Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03843 ATGCTGTTAAGGAGTGGCATGGTCAGCACTCCACAGTTAATGTGTCCAGAGAATGAGGAGTCAAAAAAGGAGCGTATATGTGTAGCAGACACTGTAGAACCTATCGAACAATGTCCAATTCTCAATGATTATGTCCAGAACATTGTGCAACCGTTGGAACTGAGGGTATCTGCAATTTGGGGTCATGTGAATTCATCTAATTTAACTAAAGGATTCTGGTGGGTCCTTATTGGAATTGTAATGTCCTACTTCTGTTTACTATGGAGGAGTCAAAAGCAGAAGCTAGTTCAGGGGCATCCAGCTGCACAACAAAAGCGGCTGAAGCATTTTGCTCGGGGTCCTTCAAGGGGTGCTGGGAGGTGGAGGAAAAAGTTACTAGTTATATTTGTGTCACTTGGAATATTTGGGTCCTTTTGGTTATTTTGGCACCTAAATATGGACATCATGCAGAGAAGAGAAGAAATGCTAACCAATATGTGTGATGAGAGAGCCCGTATGCTGCAAGATCAGTTTAATGTGAGCATGAACCATGTTCATGCTCTGGCTATCCTTGTATCTACATTTCACCATGATAAACATCCTTCTGCAATCGACCAGAAAATTTTTGGAGAATATACCGAGAGTACAGCATTTGAAAGACCACTTACTAGTGGTGTTGCTTATGCTTTGAAAGTTCTTCATTCAGATAGGATGCATTTTGAGAAACAGCATGGGTGGACAATTAAGAAAATGGAAACAGAGAATGAGGCATTAGTCCAAGATTGCATTCCCGGAAATTTGGATCCAGCACCCATTCAAGATGAATATGCACCAGTGATATTTGCTCAAGAAACAGTTTCCCATATTGTATCTATTGACATGATGTCAGGGAAGGAGGACCGTGAGAATATTCTGCGAGCAAGGGCATCTGGAAAGGGGGTTCTCACATCCCCTTTTAAACTACTAAAGTCCAATCACCTGGGTGTTGTACTTACATTTGCTGTCTATAACACTAATCTTCCTTTAGATGCTACACCAGAGCAACGTATTGAAGCGACTGTGGGGTATCTGGGTGCATCTTATGATGTTCCATCATTGGTGGACAAGCTTCTCCATCAACTCGCCAGCAAGCAAACCATTGTTGTAAATGTTTATGACACAACTGATGCATCTGCACCTATCACAATGTATGGTACTGATGTTACTGACACTGGCCTACTACGCATAAGCAGCCTAGATTTTGGGGATCCGCTACGAAAACATGAGATGCACTGCAGGTTCAAACAGAGACCTCCATTACCTTGGACAGCAATCAATGCATCAGGGGGGGTGTTTGTTATTACTTTGCTTGTGGGTCATATTTTTTATGCAGCAATAAATAGAATAATAAAAGTTGAGCATGGCTATAGTGTAATGAGTGAGCTGAAAAGTCGTGCTGAGGCTGCAGATGTGGCAAAATCCCAGTTTCTTGCTACAGTTTCACATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGACACTGAGCTCGATAAAAGACAGATGGATTATGCCCAAACTGCACATGATAGTGGTAAAGATCTCATATCAGTCATAAACGAGGTTCTTGATCAGGCTAAGATTGAGGCTGGAAAGCTTGAACTTGAAGCTGTAGCTTTTGATCCACGTGCTATTCTGGATGAAGTTTTATCTCCTTTCTCTGAAAAATCTAAAGTAGTAGAGCTGGCTGTTTATGCATCCAATCACGTACCTCAAGTTGTCATTGGTGATCCTAAACGATTCCGGCAAGTAATTACAAATCTTGTCAGCAATTCAGTCAAGTTCAATCATGATAAAGGACATGTGTTTGTCTCTGTTCATCTGGCAAATGAAGTGAAGAACCCACTTCATATTATGGATCCAGTGCTGAGTGAAGGCTTCAACATCAATCAGGATGTATCAAACAGAACATATGATACATTAAGCGGGTTTCCTGTATGCAACAAATGGAAAAGTTGGGCAAATTTTGAGAAGTTAAGTAGCGTAGATGATCCTGAAATTATTCAATTATTAGTAATAGTTGAGGACACAGGTACAGGAATTCCTACAGATGCACAAAGCCGAATATTCACACCTTTTATGCAGGCTGATAGTTCCCCCTCCCGAACATATGGTGGAACTGGAATTGGGTTGAGCATTAGTAAATGCTTAGTTGACCTCATGGGAGGTGAAATTGGATTTGTAAGTGAGCCTGGAATAGGAAGTACTTTTTCCTTTACTGGAACTTTCAGAAAAGGAGAAAGCACGTCTCTAGATGCAATGTGGCAGAATAATAATTTTGGTTCAGAGTTCCAAGGATTGAGAGCATTAGTGGTAGATAGAAGAAAAATCCGAGCTGAGGTCACAAGATATCATCTGCAGAGATTAGGAATGTCTGTGGATATAACTAATAGTCTGAATTCTGCATGCTCTTGTCTATCTAATACTTGCAACATGAGTACGTCAAACCAGTTGGCCATGATTTTGATAGACAAGGATGCTTGGGATAAAGAATGTCTTATCTTATGCAAAATCAGGAAGCTTAGACAGAATGGCATCAAAAGGGATCCAATTTTACCAAAGATTTATCTCCTGGACGCCCACCCTAGCATTGAGGAACATGCTGAGCTGAAGTCAGTTGGTATCATAGATGATATACTAACGAAGCCTCTCTGGCTTAGTTCTTTGGTTCAATCTTACAAAGAATCCCTTGGCACTGAAAAAAATGAAGTAAATAGGAAGAAAGTATCCAAACTTGGAAGTTTATTAATGAACAAACAAATTTTGGTGGTTGATGATAATGCAGTGAACAGAAGAGTTGCAAAAGGTTTTCTACAGAAATACGAGGCAAAAGTTACTTCTGTGGAGAGTGGCATGGCTGCTCTAGAGGTGCTTAAACTGCCACATAATTTTGATGCTTGTTTTATGGATCTCCAAATGCCAGAAATGAATGGTTTTGAAGCAACAAGGGAAATCCGCCGACTGGAGAGCGAGGTAAATGAGAAAATTGCGTGTGGGCAAGCATCTGCAGAGATGTATGGTAACATCTCTTATTGGCACATTCCAGTACTAGCAATGACAGCAGATGCAACTCAGAGTTCAAGTGAAGAGTGCAGAAATTGCGGAATGGATGACTACGTGACGAAGCCATTTGAAGAAGAGCAGCTCTATACGGCAATGGCACGGTTCTTCTTGCCAGATTCATAG 3222 0.4097 MLLRSGMVSTPQLMCPENEESKKERICVADTVEPIEQCPILNDYVQNIVQPLELRVSAIWGHVNSSNLTKGFWWVLIGIVMSYFCLLWRSQKQKLVQGHPAAQQKRLKHFARGPSRGAGRWRKKLLVIFVSLGIFGSFWLFWHLNMDIMQRREEMLTNMCDERARMLQDQFNVSMNHVHALAILVSTFHHDKHPSAIDQKIFGEYTESTAFERPLTSGVAYALKVLHSDRMHFEKQHGWTIKKMETENEALVQDCIPGNLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYNTNLPLDATPEQRIEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDTTDASAPITMYGTDVTDTGLLRISSLDFGDPLRKHEMHCRFKQRPPLPWTAINASGGVFVITLLVGHIFYAAINRIIKVEHGYSVMSELKSRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDKRQMDYAQTAHDSGKDLISVINEVLDQAKIEAGKLELEAVAFDPRAILDEVLSPFSEKSKVVELAVYASNHVPQVVIGDPKRFRQVITNLVSNSVKFNHDKGHVFVSVHLANEVKNPLHIMDPVLSEGFNINQDVSNRTYDTLSGFPVCNKWKSWANFEKLSSVDDPEIIQLLVIVEDTGTGIPTDAQSRIFTPFMQADSSPSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPGIGSTFSFTGTFRKGESTSLDAMWQNNNFGSEFQGLRALVVDRRKIRAEVTRYHLQRLGMSVDITNSLNSACSCLSNTCNMSTSNQLAMILIDKDAWDKECLILCKIRKLRQNGIKRDPILPKIYLLDAHPSIEEHAELKSVGIIDDILTKPLWLSSLVQSYKESLGTEKNEVNRKKVSKLGSLLMNKQILVVDDNAVNRRVAKGFLQKYEAKVTSVESGMAALEVLKLPHNFDACFMDLQMPEMNGFEATREIRRLESEVNEKIACGQASAEMYGNISYWHIPVLAMTADATQSSSEECRNCGMDDYVTKPFEEEQLYTAMARFFLPDS* 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03843 1073 Gene3D CHASE domain 197 424 IPR042240 -
Phac8g03843 1073 ProSiteProfiles Response regulatory domain profile. 780 909 IPR001789 GO:0000160
Phac8g03843 1073 SMART HKATPase_4 588 757 IPR003594 -
Phac8g03843 1073 Pfam Response regulator receiver domain 933 1065 IPR001789 GO:0000160
Phac8g03843 1073 ProSiteProfiles Response regulatory domain profile. 932 1069 IPR001789 GO:0000160
Phac8g03843 1073 Pfam CHASE domain 196 390 IPR006189 -
Phac8g03843 1073 Gene3D - 453 541 - -
Phac8g03843 1073 SMART HisKA_10 478 543 IPR003661 GO:0000155|GO:0007165
Phac8g03843 1073 Gene3D - 144 196 - -
Phac8g03843 1073 CDD HisKA 478 539 IPR003661 GO:0000155|GO:0007165
Phac8g03843 1073 SMART REC_2 931 1065 IPR001789 GO:0000160
Phac8g03843 1073 ProSiteProfiles Histidine kinase domain profile. 485 757 IPR005467 -
Phac8g03843 1073 FunFam Histidine kinase 4 450 541 - -
Phac8g03843 1073 Pfam His Kinase A (phospho-acceptor) domain 478 543 IPR003661 GO:0000155|GO:0007165
Phac8g03843 1073 CDD HATPase_EvgS-ArcB-TorS-like 593 752 - -
Phac8g03843 1073 SUPERFAMILY CheY-like 775 907 IPR011006 -
Phac8g03843 1073 PRINTS Bacterial sensor protein C-terminal signature 717 735 IPR004358 GO:0016310|GO:0016772
Phac8g03843 1073 PRINTS Bacterial sensor protein C-terminal signature 700 710 IPR004358 GO:0016310|GO:0016772
Phac8g03843 1073 PRINTS Bacterial sensor protein C-terminal signature 682 696 IPR004358 GO:0016310|GO:0016772
Phac8g03843 1073 PRINTS Bacterial sensor protein C-terminal signature 741 754 IPR004358 GO:0016310|GO:0016772
Phac8g03843 1073 Gene3D - 542 758 IPR036890 -
Phac8g03843 1073 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 465 544 IPR036097 GO:0000155|GO:0007165
Phac8g03843 1073 Gene3D - 773 913 - -
Phac8g03843 1073 Gene3D - 926 1070 - -
Phac8g03843 1073 ProSiteProfiles CHASE domain profile. 193 417 IPR006189 -
Phac8g03843 1073 FunFam Histidine kinase 4 197 424 - -
Phac8g03843 1073 PANTHER TWO-COMPONENT HISTIDINE KINASE 119 1062 - -
Phac8g03843 1073 SMART CHASE_2 193 392 IPR006189 -
Phac8g03843 1073 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 532 752 IPR036890 -
Phac8g03843 1073 SUPERFAMILY CheY-like 930 1067 IPR011006 -
Phac8g03843 1073 CDD REC_hyHK_CKI1_RcsC-like 933 1065 - -
Phac8g03843 1073 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 588 752 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03843 Phac-Chr8 44302145 44311719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03843 65 1071 Miscellaneous Gene Families AT5G35750 63.520 0.0 1285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac8g03843 CHASE 9.9e-34 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03843 K14489 - gmx:100805107 1836.23