Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03816 ATGTCTTCGACAACTTCCTCTTCTTCTTCCTCGTCAACATCATCGTCAACTTCAACCCCATATGACGTTGTTGCTGCTGATGTTCCTGGCCCTAGTACGAGGAGAACCGCTCAATTTGAAGGCCCTTCTTCCTCTCGTCAACGTGCTATGAATGAGGTTTTGCCTGAACCTTTTCTCGAAGCTTTGGCCAACCAACTTGCCCTTCATGCTGCAAACTACAATGGTCGTCTTGCTGCTGCTCCTGCTCTTGCCAATTTGTTTCAGGTTTGTTCCACGTGGCGGGAGGTGTCGCGCTCGGATCTGCTGTGGGAGCACCTCACGAGGCGCATCTGGCGAAGGACGTTCCGAGTGAGGGACACGTGGCACCGGGAGTACATCAACTGCCATCGGACGGCGAGGAACTTCGAGACTGGGAGGTTGTCGTCTTCGATTCTGCAGTTCGGCCATTCGGAGCATCGCCGGAGCTTGATCTGCCGCTGCCTCGCCCTCTCCGACACCCGCCTTGCGTGCGGCTTCGTGGACGGCACCGTGCGCGTGTTCGACCTCGAAACCTACGCCCACGTCAGCACCTTTCTCTCCGACCACGGCCACCTCTTCGGGCCGTTTTCGCGCTCCATCTCGGGAATTGTTATAACCGACTCGAACATCACTTTCGCCAGGCTGGACGGGGATATCTACGTGGACGCCATCAACGTGCATGGCCAGAGCCAAGCCCGGCGGGCCGTGTCGGGCTTCGTGATGAACAATGGCCCGTTGGTCGGGTTCGCCGGAACAAGGCGGTGGTGGGTGGGCTTGTTCGCGGGTATAGCGGGGCGTTCTTTTCAGGTGTGGAACGCGGAGAGTGGGGAGAGCGTGTTCTTTGGGGGGTCGTTGACGGATCCGGAAACGGTTATGGGGTGGCACATGCTGACGGAGTTGGTTGACCCGGTGGGGCGTGTGCGCGTGACGGAGGGTGAGTTCGTGGTGGCGTGCACTGGTTTGAGGCTGATTTGTTTCAATGCTTGGAACCCGGAGGTTGTGCTGAGGGACGTTGTGTCGGCGTCGGGGTTCGTGGTGAATTCGATGGACGTGAGTGAGGAGGCTTTTGTGGTGGTGGAGCGTGGGGGCGTGGGAACGGTTTGGCGCGTGGGGACGATGGAGTTGATGAGCAGGTTTCGGTTGAGGGGTTCGTGGGTTCGGGGGTTGTGGGGTTGCATGAACCTTGGGTACGTGTTGACCTACTCACCCAACCCTGCACCGTTCTTGAGGGTTTGGAACATTGAACAAGAGGAAGGAAGGTTGTGTGTGAGAGTGTTTCTGCGTGCAGGTGAGGTGAGTAGCATGGTGGCTCATCACACGCACATGGCTTTCTCTTCCAACAACATTAACCTATTGGATTTTGGGGTACATGAGGATCCTTAG 1401 0.5732 MSSTTSSSSSSSTSSSTSTPYDVVAADVPGPSTRRTAQFEGPSSSRQRAMNEVLPEPFLEALANQLALHAANYNGRLAAAPALANLFQVCSTWREVSRSDLLWEHLTRRIWRRTFRVRDTWHREYINCHRTARNFETGRLSSSILQFGHSEHRRSLICRCLALSDTRLACGFVDGTVRVFDLETYAHVSTFLSDHGHLFGPFSRSISGIVITDSNITFARLDGDIYVDAINVHGQSQARRAVSGFVMNNGPLVGFAGTRRWWVGLFAGIAGRSFQVWNAESGESVFFGGSLTDPETVMGWHMLTELVDPVGRVRVTEGEFVVACTGLRLICFNAWNPEVVLRDVVSASGFVVNSMDVSEEAFVVVERGGVGTVWRVGTMELMSRFRLRGSWVRGLWGCMNLGYVLTYSPNPAPFLRVWNIEQEEGRLCVRVFLRAGEVSSMVAHHTHMAFSSNNINLLDFGVHEDP* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03816 466 SUPERFAMILY F-box domain 82 130 IPR036047 GO:0005515
Phac8g03816 466 MobiDBLite consensus disorder prediction 1 47 - -
Phac8g03816 466 Gene3D - 158 392 IPR015943 GO:0005515
Phac8g03816 466 MobiDBLite consensus disorder prediction 1 22 - -
Phac8g03816 466 Gene3D - 45 136 - -
Phac8g03816 466 PANTHER WD40 REPEAT PROTEIN 12, 37 10 422 - -
Phac8g03816 466 SUPERFAMILY WD40 repeat-like 156 442 IPR036322 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Phac8g03816 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03816 - - gmx:100807240 624.394