Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03845 ATGTCTGTGAATCGAAAGCCTCCAGCTTCGAATGGTAGATTACCATCGAATATGAAGTCTTGGAAGGTGAATGAGCCTCTGCATGGGTCTAATTCTTCCAGGACATGTAGGAGAAAACCCTTGCTCCTTTGGTTCTTTGGCTTTGTTGCCGTAGGGAGTATTTGGTTTATCTTGAGCTTCAATAGTAGCTATTTGGTGAACAAGGAGAATGAAGCAATTTGTGAAAAAAGAGCAAGAATGTTGCTACACCGTTACAATGTTAGTAGGGAACAGATTTATGCTTTGACCTCCTTGTTCCCTGGATCAGATCAGATTTTGTTCAACTGTATTGATGAAAGAAGACTTCGGATGCTGTTAAGGAGTGGCATGGTCAGCACTCCACAGTTAATGTGTCCAGAGAATGAGGAGTCAAAAAAGGAGCGTATATGTGTAGCAGACACTGTAGAACCTATCGAACAATGTCCAATTCTCAATGATTATGTCCAGAACATTGTGCAACCGTTGGAACTGAGGGTATCTGCAATTTGGGGTCATGTGAATTCATCTAATTTAACTAAAGGATTCTGGTGGGTCCTTATTGGAATTGTAATGTCCTACTTCTGTTTACTATGGAGGAGTCAAAAGCAGAAGCTAGTTCAGGGGCATCCAGCTGCACAACAAAAGCGGCTGAAGCATTTTGCTCGGGGTCCTTCAAGGGGTGCTGGGAGGTGGAGGAAAAAGTTACTAGTTATATTTGTGTCACTTGGAATATTTGGGTCCTTTTGGTTATTTTGGCACCTAAATATGGACATCATGCAGAGAAGAGAAGAAATGCTAACCAATATGTGTGATGAGAGAGCCCGTATGCTGCAAGATCAGTTTAATGTGAGCATGAACCATGTTCATGCTCTGGCTATCCTTGTATCTACATTTCACCATGATAAACATCCTTCTGCAATCGACCAGAAAATTTTTGGAGAATATACCGAGAGTACAGCATTTGAAAGACCACTTACTAGTGGTGTTGCTTATGCTTTGAAAGTTCTTCATTCAGATAGGATGCATTTTGAGAAACAGCATGGGTGGACAATTAAGAAAATGGAAACAGAGAATGAGGCATTAGTCCAAGATTGCATTCCCGGAAATTTGGATCCAGCACCCATTCAAGATGAATATGCACCAGTGATATTTGCTCAAGAAACAGTTTCCCATATTGTATCTATTGACATGATGTCAGGGAAGGAGGACCGTGAGAATATTCTGCGAGCAAGGGCATCTGGAAAGGGGGTTCTCACATCCCCTTTTAAACTACTAAAGTCCAATCACCTGGGTGTTGTACTTACATTTGCTGTCTATAACACTAATCTTCCTTTAGATGCTACACCAGAGCAACGTATTGAAGCGACTGTGGGGTATCTGGGTGCATCTTATGATGTTCCATCATTGGTGGACAAGCTTCTCCATCAACTCGCCAGCAAGCAAACCATTGTTGTAAATGTTTATGACACAACTGATGCATCTGCACCTATCACAATGTATGGTACTGATGTTACTGACACTGGCCTACTACGCATAAGCAGCCTAGATTTTGGGGATCCGCTACGAAAACATGAGATGCACTGCAGGTTCAAACAGAGACCTCCATTACCTTGGACAGCAATCAATGCATCAGGGGGGGTGTTTGTTATTACTTTGCTTGTGGGTCATATTTTTTATGCAGCAATAAATAGAATAATAAAAGTTGAGCATGGCTATAGTGTAATGAGTGAGCTGAAAAGTCGTGCTGAGGCTGCAGATGTGGCAAAATCCCAGTTTCTTGCTACAGTTTCACATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGACACTGAGCTCGATAAAAGACAGATGGATTATGCCCAAACTGCACATGATAGTGGTAAAGATCTCATATCAGTCATAAACGAGGTTCTTGATCAGGCTAAGATTGAGGCTGGAAAGCTTGAACTTGAAGCTGTAGCTTTTGATCCACGTGCTATTCTGGATGAAGTTTTATCTCCTTTCTCTGAAAAATCTAAAGTAGTAGAGCTGGCTGTTTATGCATCCAATCACGTACCTCAAGTTGTCATTGGTGATCCTAAACGATTCCGGCAAGTAATTACAAATCTTGTCAGCAATTCAGTCAAGTTCAATCATGATAAAGGACATGTGTTTGTCTCTGTTCATCTGGCAAATGAAGTGAAGAACCCACTTCATATTATGGATCCAGTGCTGAGTGAAGGCTTCAACATCAATCAGGATGTATCAAACAGAACATATGATACATTAAGCGGGTTTCCTGTATGCAACAAATGGAAAAGTTGGGCAAATTTTGAGAAGTTAAGTAGCGTAGATGATCCTGAAATTATTCAATTATTAGTAATAGTTGAGGACACAGGTACAGGAATTCCTACAGATGCACAAAGCCGAATATTCACACCTTTTATGCAGGCTGATAGTTCCCCCTCCCGAACATATGGTGGAACTGGAATTGGGTTGAGCATTAGTAAATGCTTAGTTGACCTCATGGGAGGTGAAATTGGATTTGTAAGTGAGCCTGGAATAGGAAGTACTTTTTCCTTTACTGGAACTTTCAGAAAAGGAGAAAGCACGTCTCTAGATGCAATGTGGCAGAATAATAATTTTGGTTCAGAGTTCCAAGGATTGAGAGCATTAGTGGTAGATAGAAGAAAAATCCGAGCTGAGGTCACAAGATATCATCTGCAGAGATTAGGAATGTCTGTGGATATAACTAATAGTCTGAATTCTGCATGCTCTTGTCTATCTAATACTTGCAACATGAGTACGTCAAACCAGTTGGCCATGATTTTGATAGACAAGGATGCTTGGGATAAAGAATGTCTTATCTTATGCAAAATCAGGAAGCTTAGACAGAATGGCATCAAAAGGGATCCAATTTTACCAAAGATTTATCTCCTGGACGCCCACCCTAGCATTGAGGAACATGCTGAGCTGAAGTCAGTTGGTATCATAGATGATATACTAACGAAGCCTCTCTGGCTTAGTTCTTTGGTTCAATCTTACAAAGAATCCCTTGGCACTGAAAAAAATGAAGTAAATAGGAAGAAAGTATCCAAACTTGGAAGTTTATTAATGAACAAACAAATTTTGGTGGTTGATGATAATGCAGTGAACAGAAGAGTTGCAAAAGGTTTTCTACAGAAATACGAGGCAAAAGTTACTTCTGTGGAGAGTGGCATGGCTGCTCTAGAGGTGCTTAAACTGCCACATAATTTTGATGCTTGTTTTATGGATCTCCAAATGCCAGAAATGAATGGTTTTGAAGCAACAAGGGAAATCCGCCGACTGGAGAGCGAGGTAAATGAGAAAATTGCGTGTGGGCAAGCATCTGCAGAGATGTATGGTAACATCTCTTATTGGCACATTCCAGTACTAGCAATGACAGCAGATGCAACTCAGAGTTCAAGTGAAGAGTGCAGAAATTGCGGAATGGATGACTACGTGACGAAGCCATTTGAAGAAGAGCAGCTCTATACGGCAATGGCACGGTTCTTCTTGCCAGATTCATAG 3570 0.4098 MSVNRKPPASNGRLPSNMKSWKVNEPLHGSNSSRTCRRKPLLLWFFGFVAVGSIWFILSFNSSYLVNKENEAICEKRARMLLHRYNVSREQIYALTSLFPGSDQILFNCIDERRLRMLLRSGMVSTPQLMCPENEESKKERICVADTVEPIEQCPILNDYVQNIVQPLELRVSAIWGHVNSSNLTKGFWWVLIGIVMSYFCLLWRSQKQKLVQGHPAAQQKRLKHFARGPSRGAGRWRKKLLVIFVSLGIFGSFWLFWHLNMDIMQRREEMLTNMCDERARMLQDQFNVSMNHVHALAILVSTFHHDKHPSAIDQKIFGEYTESTAFERPLTSGVAYALKVLHSDRMHFEKQHGWTIKKMETENEALVQDCIPGNLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYNTNLPLDATPEQRIEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDTTDASAPITMYGTDVTDTGLLRISSLDFGDPLRKHEMHCRFKQRPPLPWTAINASGGVFVITLLVGHIFYAAINRIIKVEHGYSVMSELKSRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDKRQMDYAQTAHDSGKDLISVINEVLDQAKIEAGKLELEAVAFDPRAILDEVLSPFSEKSKVVELAVYASNHVPQVVIGDPKRFRQVITNLVSNSVKFNHDKGHVFVSVHLANEVKNPLHIMDPVLSEGFNINQDVSNRTYDTLSGFPVCNKWKSWANFEKLSSVDDPEIIQLLVIVEDTGTGIPTDAQSRIFTPFMQADSSPSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPGIGSTFSFTGTFRKGESTSLDAMWQNNNFGSEFQGLRALVVDRRKIRAEVTRYHLQRLGMSVDITNSLNSACSCLSNTCNMSTSNQLAMILIDKDAWDKECLILCKIRKLRQNGIKRDPILPKIYLLDAHPSIEEHAELKSVGIIDDILTKPLWLSSLVQSYKESLGTEKNEVNRKKVSKLGSLLMNKQILVVDDNAVNRRVAKGFLQKYEAKVTSVESGMAALEVLKLPHNFDACFMDLQMPEMNGFEATREIRRLESEVNEKIACGQASAEMYGNISYWHIPVLAMTADATQSSSEECRNCGMDDYVTKPFEEEQLYTAMARFFLPDS* 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03845 1189 SMART CHASE_2 309 508 IPR006189 -
Phac8g03845 1189 CDD HATPase_EvgS-ArcB-TorS-like 709 868 - -
Phac8g03845 1189 ProSiteProfiles Histidine kinase domain profile. 601 873 IPR005467 -
Phac8g03845 1189 MobiDBLite consensus disorder prediction 1 34 - -
Phac8g03845 1189 SMART REC_2 1047 1181 IPR001789 GO:0000160
Phac8g03845 1189 FunFam Histidine kinase 4 566 657 - -
Phac8g03845 1189 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 581 660 IPR036097 GO:0000155|GO:0007165
Phac8g03845 1189 PRINTS Bacterial sensor protein C-terminal signature 798 812 IPR004358 GO:0016310|GO:0016772
Phac8g03845 1189 PRINTS Bacterial sensor protein C-terminal signature 857 870 IPR004358 GO:0016310|GO:0016772
Phac8g03845 1189 PRINTS Bacterial sensor protein C-terminal signature 833 851 IPR004358 GO:0016310|GO:0016772
Phac8g03845 1189 PRINTS Bacterial sensor protein C-terminal signature 816 826 IPR004358 GO:0016310|GO:0016772
Phac8g03845 1189 Gene3D - 569 657 - -
Phac8g03845 1189 SMART HKATPase_4 704 873 IPR003594 -
Phac8g03845 1189 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 704 868 IPR003594 -
Phac8g03845 1189 SUPERFAMILY CheY-like 1046 1183 IPR011006 -
Phac8g03845 1189 Gene3D - 889 1029 - -
Phac8g03845 1189 Gene3D - 1042 1186 - -
Phac8g03845 1189 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 648 868 IPR036890 -
Phac8g03845 1189 CDD REC_hyHK_CKI1_RcsC-like 1049 1181 - -
Phac8g03845 1189 Pfam CHASE domain 312 506 IPR006189 -
Phac8g03845 1189 Gene3D - 658 874 IPR036890 -
Phac8g03845 1189 Gene3D CHASE domain 313 540 IPR042240 -
Phac8g03845 1189 Gene3D - 260 312 - -
Phac8g03845 1189 Gene3D - 66 101 - -
Phac8g03845 1189 SUPERFAMILY CheY-like 891 1023 IPR011006 -
Phac8g03845 1189 SMART HisKA_10 594 659 IPR003661 GO:0000155|GO:0007165
Phac8g03845 1189 CDD HisKA 594 655 IPR003661 GO:0000155|GO:0007165
Phac8g03845 1189 ProSiteProfiles CHASE domain profile. 309 533 IPR006189 -
Phac8g03845 1189 Pfam His Kinase A (phospho-acceptor) domain 594 659 IPR003661 GO:0000155|GO:0007165
Phac8g03845 1189 ProSiteProfiles Response regulatory domain profile. 896 1025 IPR001789 GO:0000160
Phac8g03845 1189 Pfam Response regulator receiver domain 1049 1181 IPR001789 GO:0000160
Phac8g03845 1189 ProSiteProfiles Response regulatory domain profile. 1048 1185 IPR001789 GO:0000160
Phac8g03845 1189 FunFam Histidine kinase 4 313 540 - -
Phac8g03845 1189 PANTHER TWO-COMPONENT HISTIDINE KINASE 207 1178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03845 Phac-Chr8 44302145 44311719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03845 45 1187 Miscellaneous Gene Families AT5G35750 58.233 0.0 1302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac8g03845 CHASE 1.2e-33 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03845 K14489 - gmx:100805107 2031.91