Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03776 ATGTCTGTAAGCTTAAGGAATCTCTCACTTCCTCCCAAAACCTTCTCCCTCACCTTGCTTCTTTTGTTGAACTCTCTTTTGTTTTCTTCTTGTTACTCCCTGCTTAATGAGCAAGGCCAAGCTCTTTTAGCATGGAAAAACAGTTTAAACAGTACTGCAGATGCACTAGCATCTTGGAGTCCTTCCAGCCCAAGCCCATGCAATTGGTTTGGGGTGAGCTGCAACTTACAAGGAGAGGTGGTTGAGATAAACCTGAAGTCAGTTAACTTGCAAGGCTCATTACCTTCAAATTTTCAAGCTCTAAGGTCCTTGAAGATTCTTGCCCTCTCAACAGCCAACATCACAGGCAGGATTCCAAAGGAGATTGGAGACTGTAAAGAGCTCACTTTCATTGATCTCAGTGGCAATTCTCTCTTTGGTGAAATCCCAGAAGAAATTTGCAGGCTGAGCAAACTGCAGACTTTAGCTCTGCATGCCAACTTTCTTGAAGGCAACATTCCATCCATCATTGGAAATTTATCAAGTCTGGTGAACTTGACACTCTATGACAACAAACTCAGTGGCGAAATTCCAAAGAGTATTGGCTCATTGACTGAGCTCCAAGTGTTGAGAGTAGGAGGGAACACAAACATTAAGGGTGAGGTGCCATGGGAAATTGGAAACTGCACCAACTTGGTGGTGTTAGGCCTTGCAGAAACCAGCATTTCTGGGAATCTTCCTTCTTCAATAGGGATGCTGAAAAGAATTCAAACCATAGCCATTTACACAACTCTGCTTTCAGGCTCTATACCAGAAGAGATAGGGAAGTGCAGTGAGTTGCAGAACCTGTACTTGTATCAGAACTCAATCTCTGGTTCAATCCCAAGTCAAATTGGAGAGCTCAGCAAGCTTCAGAATCTTCTCTTATGGCAAAACAATATAGTTGGTACAATCCCAGAAGAGCTTGGAAGCTGCACTCAACTGGAAGTCATAGACATCTCAGAAAATCTTCTCACAGGTAGCATACCAACCAGTTTTGGTAAGCTATCAAATCTACAAGGGCTTCAACTGAGTGTTAATAAGCTTTCAGGCATTATACCTCCTGAAATCACAAATTGCACTTCCCTGACTCAACTGGAAGTTGACAATAATGCTATTTTTGGAGAGATTCCTCCTAGTATCGGCAACTTAAGAAGCTTGACTCTCTTCTTTGCATGGCAGAACAAGTTGTCTGGAAAAATCCCAGATAGTCTTTCACAGTGCCAAGATCTTCAGGCACTTGATCTCTCTTACAACAATTTAACTGGTCCAATACCAAAACAACTTTTTGGGCTGAGGAACCTCACTAAACTGCTTCTTCTTTCCAATGATTTGTCAGGATCTATACCACCAGAGATAGGTAACTGCACAAGCCTCTATAGGTTGAGGCTAAATCACAATAGATTGTCAGGTACAGTTCCATCTGAGATCACCAACTTGAAAAATTTGAACTTTTTGGATGTGAGCAGAAATCATCTTGTCGGGGAAATTCCTCCTACACTATCCAGATGCAAAAATCTTGAGTTTCTGGACCTCCACTCAAATAGTCTGATTGGCTCAGTTCCAAACAATCTGCCCAAAAATCTACAGTTAATTGATCTCTCAGACAACATGCTAACTGGTGAACTGAGCCATTCCATTGGTTCATTAACCGAGTTAGCCAAACTCAACTTGGGAAAGAATCAACTCAGAGGAAGCATCCCTGCTGAGATCCTATCTTGCTCCAAGTTACAACTTCTGGACTTGGGACACAATAGTTTCTCTGGAGAAATTCCCAAGGAAGTTGCTCAAATTCCTTCACTAGAAATAGTTCTCAATCTGAGCTGTAACCAGTTTTCTGGTGAAATTCCACCCCAGTTCTCTGGTCTTAGGAAACTTGAAGTGCTTGACCTCTCCCACAACAAGCTCTCAGGGAAGTTGGATGCTCTCTCTGACCTTCAAAACCTTGTTTTGTTAAATGTTTCCTTCAATGATTTCACTGGAGAATTGGCTAACACCCCATTCTTCAGAAAGCTCCCTCTCAGTGATCTCACAGGAAATGATGGCCTCTACATTGTTGGTGTTGCAACTCCAAAGGAAGCCAAGGGTCATGCCAGGTTGTTCATGAAGATTACATTGTCCATTCTCTTAAGCATCAGTGCAGTACTTGTACTTCTCACAGTACATGTCTTGATTCGTGCTCATGTTTCTAACAAAGTACTCATGAGAAACAACAATTGGGTGTTAACTTTGTATCAGAAGTTTGAATTGTCTGTTGATGATGTTGTCCGGAATTTGACTTCATCCAATGTGATTGGCACTGGAAGCTCTGGAGTTGTGTACAAGGTTACAGTTCCAAATGGACAAACAGTAGCAGTTAAAAAGATGTGGTCATCGGCAGAGTCAGGAGCATTTACTTCTGAAATTCAAACACTAAGTTCAATCAGACACAAAAACATCATCAAGCTTCTGGGTTGGGGGTCCAGCAAGAACATGAAGCTGCTGTTTTATGAGTACCTCCCTAATGGAAGCCTGAGCTCATTACTTCATGGTTTAGGAAAAGGAAAAGCAGAATGGGAGACCAGATATGATGTTATGGTAGGAGTGGCTCATGCACTTGCATATTTGCACCATGATTGCGAGCCTTCCATATTGCATGGAGATGTTAAAGCCATGAACGTGTTGTTAGGTCCTGGCTATCAGCCTTACCTTGCTGACTTTGGCCTAGCTAGAATTGCAAGTGAAAATGTTGATTGTACTAATTCCAAGCCACTTCAAAGACCCTACCTTGCTGGCTCCTATGGGTACATGGCTCCAGAACACGCATCTATGCAGCAGATCACTGAGAAAAGTGATGTGTACAGTTTTGGTGTGGTCCTACTTGAGGTTCTTACAGGAAGGCACCCCCTTGACCCAACACTTCCTGGGGGTGGTGCACACTTGGTTCAGTGGGTTAGGAACCACTTAGCAAGCAAAGGAGACCCATGTGACATTCTTGACCCAAAACTGAGAGGGAGAACTGATTCCACTGTGCATGAAATGCTACAAACTCTAGCTGTGTCATTTCTATGTGTCAGCACCCGAGCTGAGGACCGTCCAACAATGAAGGACACTGTTGCACTGCTCAGGGAAATTCGACTTGTTGAGGCCCCAACCAGAGGTCCTGATGCATTGAAGGGAGTTTCAACAGTGCATGCTTCTCCATCACCTCTTAAAAATGTAGTTTCATAA 3228 0.4303 MSVSLRNLSLPPKTFSLTLLLLLNSLLFSSCYSLLNEQGQALLAWKNSLNSTADALASWSPSSPSPCNWFGVSCNLQGEVVEINLKSVNLQGSLPSNFQALRSLKILALSTANITGRIPKEIGDCKELTFIDLSGNSLFGEIPEEICRLSKLQTLALHANFLEGNIPSIIGNLSSLVNLTLYDNKLSGEIPKSIGSLTELQVLRVGGNTNIKGEVPWEIGNCTNLVVLGLAETSISGNLPSSIGMLKRIQTIAIYTTLLSGSIPEEIGKCSELQNLYLYQNSISGSIPSQIGELSKLQNLLLWQNNIVGTIPEELGSCTQLEVIDISENLLTGSIPTSFGKLSNLQGLQLSVNKLSGIIPPEITNCTSLTQLEVDNNAIFGEIPPSIGNLRSLTLFFAWQNKLSGKIPDSLSQCQDLQALDLSYNNLTGPIPKQLFGLRNLTKLLLLSNDLSGSIPPEIGNCTSLYRLRLNHNRLSGTVPSEITNLKNLNFLDVSRNHLVGEIPPTLSRCKNLEFLDLHSNSLIGSVPNNLPKNLQLIDLSDNMLTGELSHSIGSLTELAKLNLGKNQLRGSIPAEILSCSKLQLLDLGHNSFSGEIPKEVAQIPSLEIVLNLSCNQFSGEIPPQFSGLRKLEVLDLSHNKLSGKLDALSDLQNLVLLNVSFNDFTGELANTPFFRKLPLSDLTGNDGLYIVGVATPKEAKGHARLFMKITLSILLSISAVLVLLTVHVLIRAHVSNKVLMRNNNWVLTLYQKFELSVDDVVRNLTSSNVIGTGSSGVVYKVTVPNGQTVAVKKMWSSAESGAFTSEIQTLSSIRHKNIIKLLGWGSSKNMKLLFYEYLPNGSLSSLLHGLGKGKAEWETRYDVMVGVAHALAYLHHDCEPSILHGDVKAMNVLLGPGYQPYLADFGLARIASENVDCTNSKPLQRPYLAGSYGYMAPEHASMQQITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGGAHLVQWVRNHLASKGDPCDILDPKLRGRTDSTVHEMLQTLAVSFLCVSTRAEDRPTMKDTVALLREIRLVEAPTRGPDALKGVSTVHASPSPLKNVVS* 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03776 1075 Gene3D Ribonuclease Inhibitor 532 609 IPR032675 -
Phac8g03776 1075 Gene3D Ribonuclease Inhibitor 237 334 IPR032675 -
Phac8g03776 1075 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 194 285 - -
Phac8g03776 1075 Gene3D Ribonuclease Inhibitor 610 700 IPR032675 -
Phac8g03776 1075 SMART LRR_typ_2 486 510 IPR003591 -
Phac8g03776 1075 SMART LRR_typ_2 629 652 IPR003591 -
Phac8g03776 1075 SMART LRR_typ_2 438 462 IPR003591 -
Phac8g03776 1075 SMART LRR_typ_2 173 197 IPR003591 -
Phac8g03776 1075 SMART LRR_typ_2 294 318 IPR003591 -
Phac8g03776 1075 SMART LRR_typ_2 101 125 IPR003591 -
Phac8g03776 1075 SMART LRR_typ_2 342 366 IPR003591 -
Phac8g03776 1075 SMART LRR_typ_2 556 580 IPR003591 -
Phac8g03776 1075 ProSitePatterns Serine/Threonine protein kinases active-site signature. 883 895 IPR008271 GO:0004672|GO:0006468
Phac8g03776 1075 SUPERFAMILY L domain-like 610 683 - -
Phac8g03776 1075 Gene3D Ribonuclease Inhibitor 150 236 IPR032675 -
Phac8g03776 1075 ProSiteProfiles Leucine-rich repeat profile. 631 653 IPR001611 GO:0005515
Phac8g03776 1075 FunFam Putative LRR receptor-like serine/threonine-protein kinase 610 695 - -
Phac8g03776 1075 Gene3D Ribonuclease Inhibitor 37 149 IPR032675 -
Phac8g03776 1075 Pfam Protein kinase domain 768 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03776 1075 Gene3D Ribonuclease Inhibitor 434 531 IPR032675 -
Phac8g03776 1075 Gene3D Ribonuclease Inhibitor 335 433 IPR032675 -
Phac8g03776 1075 SMART LRR_sd22_2 532 558 - -
Phac8g03776 1075 SMART LRR_sd22_2 318 347 - -
Phac8g03776 1075 SMART LRR_sd22_2 270 296 - -
Phac8g03776 1075 SMART LRR_sd22_2 629 654 - -
Phac8g03776 1075 SMART LRR_sd22_2 173 199 - -
Phac8g03776 1075 SUPERFAMILY RNI-like 82 395 - -
Phac8g03776 1075 Gene3D Phosphorylase Kinase; domain 1 742 838 - -
Phac8g03776 1075 ProSiteProfiles Protein kinase domain profile. 765 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03776 1075 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Phac8g03776 1075 PRINTS Leucine-rich repeat signature 417 430 - -
Phac8g03776 1075 PRINTS Leucine-rich repeat signature 629 642 - -
Phac8g03776 1075 ProSitePatterns Protein kinases ATP-binding region signature. 771 794 IPR017441 GO:0005524
Phac8g03776 1075 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 734 838 - -
Phac8g03776 1075 FunFam Leucine-rich receptor-like protein kinase family protein 35 193 - -
Phac8g03776 1075 FunFam Leucine-rich receptor-like protein kinase family protein 337 609 - -
Phac8g03776 1075 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Phac8g03776 1075 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 487 1041 - -
Phac8g03776 1075 Gene3D Transferase(Phosphotransferase) domain 1 839 1052 - -
Phac8g03776 1075 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 839 1057 - -
Phac8g03776 1075 Pfam Leucine rich repeat 464 523 IPR001611 GO:0005515
Phac8g03776 1075 Pfam Leucine rich repeat 610 665 IPR001611 GO:0005515
Phac8g03776 1075 Pfam Leucine rich repeat 320 379 IPR001611 GO:0005515
Phac8g03776 1075 SUPERFAMILY Protein kinase-like (PK-like) 757 1041 IPR011009 -
Phac8g03776 1075 SUPERFAMILY RNI-like 287 608 - -
Phac8g03776 1075 SMART serkin_6 765 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03776 Phac-Chr8 43971955 43976183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03776 31 1070 Receptor kinase-like Gene Family AT5G56040 64.723 0.0 1342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac8g03776 Pkinase 9.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03776 - - gmx:100813139 1807.34