LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac8g03756	ATGGCCAACAATAATGTAAAGGAGCCCTTGCTGTCAGGATCACTGGATGAGACTCAAAAGGTTAAACGGCAGTTAAACAGGAGAAGGTTACACCGTTCTAGAAGTGCTCCTCACACAGATGGTGTTCCTTCTGAGACACAAAGCAAAGAATCAACTCCTCAAACTGCATCCATATTTCAGAATTTACACCCAAATTTTAAAAGAGTGGCTATCTACCTAACAGTATATTTAGGTGTAGGTGCTTTGATCTTCTTCCTTGTCAGGGACCAGATTAAGGGGACGAAAACAAATGGAATTCTTGATGCTTTATACTTTACAATTGTTACAATGACCACTGTTGGATATGGAGATCTTGTGCCAAACAGCCACCTAACAAAACTATTTGCATGTGCCTTTGTTTTCTCTGGGATGGCATTGATCGGAATCACTGTAAGCAAAGCAGCAGACTACTTAGTTGAGAAACAGGAAATTTTGCTAGTTAAAGCTATGCACATGCACCAAAAAGTTGGTTTAACTGGAATTTTAAGGGAGCTTGAGACCAACAAAACAAGATACAAACTCTTTGTAGTCTTTTTCCTCCTTTTGATTCTGATCATTGCGGGGATAATTTTTTTGGTCACTGTTGAGAAATTGGATGTTATTGATGCATTCTACTGTGTTTGTTCTACAATCACAACCCTTGGCTATGGAGACAAAAGTTTCTCAACTCAAGCAGGAAGAATATTTGCAGTGTTTTGGATATTGACAGGTACTATTACTTTAGCTCAGTTTTTCCTCTACATTGCAGAGCTAAACAGTGAAATCAGACAAAAGGAGCTTGTGAAGTGGGTGCTTACAAGGAAAGTGACCAATTTAGATTTGGAGGCTGCAGATCTTGATGAGGATGGGAGAGTTGGGTTAGTTGAGCATTCTTTCAAAGTCATATATATTATCATGCAATCAATGATAAAAGCATGGTTTCATTCATTTTGTTATCTGTTTTGTTTCTCATAG	993	0.3827	MANNNVKEPLLSGSLDETQKVKRQLNRRRLHRSRSAPHTDGVPSETQSKESTPQTASIFQNLHPNFKRVAIYLTVYLGVGALIFFLVRDQIKGTKTNGILDALYFTIVTMTTVGYGDLVPNSHLTKLFACAFVFSGMALIGITVSKAADYLVEKQEILLVKAMHMHQKVGLTGILRELETNKTRYKLFVVFFLLLILIIAGIIFLVTVEKLDVIDAFYCVCSTITTLGYGDKSFSTQAGRIFAVFWILTGTITLAQFFLYIAELNSEIRQKELVKWVLTRKVTNLDLEAADLDEDGRVGLVEHSFKVIYIIMQSMIKAWFHSFCYLFCFS*	331

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac8g03756	330	MobiDBLite	consensus disorder prediction	39	54	-	-
	Phac8g03756	330	SUPERFAMILY	Voltage-gated potassium channels	162	264	-	-
	Phac8g03756	330	PRINTS	Two pore domain K+ channel signature	108	136	IPR003280	GO:0005267\|GO:0016020\|GO:0071805
	Phac8g03756	330	PRINTS	Two pore domain K+ channel signature	225	234	IPR003280	GO:0005267\|GO:0016020\|GO:0071805
	Phac8g03756	330	FunFam	Two-pore potassium channel 1	167	275	-	-
	Phac8g03756	330	Gene3D	-	63	157	-	-
	Phac8g03756	330	MobiDBLite	consensus disorder prediction	1	54	-	-
	Phac8g03756	330	FunFam	Calcium-activated outward-rectifying potassium channel 1	63	158	-	-
	Phac8g03756	330	Pfam	Ion channel	193	264	IPR013099	-
	Phac8g03756	330	Pfam	Ion channel	71	152	IPR013099	-
	Phac8g03756	330	Gene3D	-	167	277	-	-
	Phac8g03756	330	SUPERFAMILY	Voltage-gated potassium channels	66	168	-	-
	Phac8g03756	330	PANTHER	POTASSIUM CHANNEL, SUBFAMILY K	69	297	IPR003280	GO:0005267\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac8g03756	Phac-Chr8	43815283	43818428	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac8g03756	53	302	Ion Channels	AT5G55630	66.000	7.98e-122	353

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac8g03756	K05389		-	gmx:100777388	468.003