Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03780 ATGCCGCAGGAACCTTTAGCACACTCGATTTTCGCATCTCCTCATAAGAGAGGATTGAATTTGAAAAGTTCGGGTTCAGTTTGTAACAACAATGAGGCTTCATACACCACCGTGATGGGGGAGGAGAGCATCAACGATCATGAATTGGCTCAGAGGAAAGCAGAGGAAGCAGCTTCAAGGAGATACGAAGCTGCAGAATGGCTTGCCCAAATGGACAATGGCGCATCTTCATCGCTCTCCAAGGAACCCTCCGAAGAGGAATTCTGCCTCGCACTGAGGAACGGTCTCATTCTCTGCAACGTCCTCAACAGAGTCAACCCCGGCGCCGTCGTCAAGGTTGTCGACAATGCGGTGGTCGACAACCTCGCCCTTCAGTCTTCCGAGGGACCCGCCCAGTCCGCAATTCAGTATTTCGAGAACATGCGGAACTTTCTGGAGGCCGTCACCAACATGAAGCTTTTGACATTCGAAGCTTCTGATTTGGAAAAGGGGGGTTCGTCGAGCAAAGTTGTGGACTGCATTCTCTGTTTGAAAGGGTATTATGAATGGAAGCTGTCGGGTGGAGTTGGTGTGTGGAGATATGGTGGAACTGTGAGGATTACTTCCTTCCCCAAATGGTCTCCTTCCAACATACTCGGCACTGAAAGTGTTGACGAGTCTGAGTCATCACAGTTTCTTCATCTGTCTGGAGAGGTATCCATTGAAGAAACCAAAGCTGCTAATGCTTTGACTTCCTTTTTTGATCAGTTTGGACTCAAGCTTCTCCTGGCTTACCTCAAAGAATCTGATGAGGTTGATGATCTACCGTTGAATGCAATGGTAATAGATTCTTTGCTCAGGAAGGTTATCAGGGATTTTTCTGCATTGCTTGATTCTCAAGGCACTCAGCTTGGACATTTCCTCAAGAAAATATTGAAAGGAGATACTGATTGCCTCTCTAAGAGAGAATTTGTGGACGCTATCACATTATATCTGAATCAAAGACGCAGTTTGGCATCAAATGAAAGCTCTAAACTATGCACTTGCGGTGGAAAACGCGACAGTAATCAGCACAATGTCAAATATTGCGCCAAGCATGCTGAAATAATTGACGCCCAGCAAAAAGAGCTCGAGGGACTGAGGTACTTCTATGAAGAGATAAAATTGGAGCTCAAACAACTTCAATCAAAGTGGGACCAAGAATTGAACAGGCTTGAGAATCATATAAGGAGCCTTGAAGAGGCCTCCTCTTCGTATCACCAAGTTTTGGAGGAGAATCGTTTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTACTGTAGAGTGAGGCCCTTCTTGCCAGGGCAACCAAATGGACAATCTACTGTAGATTATATAGGAGAAAATGGAAACATAATGATTATGAATCCCCTTAAGCAAGGAAAAGATGCTAGAAGGGTATTTTCATTCAATAAGGTGTTTGCAACAAGTGCCACCCAAGAACAAATATACGCTGACACTCAACCATTGGTTAGGTCCGCTTTAGATGGATATAATGTATGCATCTTTGCATATGGACAGACTGGGTCAGGAAAAACCTACACAATGAGTGGTCCTGATCTGATGACTGAAGAGACATGGGGTGTAAACTACAGGGCTTTGCGTGACTTATTTCATATTTCAAAGGAAAGAGCAGATGCCATAAAATATGAAGTTGGCGTCCAGATGATTGAAATATACAATGAGCAAGTGAGAGATTTACTAGTCAGCGACGGCTCTAACAGAAGATTGGATATACGAAACAACTCTCAATTGAATGGGCTTAATGTGCCGGATGCATCTTTAGTTCCGGTTAATTGCACACAGGATGTTCTTGATTTAATGAAAGTTGGTCAGAGGAATCGTGCTGTTGGTGCTACAGCTCTAAATGAGCGAAGCAGCCGTTCTCATAGTGTATTGACAGTTCATGTCAGAGGGAGGGACTTAGAGTCTAACTCTATTCTTAAGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGAGTGGACAAGTCCGAGGCTGTTGGCGAGAGACTAAAGGAGGCTCAGCATATAAATAAATCTCTTTCTGCACTTGGGGATGTTATTGCTGCTTTGGCCCAGAAGAGTCAACATATTCCTTACAGAAATAGCAAGCTCACACAAGTTCTACAAGATTCATTAGGTGGTCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAGCTTAATGCTCTTGGAGAGACAATTAGCACACTTAAGTTTGCAGAGAGGGTTGCGACCATTGAACTTGGGGCTGCTCAATCTAATAAAGAAACTGGAGAAATTCGGGAGCTAAAGGAAGAGATATCAAATATGAAATCAGCATTGGAGAGGAAGGAAACTGAACTACAGCAATGGAAATCTGGGAATGCACGAAATCCTACAGAATCTCAGAAAGCACCAAGAGCTGTTTCACCTTTCCGTTTGCCCAAAAATGGTACCAGTGACAGCATGAAGTCTGAAAACTATCAAAGACACATGGACGATAGAAGTTCTGAGGCTAAAACTTGTTCTTCGGGTAAGCAAAGAAGGTCAAGATTTCCCTCAACTCATACAGAAAAGGAGTCAATGCCAAAAATGTCCATTCTGGCAGAAGAAAAAATAGTGAGCTCAGGGAAAAGTAGATCACCATCTCCTCCAGTAAGGAGGAGATCAATATCCTCTGGTAGAGGGTCAGTCATTAAAAGCAAGGAGTCAGTGAAGCAAGATCGCACTAATGAAACTCTCTTCAACAACCTCCAGAAGATAAACTCCCGGAAAGTTAATCAAGAACATGAAGAGGAACAACTCAAACAAGCTGCTCTTGGTGTGGTAAGACAAGGTGGAACTAGGAAAAACAAGGCCAAGGTTAAGCCTCATCAACAGTTTCCCTTTAGGATTCAAAAGCCTGATATGATGATACCTATTTCTGACATGGAAATTGGCCGTGATATGATCGTGGAAGCACCTCGAAAGAGCAATTATTGTGAGCCAGAAAATGATATAAGCCTAATGGAGTCTGCAGTCCACGGTGTTAATCTTAAAAAGATAAACCATAACATCTGTAGGACTTTTCAGAACATTGGGTCAAGAGGAATAGTCCAAGCAGCTGAACCATTATTGTCCAGCAAAGTTGAAAATAAAATATTACAACATGGTTCAGGACGCAATCTTAAGGAAGGCACCAACATTACATTGCCTGAATTTAGAAGGAGTCGATCTACCCCACGTGGAAATGACAACTATTGA 3264 0.4305 MPQEPLAHSIFASPHKRGLNLKSSGSVCNNNEASYTTVMGEESINDHELAQRKAEEAASRRYEAAEWLAQMDNGASSSLSKEPSEEEFCLALRNGLILCNVLNRVNPGAVVKVVDNAVVDNLALQSSEGPAQSAIQYFENMRNFLEAVTNMKLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKWSPSNILGTESVDESESSQFLHLSGEVSIEETKAANALTSFFDQFGLKLLLAYLKESDEVDDLPLNAMVIDSLLRKVIRDFSALLDSQGTQLGHFLKKILKGDTDCLSKREFVDAITLYLNQRRSLASNESSKLCTCGGKRDSNQHNVKYCAKHAEIIDAQQKELEGLRYFYEEIKLELKQLQSKWDQELNRLENHIRSLEEASSSYHQVLEENRFLYNQVQDLKGAIRVYCRVRPFLPGQPNGQSTVDYIGENGNIMIMNPLKQGKDARRVFSFNKVFATSATQEQIYADTQPLVRSALDGYNVCIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERADAIKYEVGVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQLNGLNVPDASLVPVNCTQDVLDLMKVGQRNRAVGATALNERSSRSHSVLTVHVRGRDLESNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVIAALAQKSQHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNALGETISTLKFAERVATIELGAAQSNKETGEIRELKEEISNMKSALERKETELQQWKSGNARNPTESQKAPRAVSPFRLPKNGTSDSMKSENYQRHMDDRSSEAKTCSSGKQRRSRFPSTHTEKESMPKMSILAEEKIVSSGKSRSPSPPVRRRSISSGRGSVIKSKESVKQDRTNETLFNNLQKINSRKVNQEHEEEQLKQAALGVVRQGGTRKNKAKVKPHQQFPFRIQKPDMMIPISDMEIGRDMIVEAPRKSNYCEPENDISLMESAVHGVNLKKINHNICRTFQNIGSRGIVQAAEPLLSSKVENKILQHGSGRNLKEGTNITLPEFRRSRSTPRGNDNY* 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03780 1087 ProSiteProfiles Calponin homology (CH) domain profile. 58 182 IPR001715 GO:0005515
Phac8g03780 1087 Coils Coil 377 408 - -
Phac8g03780 1087 MobiDBLite consensus disorder prediction 833 873 - -
Phac8g03780 1087 MobiDBLite consensus disorder prediction 794 916 - -
Phac8g03780 1087 Coils Coil 767 801 - -
Phac8g03780 1087 Gene3D Kinesin motor domain 375 762 IPR036961 -
Phac8g03780 1087 FunFam kinesin-like protein KIN-14F 50 182 - -
Phac8g03780 1087 Pfam Kinesin motor domain 438 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac8g03780 1087 FunFam kinesin-like protein KIN-14F 427 801 - -
Phac8g03780 1087 Gene3D - 50 182 IPR036872 -
Phac8g03780 1087 SMART ch_5 60 180 IPR001715 GO:0005515
Phac8g03780 1087 MobiDBLite consensus disorder prediction 883 907 - -
Phac8g03780 1087 MobiDBLite consensus disorder prediction 1059 1087 - -
Phac8g03780 1087 PRINTS Kinesin heavy chain signature 710 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac8g03780 1087 PRINTS Kinesin heavy chain signature 630 647 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac8g03780 1087 PRINTS Kinesin heavy chain signature 507 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac8g03780 1087 PRINTS Kinesin heavy chain signature 661 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac8g03780 1087 MobiDBLite consensus disorder prediction 798 812 - -
Phac8g03780 1087 ProSiteProfiles Kinesin motor domain profile. 432 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac8g03780 1087 CDD CH_AtKIN14-like 60 178 - -
Phac8g03780 1087 SUPERFAMILY Calponin-homology domain, CH-domain 52 210 IPR036872 -
Phac8g03780 1087 MobiDBLite consensus disorder prediction 1061 1077 - -
Phac8g03780 1087 SMART kinesin_4 430 768 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac8g03780 1087 Pfam Calponin homology (CH) domain 60 182 IPR001715 GO:0005515
Phac8g03780 1087 PANTHER KINESIN-LIKE PROTEIN KLP-3 65 929 IPR027640 GO:0003777|GO:0007018
Phac8g03780 1087 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 797 IPR027417 -
Phac8g03780 1087 Coils Coil 925 945 - -
Phac8g03780 1087 CDD KISc_C_terminal 430 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03780 Phac-Chr8 43987149 43996368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03780 368 760 Calmodulin-binding Proteins AT5G65930 42.172 3.75e-79 281