Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03787 ATGCCACTAACCCTAAATCTCACGCAGCTCACCGGTGCCGCCACGACCATCCGATCTCCGCCCAGTGTCACGACCATCCGGGCATTCACGGCGACGATCGATTCCCGGAGGCCGGCGAGCCTCTATGAAGTTCTGCGCATCAAGCAGAACGCGTCGTCGGTGGAGATAAAATCGGCGTACCGGAACCTGGCTAAGGTGTACCACCCTGATTCGTCGCTCCGGCGTTCGGAATCGGACGAACGCGACTTCATCCAGATCCACGACGCGTACGAGACGTTGTCGGATCCGTCGGCGAGAGCGGTGTACGATCTGTCGTTGATGGCGGTGCGCGGCGGTAACGGCTCCTTCTCTTCTTTGGTGGCTCCGAATGGATCTTCCGGGTTGTACTACCAGACCCGCAAGTGGGAAACGGATCAGTGCTGGTAG 426 0.5962 MPLTLNLTQLTGAATTIRSPPSVTTIRAFTATIDSRRPASLYEVLRIKQNASSVEIKSAYRNLAKVYHPDSSLRRSESDERDFIQIHDAYETLSDPSARAVYDLSLMAVRGGNGSFSSLVAPNGSSGLYYQTRKWETDQCW* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03787 141 PRINTS DnaJ domain signature 42 60 IPR001623 -
Phac8g03787 141 PRINTS DnaJ domain signature 60 75 IPR001623 -
Phac8g03787 141 PRINTS DnaJ domain signature 78 98 IPR001623 -
Phac8g03787 141 SMART dnaj_3 39 98 IPR001623 -
Phac8g03787 141 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 21 141 - -
Phac8g03787 141 CDD DnaJ 42 95 IPR001623 -
Phac8g03787 141 ProSiteProfiles dnaJ domain profile. 40 106 IPR001623 -
Phac8g03787 141 Pfam DnaJ domain 41 103 IPR001623 -
Phac8g03787 141 Gene3D DnaJ domain 29 115 IPR036869 -
Phac8g03787 141 SUPERFAMILY Chaperone J-domain 40 119 IPR036869 -
Phac8g03787 141 ProSitePatterns Nt-dnaJ domain signature. 83 102 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03787 Phac-Chr8 44035088 44035866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03787 42 103 C2H2 Transcription Factor Family AT1G74250 43.939 1.58e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03787 - - gmx:100786034 222.631