LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac8g03744	ATGTCCATGGTTGTCTTCTTCATCTTCATGCTGTTCTTCGCCGCCTTGTGTGACGTCACAGCCACAGAAAATAACGTCAGCTTCTCATTCCCTTCTTTCACTCTCAACAACACCAACTTCACCCTTCTCGCCGATTCCTCTCTATGTACCAACGGCGTCGTAAGACTCACCAACGCCGCCCCCACTTCCAGCTCCGGCGCCGTCATCTACACCTACCCCATCCCACTCTTCCACCCTCCAACCGCCACCTTCGCCTCCTTCTCCACCACCTTCTCCTTCTCCATCAACAACCTCAACCCCACCTCCTCCGGCGACGGCCTCGCCTTTTTCCTCTCCCCCAACCTCTCCTTCTCCGCCCCACTCGGCCTCCCCTCCTCCTTCGTCGCCGTCGAGTTCGACACGCGCCTCGACTCCCGCTTCGACGACCCCAATGAGAACCACGTCGGCTTCGACGTCGACGCCATGAAGTCCCTCAAAACCGGTGACCCCATCTTGCACGGCATCGACCTCAAGAGCGGCAACACCATCATCGCATGGATCGACTACAACGCCGATCGAACTCTGGTCACCGTTTTCTTGAGCTATTCACTTCCAAAACCCGTCGACCCTGTTCTCTCCGTCAAGTTCAATCTTTCTAAACACTTGAGAAACCCCGTCTACGTTGGATTCTCCGCTTCCACTCCAGGAATCACCGAGATTCATCAAATCCATAGTTGGACCTTTCGCAGTGCTTTTGCTCCCGCAAGAACGAGGTTGCCCCCTCACAACGTTTCCGTGGTGGGAACTGTTCCTGTTTCTGGTTCAGGTTCAGGTTCTGCTTCTGTTTCTAATTCAAGCACTGATTCTACTTCCAAGAAGCGTGACAAGGGGGCTGGCATTGGTGTGCTTGTTGCGGGTTCAGTTGCTTTCTTTGTGGTTTTTTCAATCTTGGGTTATGTTTTTGTTCGGAGACAGAGGGGTGGGAGAACAGAGGATTTTCAGAATGGTTTCGTGGCGTGTCCGAGGGCGTTTGATTACAGAGAGTTGAAGTCTGCGACAAGAGACTTTCACCCGAGTAGGATTGTTGGACATGGATCATTTGGGACGGTGTACAAGGCTTTCTTTATCTCTTCTGGAACCATTGCTGCAGTGAAAAGGTCGCGGCACTCTCACGAAGGGAAAACAGAGTTTCTGGCCGAACTCTCCATCATAGCTGGTTTGCGCCACAAGAATTTGGTTCAGCTGCAAGGATGGTGTGTTGAGAAGGGGGAGTTATTGCTGGTGTATGACTTCATGCCCAATGGAAGCTTAGACAAGATGCTTTACAAGGAACCTGAAAGGGGGAGGTTGTTGAGTTGGTCCGACAGGGTGAACATTGCTCTTGGGTTGGCCTCTGTTCTGGTTTACCTTCACCAAGAATGTGAGCAGAGAGTGATTCACAGGGACATCAAGGCTGGGAACATATTGCTGGATGGAAACATGAACCCTAGGTTGGGGGATTTTGGATTGGCAAAGCTGATGGATCATGACAAGAGTCCAGTCTCCACTTTGACTGCTGGAACAATGGGGTACCTTGCACCAGAGTATCTTCAGTACGGAAAAGCCACTGAAAAGTCTGATGTTTTCAGCTATGGGGTGGTGGTGCTTGAAGTGGGGTGTGGGAGGAGGCCAATTGAGAGAGAAGGGACGAAGATGGTGAATCTGATTGAGTGGGTTTGGGGGCTGCACCATGAGGGGAAGGTGGTTGAAGGTGCTGATAAGAGGTTGAATGGGGAATTTGAGGAAGAGGAAATGAGGAAGCTTTTGCTCTTGGGATTGAGTTGTGCTAACCCTGATAGTGCTGAGAGGCCTTCCATGAGAAGGGTGCTTCAGATTCTGAACAATGAAGCTCCACCACTTTTTGTGCCAAAAGTTAAGCCTACACTCACCTTTTCTTCTGACCTTCCCCTCACCATTGAAGACATTATGTCTGATGGTGAAGAGTTCAGTACCAGCCAATCTATGTGTGAGATCAAAATCAACTGA	2004	0.5075	MSMVVFFIFMLFFAALCDVTATENNVSFSFPSFTLNNTNFTLLADSSLCTNGVVRLTNAAPTSSSGAVIYTYPIPLFHPPTATFASFSTTFSFSINNLNPTSSGDGLAFFLSPNLSFSAPLGLPSSFVAVEFDTRLDSRFDDPNENHVGFDVDAMKSLKTGDPILHGIDLKSGNTIIAWIDYNADRTLVTVFLSYSLPKPVDPVLSVKFNLSKHLRNPVYVGFSASTPGITEIHQIHSWTFRSAFAPARTRLPPHNVSVVGTVPVSGSGSGSASVSNSSTDSTSKKRDKGAGIGVLVAGSVAFFVVFSILGYVFVRRQRGGRTEDFQNGFVACPRAFDYRELKSATRDFHPSRIVGHGSFGTVYKAFFISSGTIAAVKRSRHSHEGKTEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGRLLSWSDRVNIALGLASVLVYLHQECEQRVIHRDIKAGNILLDGNMNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKSDVFSYGVVVLEVGCGRRPIEREGTKMVNLIEWVWGLHHEGKVVEGADKRLNGEFEEEEMRKLLLLGLSCANPDSAERPSMRRVLQILNNEAPPLFVPKVKPTLTFSSDLPLTIEDIMSDGEEFSTSQSMCEIKIN*	668

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac8g03744	667	MobiDBLite	consensus disorder prediction	265	288	-	-
	Phac8g03744	667	Gene3D	Transferase(Phosphotransferase) domain 1	425	624	-	-
	Phac8g03744	667	PANTHER	-	39	624	-	-
	Phac8g03744	667	MobiDBLite	consensus disorder prediction	265	281	-	-
	Phac8g03744	667	SMART	serkin_6	349	627	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac8g03744	667	CDD	lectin_legume_LecRK_Arcelin_ConA	26	243	IPR001220	GO:0030246
	Phac8g03744	667	FunFam	L-type lectin-domain containing receptor kinase VIII.1	425	637	-	-
	Phac8g03744	667	ProSiteProfiles	Protein kinase domain profile.	349	627	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac8g03744	667	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	471	483	IPR008271	GO:0004672\|GO:0006468
	Phac8g03744	667	ProSitePatterns	Legume lectins beta-chain signature.	128	134	IPR019825	-
	Phac8g03744	667	SUPERFAMILY	Concanavalin A-like lectins/glucanases	26	245	IPR013320	-
	Phac8g03744	667	SUPERFAMILY	Protein kinase-like (PK-like)	332	642	IPR011009	-
	Phac8g03744	667	Pfam	Protein kinase domain	350	617	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac8g03744	667	Pfam	Legume lectin domain	26	249	IPR001220	GO:0030246
	Phac8g03744	667	ProSitePatterns	Protein kinases ATP-binding region signature.	355	378	IPR017441	GO:0005524
	Phac8g03744	667	Gene3D	Phosphorylase Kinase; domain 1	315	424	-	-
	Phac8g03744	667	Gene3D	-	23	256	-	-
	Phac8g03744	667	CDD	STKc_IRAK	355	621	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac8g03744	Phac-Chr8	43782437	43785010	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac8g03744	3	654	Receptor kinase-like Gene Family	AT5G55830	55.718	0.0	698

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Phac8g03744		Pkinase	7.1e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac8g03744	-		-	gmx:102668712	941.028