Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03773 ATGGATAGGGAAAAGTACGAGAAGGTACTTGAAGCGTGTTCCCTGAAGAAGGATCTGGAGATTTTGTCATTTGGTGATCAGACAATTATAGGAGAGCGTGGAATAAATTTGAGTGGTGGACAAAAACAAAGAATACAAATTGCACGTGCACTTTACCAAGATGCTGATATATATCTATTCCATGATCCTTTCAGTGCTTTGGATGCTCACACAGGCTCTCACCTCTTCAAGTACACATCTCATTTTGAGTTCAGCAAATTTTGTTTTTCGTTCATTCTAATTGCCATGTTGTCTCTTTTCTTGCCCCTTTCCCACATACACCTTTCTAAAGATGTTCTCCTCCAACCCCTTTTTCTTCATGGCTTATCCGGCTTCCTCCACCTTCTGTTGCTTGTCGCGGTTTCATTGTCATGGGTTTGGAAGAAATTCACGACACGTGTCAGGGATGAGTCTAAGGAGAAGCTCGACAACACCCTCATTAAAACGACCGTGTTTGTTTCTCTGGGTGTTTCTGCTTTCAGTTTTCTCCTCTGTTTGTTCAATTACTTCTACTGGTACTCTAGTGGCTGGTCAGAGGAAGAGCTCGTGACCCTTTTGGATTTGGTGCTCAAAACAGTTGCGTGGGGGGTTGTTTGTGTTTGCTTCAACAAGGGGTTCTTCAGTTCAGCCGAAAGAAGGTTCTCATTCCTCTTCAGAGCTTGGTGCGTCTTGTACCTCTCTGTTTCTTGCTATTGCTTCGTGGTGGACATTGTTGTTATATCAGAGAGACGCGTTGCTTTGCCAACTCAGTACTTGGTTTCTGATGTGGTTTCCACTTGTTTTGGTATGTTATTATGTTACGTGTGGTATTTTGTGAAAAACCAAGGCCACGTTCGAGAAAAAGAAAACAACGGTATTCAGGAACCTCTTTTGAATGGTGGCGCAAATGATGGTGATGCCTTGAGATCAAAAGGGACCAGGGGTGGGGACACTGTTACCCCTTTCTCATATGCTGGCATTCTGAGCCTTTTTACCTTCTCTTGGGTGGGTCCTCTTATAGCTGTTGGCTATAAGAAGACCCTGGACCTTGAGGATGTTCCTCAACTAGACAGCAGAGACAGTGTTGTTGGAGTTTTTCCTGGGTTCAGAGATAAACTTGAGGCTGATTGTGGCACAATAAATAGTATCACCACACTTAAGTTGGTGAAGTCGTTAGTGATGTTAGCGTGGAAGGAGATTCTTTTCACAGCTTTTCTTGCAGTGTTAAGCACTTTGGCTTCTTATGTTGGTCCTTATCTTATCGACAGTTTTGTTCAGTACCTTGATGGACAACGGCTATATGAAAACCAGGGCTATGTTTTGGTCTGTGCTTTTCTCTTTGCAAAGATTGTAGAGTGTCTGACACAAAGGCATTGGTTCTTTAAGGTGCAGCTAGTTGGACTTCGAATTCGTGCACTACTTGTCACGATGATCTATAACAAGGCTCTGACCCTTTCTTGTCAGTCAAAGCAGGGTCAGACTTCTGGAGAAATAATCAATTTCATGACTGTTGATACTGAAAGAGTTGGTGCATTCACTTGGTATATGCATGATTTGTGGATGGTGGCTTTGCAAGTTACATTGGCCTTGTTGATTTTGTATAAAAATCTTGGGCTGGCTTCAATTGCTGCTTTTGTTGCAACTATCCTTGTTATGCTGGCAAATGTTCCCTTGGGATCATTGCAAGAGAAATTTCAGAAGAAGTTGATGGAGTCGAAGGATGCAAGAATGAAGGCCACGTCCGAGATTTTAAGGAATATGAAGATTCTCAAACTACAAGGATGGGAAATGAAGTTTCTAGCAAAAATAACCGAGCTCAGGAAAACTGAGCAAGGCTGGTTAAAAAAGTTTGTCTATACTGCAGCCATGACCACGTTTGTGTTTTGGGGTACCCCCACATTTGTATCTGTGGTTACTTTTGGTACTTGTATGATTATAGGGATCCCCCTTGAATCAGGGAAGATATTGTCTGCACTTGCCACATTCCGAATTCTCCAAGAACCCATTTATAGCCTTCCAGACTCAATTTCGATGATAGCACAAACTAAAGTGTCTCTTGATAGGATTGCATCATTCCTTCGTCTGGATGACTTACCCTCTGATGTTGTAGAGAAGCTTCCCCGTGGTACTTCTGATTCAGCAATTGAAGTGGTTGATGGAAACTTTTCTTGGGAATTATCTTCCCCTAACCCAACATTGCAAAATATAAATCTTAGAGTTTTTCACGGGATGAGGGTGGCAGTTTGTGGTACTGTTGGATCAGGCAAATCTACTTTACTTTCCTGTGTGTTGGGAGAAGTACCTAAGATATCAGGCATCCTTAAGGTTTGTGGAACAAAAGCCTATGTTACTCAATCTCCATGGATACAAAGTGGTAAGATTGAGGATAATATATTGTTTGGTAAACAAATGGATAGGGAAAAGTACGAGAAGATACTTGAAGCGTGTTCCCTGAAGAAGGATCTGGAGATTTTGTCATTTGGTGATCAGACAGTCATAGGAGAGCGTGGAATAAATTTGAGTGGTGGACAAAAACAAAGAATACAAATTGCACGTGCACTTTACCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCAGTGGATGCTCACACAGGCTCTCACCTCTTTAAGGAATGCTTGTTGGGCCTTTTAAGTTCAAAGACAGTGGTTTATGTCACTCATCAAGTAGAGTTCTTACCTGCTGCAGATCTTATAGTGGTCATGAAAAACGGGAAAATTACTCAATGTGGAAAGTATGGTGATCTGCTTAATAGTGGAGCTGATTTTATGGAACTTGTTGGTGCACACAAAAAGGCTTTGTCTACACTAGATTCATTAGATGGAGCAACAGTATCTAACGAAATAAGCACCTTGGAACAAGATTTAAATGTCGCTGGCATGCACGGTTTTATAGAGGAGCCAAGCAAAGATGAACAAAATGGTGGAACAAACAACAAAAGTGAACCTCAAGGCCAACTTGTTCAGGAAGAAGAAAGGGAGAAAGGTAAAGTTGAGTTTTCAGTCTATTGGAAATGTATCACGACAGCATATGGAGGAGCTCTTGTGCCATTCATATTGTTGGCTCAGATTCTTTTTGAAGGTCTTCAAATCGGAAGCAATTATAGGATGGCTTGGGCGACCCCCATCTCAACGGATGTGGAACTACCTGTTGAAGGAACTACTCTTATTGTGGTTTATGTTTATTTGGCCATTGGAAGTTCTTTCTGCATCCTTGCCAGAACAATGCTTCTTGTTACAGCTGGTTATAAGACAGCTACTATTCTCTTCAATAAAATGCACTTCTGTATTTTCCGTGCTCCAATGTCATTTTTCGATTCCACTCCAAGTGGGCGAATCCTTAATAGAGCTTCAACATATCAGAGTGCATTGGATACAGAGATTCCTTATCAAATTGCATCATTTGCCTTCATTGTGATCCAACTTCTGGGAATTATAGGAGTGATGTCTCAGGCTGCATGGCAAGTTTTCATTGTCTTTATACCTGTAATTGCAGTCAGCTTCTGTTATCAGCAATATTATATTCCATCAGCTCGAGAACTGTCACGTCTAGTTGGCGTCTGCAAAGCCCCAAACATTCAACACTTTTCTGAAACAATTTCTGGTACTTCAACCATTAGAAGCTTTGATCAGCAATCAAGATTTCAGGAAACAAATATGAAGCTGACCGATGGGTATTCTCGGCCAAAGTTTAATATTGCTGGTGCTATGGAATGGTTGTCCATACGCTTAGAAATGTTGTCTTCTATCACATTTGCCTTTTCCTTAATATTTTTAATATCTATTCCAGCGGGATTCATAGATCCAGGCCTTGCTGGTTTAGCGTATACTTGTATTCCTAGTGAACCTCCCCTTGTTGTAGATGAAAATCGGCCAGATCCTTCTTGGCCCTCAAATGGCGAGGTTGAAATTCAAGATTTGCAGGTTCGTTATGCTCCACATCTTCCACTTGTGCTGCGTGGTATTACGTGCAAATTTCCTGGAGGACTGAAAACGGGCATTGTTGGGAGAACAGGAAGTGGTAAATCCACTCTCATACAAACGCTTTTTCGAATTGTTGAGCCTGCTGCCGGGCATATTATGATTGACAACATCAACATCTCTTCCATTGGACTTCATGATTTGAGGTCTAGACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACAGTAAGAAATAATTTGGACCCCCTGGAAGAATACACTGATGATCAAATTTGGGAGGCCTTGGATAAATGTCAACTTGGAGACGAACTTAGAAAGAAGGAAGGAAAGCTCGACTCCAAAGTTAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGACAGTTGGTCTGTCTTGGAAGGGTTGTGCTTAAGAAAAGCAAGGTTTTGGTTCTTGATGAAGCCACTGCATCTGTGGATACAGCTACGGATAATTTGATTCAGCAAACTCTTAGGCAACATTTCACTGACTCCACAGTTATTACCATTGCACATCGAATAACTTCAGTTCTTGACAGTGATATGGCTCTGCTTCTTAGTCAAGGACTTATTGAGGAGTATGACACCCCAACGAGGTTGCTAGAGAACAAGTCATCATCTTTTGCTCAACTTGTTGCTGAGTATACCGTGAGGTCCAACTCCAGTATGGAGAAAGCCGATGATCACTGA 4704 0.4158 MDREKYEKVLEACSLKKDLEILSFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFHDPFSALDAHTGSHLFKYTSHFEFSKFCFSFILIAMLSLFLPLSHIHLSKDVLLQPLFLHGLSGFLHLLLLVAVSLSWVWKKFTTRVRDESKEKLDNTLIKTTVFVSLGVSAFSFLLCLFNYFYWYSSGWSEEELVTLLDLVLKTVAWGVVCVCFNKGFFSSAERRFSFLFRAWCVLYLSVSCYCFVVDIVVISERRVALPTQYLVSDVVSTCFGMLLCYVWYFVKNQGHVREKENNGIQEPLLNGGANDGDALRSKGTRGGDTVTPFSYAGILSLFTFSWVGPLIAVGYKKTLDLEDVPQLDSRDSVVGVFPGFRDKLEADCGTINSITTLKLVKSLVMLAWKEILFTAFLAVLSTLASYVGPYLIDSFVQYLDGQRLYENQGYVLVCAFLFAKIVECLTQRHWFFKVQLVGLRIRALLVTMIYNKALTLSCQSKQGQTSGEIINFMTVDTERVGAFTWYMHDLWMVALQVTLALLILYKNLGLASIAAFVATILVMLANVPLGSLQEKFQKKLMESKDARMKATSEILRNMKILKLQGWEMKFLAKITELRKTEQGWLKKFVYTAAMTTFVFWGTPTFVSVVTFGTCMIIGIPLESGKILSALATFRILQEPIYSLPDSISMIAQTKVSLDRIASFLRLDDLPSDVVEKLPRGTSDSAIEVVDGNFSWELSSPNPTLQNINLRVFHGMRVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVTQSPWIQSGKIEDNILFGKQMDREKYEKILEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADLIVVMKNGKITQCGKYGDLLNSGADFMELVGAHKKALSTLDSLDGATVSNEISTLEQDLNVAGMHGFIEEPSKDEQNGGTNNKSEPQGQLVQEEEREKGKVEFSVYWKCITTAYGGALVPFILLAQILFEGLQIGSNYRMAWATPISTDVELPVEGTTLIVVYVYLAIGSSFCILARTMLLVTAGYKTATILFNKMHFCIFRAPMSFFDSTPSGRILNRASTYQSALDTEIPYQIASFAFIVIQLLGIIGVMSQAAWQVFIVFIPVIAVSFCYQQYYIPSARELSRLVGVCKAPNIQHFSETISGTSTIRSFDQQSRFQETNMKLTDGYSRPKFNIAGAMEWLSIRLEMLSSITFAFSLIFLISIPAGFIDPGLAGLAYTCIPSEPPLVVDENRPDPSWPSNGEVEIQDLQVRYAPHLPLVLRGITCKFPGGLKTGIVGRTGSGKSTLIQTLFRIVEPAAGHIMIDNINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDDQIWEALDKCQLGDELRKKEGKLDSKVSENGENWSMGQRQLVCLGRVVLKKSKVLVLDEATASVDTATDNLIQQTLRQHFTDSTVITIAHRITSVLDSDMALLLSQGLIEEYDTPTRLLENKSSSFAQLVAEYTVRSNSSMEKADDH* 1568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03773 1567 Gene3D ABC transporter type 1, transmembrane domain 972 1294 IPR036640 GO:0005524|GO:0016020
Phac8g03773 1567 MobiDBLite consensus disorder prediction 986 1000 - -
Phac8g03773 1567 SUPERFAMILY ABC transporter transmembrane region 398 707 IPR036640 GO:0005524|GO:0016020
Phac8g03773 1567 FunFam ABC transporter C family member 10 390 703 - -
Phac8g03773 1567 Pfam ABC transporter 1334 1482 IPR003439 GO:0005524
Phac8g03773 1567 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 721 944 IPR003439 GO:0005524
Phac8g03773 1567 Pfam ABC transporter transmembrane region 1055 1274 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g03773 1567 Pfam ABC transporter transmembrane region 407 674 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g03773 1567 MobiDBLite consensus disorder prediction 982 1007 - -
Phac8g03773 1567 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1308 1548 IPR027417 -
Phac8g03773 1567 Gene3D ABC transporter type 1, transmembrane domain 386 708 IPR036640 GO:0005524|GO:0016020
Phac8g03773 1567 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1317 1551 IPR003439 GO:0005524
Phac8g03773 1567 Pfam ABC transporter 739 873 IPR003439 GO:0005524
Phac8g03773 1567 FunFam ABC transporter C family member 3 1300 1552 - -
Phac8g03773 1567 Gene3D - 709 958 IPR027417 -
Phac8g03773 1567 Gene3D - 1 95 IPR027417 -
Phac8g03773 1567 SUPERFAMILY ABC transporter transmembrane region 1034 1293 IPR036640 GO:0005524|GO:0016020
Phac8g03773 1567 FunFam ABC transporter C family member 5 706 953 - -
Phac8g03773 1567 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 407 687 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g03773 1567 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 718 943 IPR027417 -
Phac8g03773 1567 FunFam Multidrug resistance associated protein, putative 1 69 - -
Phac8g03773 1567 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 81 IPR027417 -
Phac8g03773 1567 SMART AAA_5 748 921 IPR003593 GO:0016887
Phac8g03773 1567 SMART AAA_5 1343 1536 IPR003593 GO:0016887
Phac8g03773 1567 CDD ABC_6TM_ABCC_D1 408 695 IPR044746 GO:0140359
Phac8g03773 1567 CDD ABCC_MRP_domain1 721 921 - -
Phac8g03773 1567 FunFam ABC transporter C family member 5 994 1294 - -
Phac8g03773 1567 CDD ABC_6TM_ABCC_D2 1031 1290 IPR044726 GO:0140359
Phac8g03773 1567 Pfam ABC transporter 14 64 IPR003439 GO:0005524
Phac8g03773 1567 ProSitePatterns ABC transporters family signature. 846 860 IPR017871 GO:0005524|GO:0016887
Phac8g03773 1567 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 329 1292 - -
Phac8g03773 1567 CDD ABCC_MRP_domain2 1315 1535 - -
Phac8g03773 1567 Gene3D - 1300 1553 IPR027417 -
Phac8g03773 1567 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1033 1294 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03773 Phac-Chr8 43912156 43941472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03773 721 951 Calmodulin-binding Proteins AT2G36910 29.921 3.40e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03773 - K05666 gmx:100777836 2497.62