Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03848 ATGCAGGCATCAGAGCAACATAGAAGTTCAAGCATGTACTATCAACCATTACAACAAATTGAAGCCTACTGTTTGCCGCAGTATAGGAGTGTAAATCAACAGCTATACTACCATGATGGAGGCCATGGAACTCACTTTTCAACTCCAAGTTCTTCTGAACTTTACTGTACATTGGAGTCATCTTCTGTAGCCGGCAGTTTCACCCTTTACAACTCCCCTTCAACTGTTAACTTCTCACCGAATGGTAGCCCCATATCTCAGCAAGACTCTCACTCATATCCACCTGACCAGTATCATTCCCCTGAGAATACCTACGGCTCTCCATTGAGTGGCTCCTGCATAACCGATGATTTAAGCAACTTCAAGCACAAACTGAGAGAGTTGGAAAGTATAATGCTTGGCCCTGACTCTGATAATCTTGATAGTTATGACAGTGCCATAAGCAATGGAAACAACTTTGCTTCACCTGAGATGGACAGTTGGAGACAAACAATGGTGGCAATTTCTAGCAAAAACCTGAAGCATATCCTTGTTGCATGTGCCAAAGCCATTGCAGACAATGATTTACTCATGGCACAGTGGCTGATGGATGAATTAAGGCAGATGGTGTCAGTTTCTGGCGACCCAATTCAACGATTGGGAGCATACATGCTGGAAGGACTAGTTGCACGATTGGCTGCTTCTGGGAGTTCAATATACAAAGCTTTAAGATGCAAAGAACCAGAAAGTGCTGAGCTTCTCTCCTACATGCACATACTATATGAGGTTTGCCCCTACTTCAAATTTGGATACATGTCTGCAAATGGAGCCATTGCAGAAGCTATGAAAGATGAAGACAGGGTGCACATAGTTGATTTCCAAATTGGTCAAGGAAGCCAGTGGATCACTTTAATTCAGGCTTTTGCAGCTAGACCTGGAGGGCCACCCCACATTCGGATTACAGGTATTGATGACTCACAATCAGCTTATGCCCGGGGTGGTGGACTGCACATAGTGGGAAGGAGGTTATCAAAGCTTGCTGAGCATTTTAAGGTGCCGTTTGAATTTCATGCTGCAGCTATCTCTGGTTGTGATGTTCAAGTACATAACCTTGGAGTTCGACCGGGGGAAGCTCTGGCTGTGAATTTTGCCTTCATGCTACATCACATGCCAGATGAAAGTGTGAGTACTCAGAATCACAGGGACAGGCTGTTGAGGTTGGTTAGGAGCCTATCTCCAAAGGTGGTGACACTTGTGGAGCAGGAATCTAACACAAACACTGCTGCATTCTTTCCACGTTTCCTTGAAACTCTGGACTATTACACAGCAATGTTTGAGTCAATAGATGTGACTCTTCCCAGAGATCATAAAGAGAGAATCAATGTGGAGCAGCATTGTTTGGCAAGAGATTTGGTTAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAACGGCATGAGGTGCTTGGGAAGTGGAGGTCAAGATTTGCAATGGCCGGTTTCACTCCTTACCCTTTGAGTTCACTGGTGAATGGTACCATTAAGAAATTGCTTGAGAACTACAGTAATAGATATAGACTTGAAGAGAGAGATGGAGCTCTTTATCTGGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCATGGAAATGA 1632 0.443 MQASEQHRSSSMYYQPLQQIEAYCLPQYRSVNQQLYYHDGGHGTHFSTPSSSELYCTLESSSVAGSFTLYNSPSTVNFSPNGSPISQQDSHSYPPDQYHSPENTYGSPLSGSCITDDLSNFKHKLRELESIMLGPDSDNLDSYDSAISNGNNFASPEMDSWRQTMVAISSKNLKHILVACAKAIADNDLLMAQWLMDELRQMVSVSGDPIQRLGAYMLEGLVARLAASGSSIYKALRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIVDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSQSAYARGGGLHIVGRRLSKLAEHFKVPFEFHAAAISGCDVQVHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVRSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFESIDVTLPRDHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSNRYRLEERDGALYLGWMNRDLVASCAWK* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03848 543 ProSiteProfiles GRAS family profile. 164 543 IPR005202 -
Phac8g03848 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 149 537 IPR005202 -
Phac8g03848 543 Pfam GRAS domain family 173 543 IPR005202 -
Phac8g03848 543 MobiDBLite consensus disorder prediction 79 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03848 Phac-Chr8 44325630 44329315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03848 12 543 GRAS Transcription Factor Family AT5G48150 66.543 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac8g03848 GRAS 5.3e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03848 - - gmx:100808300 1046.19