 Phac-Chr8 44330150 44334155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03851 98 371 WRKY Transcription Factor Family AT2G04880 50.714 5.32e-86 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g03851 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03851 K18834 - gmx:100781219 837.025