Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03827 ATGTCCCAAGAAAGCACGTCCTCAAATGGTGGTGATTGTGGTGCCACCATTGAACTTGGTGCTACCTTACTTGGTTCTGCTACCAAAGGGAAGTACACAAGGATATGGCGTAAGAGTTTATACATAAGGTGGTTCCTCATCTCCGCCAAGAAGCCAGCAACTTCCAGTGGCAACCATGAGTCTCCACCATCACCAGATTCACTACTTCCTTCAATACCATTCACTTCATTCTCTCCTGCTAGAACCTCCTCTTCCAGATCCTATGTTGCAGTTGATATAGAAGAGAGCATTAGCAGTGATGCTGCTGGAATTGTGAAGGACCAGGACTTGAATTCTCTTCCTGGTCTGGGTGAAGTTGACTTCGGTTCAACTCTCCTTGGTGGTCAACTTCAATACGCACAGGAGCACCATGATTTTGAGGCGGGGAAAACCAGCATACCATTACTAGACTTGTTCAATTCTTTGTTGAACAGCTACAAATGCTACCGTTGCACAATTTTGATGCTGTTGGTCTCAGCTGGGTTGTCATTCGCCATAGAGTTCAAGCAGGAGGGACCTAAACATGGTTGGCATGATGGTGTTGCTATACTATTTGCTCTGCTCCTGCTGGTTCTAGGAAGATCAGTGGCAAACTTTTTGTGTGAGAGGAAAAAGTTGAAATTGGCGGGGAGAAAGCAGGAGTTAGAATGCAGAGTGAAACGAGGTGAAGAGTTCAAAGTGGTTCCCATATCTGATATTCAGGTGGGAGAGGCAGTGTTCCTGTGGCCAGGAGATGTGGTTCCAGCAGATGGTGAGCTTGCAAGTGATGGCATCCTTGTGCTGGCTGAGCTTCAGGAAATCAAAAGCAAGGAGCAGAATCCATCTCTTATAACTGGTTCAAAGGTGATTGGGGGTCAGGGAAGGATGTTGGTAACATCAGTTGGAACCAAAACCAATTTGGCTAATATAGGTATCTGTAATTCTGAAAGGAGGGGTTTGTTGGAAAGGCAAATTGAGAAGCCAATTTCTTACATTGACATGGCTGCTCTTTCTATCTCTGTACTGGTTGCATTTGTGGTGTTAGTTCGCCTGATTTATGGAAAAGATAGGAGCAATGCAGGGTTACCAGAAATGAAAGGGAAGGTCTCAATTGGCATTTTGATGAAAGTCCTTGAGAGAATTTTTCTGAGACCGCAAGGAAGGGTTTCCATTTTATCAGGTCTTGTTACTGTTGCAATACTTTGCGTGCAGCATGGAATGCCACTTGTGGTTACAATTTCTCTTAAGTACCAGATTGATAAGGAACTGCAAAACCTAGATGCAGTTCTTAATGATTTGTCTGCTTGTACTACAATGGGGTTGGTAACTGTCATCTGCATTGATGTGTCAGGGGAGCTAATATCCAAGCAAATGGAAGTTAGCAGAATATCTGTGGGAGAGGAAGATATCATGAGCATGGTTGAGGCAGCAGAAATAGAAAAATTACCAGTGCTTGACATGCTTAAAGTAGGGGTTGGTGTATCAGTCCTTGCACCAGAGATTTATCTTTCCCCTTTGTTCAATTCACTTGTTTCTTGGGCAGAAACAACATGGGAAATGAGCATGAGATCTTTCACCGAAGAAAAATTTGACATTCTTAAGCACAGCAAGTTGAATTCTGGCGGAGAAGGCAGTGGAGTTTTGGTGAGAAAAGTTGGGGACAGTGAAGTTCTGCACTTGCACTGGAGTGGAGCTGCATCAGCAATATTGGAGATGTGTTCACAGTACCATGACAGTGAAGGGAATTGCCACGCCATGGAAAATCAGAGAACCAAATTTCTTGAGGTGATTAAAGACATGGAGGATAATGGATTCTGGCCAATGGCTTTTGCTTATAAACAAACAGATGGTGAAGAGCTTGAGCAAGAAGAACTGATCTTATCTGGAGTGATAGGCCTGAAAGACACCAGTCAAGAATGTGAATCCATAAAATCAGCTTTGGAAAATTTCAGAAATGATGCAAATGTACAGATCAAACTGGTTTCGGAGGATGGCATTGAGAAATTGGAAGGCATTGCTTGTGAACTAGGACTAGAACACGGTGTTGTGCTTGAAGGCAAACAACTTCAAGATTTGAATGAGGAAGCTAGATTAGTCGAAGTGGATCGGGCCCATGTAATGGCAAGATTCCTTCCTGAGGACAAACTTCTCATGATACAGTGCTTGCAAGAGAAAGGTAAGGTGGTTGCATTCATTGGAACAAGGTTGATGACTGATCATACTTCAGTTCTAAAAGTAGCTGACGTGGGGATAGTTCTTGATTCTCTAAGCACAAGAGTGGATAGAGATAGCTGTGACATATCTATCAAATGCTTCAGTTCATTGGAACCCATTGTGATAGCTGGCAGAAGTAAATACTTCAACATTCAGAAGTTCATTCAACTTCAGCTGACATGTATCATATCAGGATCAGTCATAACCTTGATTACAACCTGTGCTGGAGATTCCCCTCTTGCACCATTCCAGTTGATTTGGGTGAATGTTTTGGTGTGCATTCTGGGTGGCCTAATGATGGTAATGACTTTAACCAACCAGGAACAGCTTTCTAAACAACCATCTGATCACAGGAACCAAAATATTATGGCCAAAGAAATCTGGAAAAGCATTGCCATTCAGATCGTCAATGTGCTCAACACCATGCAGTTGTTGAGAAAGGAAGTTCTTGTTCAGAGCTTCTATTTCTTGGGAGCCTTAGTTATCTGTTTTCTGATGCAAGTGGTGGTGATTGAGTATGCTAAAGGCCTAGCAGATTGCATGCAGTTGAATGCTACGAAATGGGGTATCTGTGTCATGATTGGTGGTCTTGCATGGGTATTTGAGTGGAGCATGAAGAATATTCTTCCAGTTTTACTCAATCCCAACACCAATTATTCTTCACAATCAATTACTTCACCTTCTTTCTTTCTTTCTCCAACTTTTCCATTTCTGATGCTACTTTTGTTCCCTATTGGACTATTTTTTAGTCAAATAGGCATGAACATGACACTTCGTTAG 3012 0.4253 MSQESTSSNGGDCGATIELGATLLGSATKGKYTRIWRKSLYIRWFLISAKKPATSSGNHESPPSPDSLLPSIPFTSFSPARTSSSRSYVAVDIEESISSDAAGIVKDQDLNSLPGLGEVDFGSTLLGGQLQYAQEHHDFEAGKTSIPLLDLFNSLLNSYKCYRCTILMLLVSAGLSFAIEFKQEGPKHGWHDGVAILFALLLLVLGRSVANFLCERKKLKLAGRKQELECRVKRGEEFKVVPISDIQVGEAVFLWPGDVVPADGELASDGILVLAELQEIKSKEQNPSLITGSKVIGGQGRMLVTSVGTKTNLANIGICNSERRGLLERQIEKPISYIDMAALSISVLVAFVVLVRLIYGKDRSNAGLPEMKGKVSIGILMKVLERIFLRPQGRVSILSGLVTVAILCVQHGMPLVVTISLKYQIDKELQNLDAVLNDLSACTTMGLVTVICIDVSGELISKQMEVSRISVGEEDIMSMVEAAEIEKLPVLDMLKVGVGVSVLAPEIYLSPLFNSLVSWAETTWEMSMRSFTEEKFDILKHSKLNSGGEGSGVLVRKVGDSEVLHLHWSGAASAILEMCSQYHDSEGNCHAMENQRTKFLEVIKDMEDNGFWPMAFAYKQTDGEELEQEELILSGVIGLKDTSQECESIKSALENFRNDANVQIKLVSEDGIEKLEGIACELGLEHGVVLEGKQLQDLNEEARLVEVDRAHVMARFLPEDKLLMIQCLQEKGKVVAFIGTRLMTDHTSVLKVADVGIVLDSLSTRVDRDSCDISIKCFSSLEPIVIAGRSKYFNIQKFIQLQLTCIISGSVITLITTCAGDSPLAPFQLIWVNVLVCILGGLMMVMTLTNQEQLSKQPSDHRNQNIMAKEIWKSIAIQIVNVLNTMQLLRKEVLVQSFYFLGALVICFLMQVVVIEYAKGLADCMQLNATKWGICVMIGGLAWVFEWSMKNILPVLLNPNTNYSSQSITSPSFFLSPTFPFLMLLLFPIGLFFSQIGMNMTLR* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03827 1003 Gene3D - 636 780 IPR023214 -
Phac8g03827 1003 PANTHER CATION TRANSPORTING ATPASE 160 881 - -
Phac8g03827 1003 SUPERFAMILY Calcium ATPase, transmembrane domain M 165 953 IPR023298 -
Phac8g03827 1003 SUPERFAMILY HAD-like 450 840 IPR036412 -
Phac8g03827 1003 Pfam E1-E2 ATPase 228 421 - -
Phac8g03827 1003 Gene3D - 214 318 - -
Phac8g03827 1003 Gene3D - 449 461 IPR023214 -
Phac8g03827 1003 Gene3D - 514 635 IPR023299 GO:0000166
Phac8g03827 1003 Gene3D - 377 448 - -
Phac8g03827 1003 Coils Coil 639 659 - -
Phac8g03827 1003 Gene3D - 462 476 IPR023299 GO:0000166
Phac8g03827 1003 SUPERFAMILY Calcium ATPase, transduction domain A 229 316 IPR008250 -
Phac8g03827 1003 Gene3D - 781 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03827 Phac-Chr8 44239157 44243070 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03827 62 963 Primary Pumps ATPases AT3G63380 29.809 1.42e-102 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03827 K01537 - gmx:102661547 1202.96